Gene PHATR_44137 details

Gene Information

• Locus tag: PHATR_44137
• ID: 7203889
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 1098281
• End bp: 1100512
• Gene Length: 2232 bp
• Protein Length: 537 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002186466
• Protein GI: 219113765

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.128731
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCACCGCAC TGCCAAACTC GTGTGTGCAA AACCAACACC TATCAAGGCC AACACATGTT 
TATGTTCTCC TGTCACCATT TATCGGTTTC TGAGCAATCC TTTTTTTTAC AATATGCCTA 
GCGGCCAGGA TGGGCCGATC AAGGGTACTT CTAAATTGTG GGTATCCTTG TCGACGGTCA 
AGAAAACCCT TTTCGTCTTT GCCTGCCCCT GCCTGCTGGC CTGGTATTTT CATAGTCTCT 
ATTCAAACGC GTCAGAGAAT GCACTGAATC GTTCTACTGA TAATAAATTT CGAATCGGTG 
AATCCGCTTC TCCCGCTCGG AGTTCAGCCT CGGATCTATG CCGCAGAAGC ATTATCCAAA 
GCCTGGGAAT CGAAGCGGGT GAGTTTGGTG AAAAGGAAAT GGAATCGTTC GAGAATGTGT 
CCATTGCCTT ACATCTGAAT GGAGAATCGA AGCATTGCGG AGAAACGAGC TTAATCAAGC 
TCATAGAAAC TCTGTATCAA GCCGCAAACG AAATGGATCA ATGTTCATTC ATATTTGACA 
AGTATGTTGT CGAGGCCGTT TTATCCAGAG CATTTCAAAA TCTTGTCGGA CAAACGTGTT 
ATTCAAGTGA AAAGGATCGG ACTGAAGAGG ACGGACTGTA TGGGTTTTGC GATATGGGCA 
CCAACAAGAC TCCCATATTA GCCGATCACG ATGAGCTAGT TTCGATCGCA TATGGCGGAG 
TAAAATACCT GCCTTGCCAC TTTCATACTC GTCAAGGTCG CCGGATCCAA GGGGTACAAG 
ATCTCGTAAG TGGTTTGACA GACGAAGCTC CTTGTCCCGA TGCTCTTTGC CTCCATCTGT 
ATGCGGTTCA GGCAGGTCGT CACTTTGTTT TTGCTCCAGG AGCCGTCGGC GAAATTATAG 
AGCTGCCTCA CGTTATGGGC GGCAATCCCG AACAGCCTGT TTATCTAAGA ACGCTCTCGC 
TTTCTCCACG TGTATTCGAC ATTGTCAACT TTTTCCGCCT CGAAGAAAGC CAGGATCTTG 
TAGCTCGAGT TTTGAAAGAA GAACGCGAAC TATGGCGTCT GAAGCGATCG ACGACTGGAC 
CCGACTCCTC GAATGTTAAC AAACGCCGCA CGTCAGAGAG CGGATTTGAC ACAAGCAGTG 
AATCGGCGTT GAAGCTAAAG ATGCGTGGCT TTCAGGCTCT CGGGTTTGAT GATTATATCG 
AAACCTATGC TGACGGATTA CAAATGCTTC GCTACAATTT GACAACCGCA TACAACGCTC 
ATCACGACTT TTACGGTGAC ATTTCAGCTG TGACGGGACA TCACAACTTC AATTCTGCTG 
GAGTTGGTGC TGACCGTTTT GCGACAATTT TACTTTATAT GACGGAACAC GGTGAACGTG 
GCGGTGGGGA AACCGTCTTT ACTGAAGCTT GGCCTACTGA ACTCGCTCCA GGCAAGAGAG 
TTGAGCTCCC AGATGTAAGA GCACAGATCC GTCCTCTCGT CTGCGTCTGC ATATTGGGCA 
TGTTATTCTC ACTATATCAT GCTTTAATGT AGGCCATCGA GTCCTTGCGA GCCTCAGGTG 
ATGCGTCCAT GTTGAAGACA GGATCTTGGG AAGAAACTCT GGTATGATTA AGTGGTATGT 
TAAGTTAACC GCTGTGGACC TCTCTCTCAG CTTCTTTTAC TTCTTCTTTG CATGGTAGGT 
TGCGAAATGT CGGTCACGGC TGGCGGTGCA ACCGCACCCC GGACGGGCAG TTTTGTTCTA 
CTCGCAGCTC CCAAATGGAA AACCTGACTA TACGTCGCTA CACGGTGGCT GTCCAGTGTT 
GGCAGGCCAA AAATACGCAG GTATGTACTT GGGGAGAGGT AGGAACAAGT GCTTAATTAC 
TCGAGTCTAC CTACTGACAA GTTGAGATTG CTGCTTCACA TGGCAGCGAA TCTTTGGGTT 
TGGAATTCGC ATCGCCACGG ATACAGCGAA GCTCCTATTC ATCCGTAGAA ACACTGAAGT 
GAAGTAACAT TTGCTTCGCC CATTGAACCA ACTACACCAA TACCATCAAA TATTTCCATT 
TTGAATTGCC AACCCAAGCA GAAAACATGC ACATTCTATC CAAGGGAGGG TATGGTGTTA 
GTGTAGTGTG GTGGGAAAGG TGAAAAACTC CCAAAAGGGG ACGGAATGTG TTCAGTCTAA 
GTAGCATCAT TTGGCGCTTG TATATTGTTA AGTATTCAAA CTGTTTGAAC TAAACGCCCA 
TTTTTTTCCC GG 

 

Protein sequence

MPSGQDGPIK GTSKLWVSLS TVKKTLFVFA CPCLLAWYFH SLYSNASENA LNRSTDNKFR 
IGESASPARS SASDLCRRSI IQSLGIEAGE FGEKEMESFE NVSIALHLNG ESKHCGETSL 
IKLIETLYQA ANEMDQCSFI FDKYVVEAVL SRAFQNLVGQ TCYSSEKDRT EEDGLYGFCD 
MGTNKTPILA DHDELVSIAY GGVKYLPCHF HTRQGRRIQG VQDLVSGLTD EAPCPDALCL 
HLYAVQAGRH FVFAPGAVGE IIELPHVMGG NPEQPVYLRT LSLSPRVFDI VNFFRLEESQ 
DLVARVLKEE RELWRLKRST TGPDSSNVNK RRTSESGFDT SSESALKLKM RGFQALGFDD 
YIETYADGLQ MLRYNLTTAY NAHHDFYGDI SAVTGHHNFN SAGVGADRFA TILLYMTEHG 
ERGGGETVFT EAWPTELAPG KRVELPDAIE SLRASGDASM LKTGSWEETL VAKCRSRLAV 
QPHPGRAVLF YSQLPNGKPD YTSLHGGCPV LAGQKYAANL WVWNSHRHGY SEAPIHP