Gene PHATR_44134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_44134 
Symbol 
ID7204051 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1079790 
End bp1081014 
Gene Length1225 bp 
Protein Length245 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186463 
Protein GI219113759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA AGGTATTGTT GCCGTAGGCG ATACCGTACC AAGCATTGTC GATTGTGGTA 
TCTTGGGCTG TCCACACAAG TGAGATTGCA GTCGAAGGTT CACCCGAGGG TACTGAAGAC
AGTATTGATG ATGGATCTGT TGATGGCAAA GCAGAAAGCG ATGTTGAAGG GCTCGTCGAC
GGTGCCTTTG AAGGCTCCAA GGACGGGAGA GCCGACGGTG TTGATGTGGG AATGCTAGAA
GGAGCAAAAG AGGATTCTGT TGAAGGGCTC GTCGACGGTG CCCTCGAAGG CTCCAAGGAC
GGGAGAGCCG ACGGTGTTGA TGTGGGAATG CTTGAAGGAG CAAAGGAGGG TTCTGTTGAA
GGGCTCGTCG ACGGTGCCCT CGAAGGCTCC AAGGACGGGA GAGCCGACGG TGTTGATGTG
GGAATGCTTG AAGGAGCAAA AGAGGATTCT GTTGAAGGGC TCGTCGACGG TGCCCTCGAA
GGCTCCAAGG ACGGGAGAGC CGACGGTGTT GATGTGGGAA TGCTTGAAGG AGCAAAGGAG
GGTTCTATTG AAGGGCTCGT CGACGGTGCC TTTGAAGGCT CTAAGGACAG GAGAACCGAC
GGCGTTGATG TGGGAATGCT AGAAGGAGCA AACGAGGATT CTGTTGAAGG GCTCGTCGAC
GGTACCCTTG AAGGCCTCAA GGACGGGAGA ACCGACGGCA CTGATGTGGG AATGCTAGAA
GGCGTAGACG GAAACATGGA AGTAGTCGAC AACGGATTTG AGGATGGCGT TGTTGCGATA
AGCACCTGCT CACTTGCCTC AGTTGGGTAA GTTGTAGGCA TTTGAGACGG TTCGTCAAAT
AATCCGTCGG CATGGCCTGT GTCATCAAAA TTAATCACGC TCTTTACTTC TGCTATCGCT
CGCTGCGAAA ACTTGTCGTA AGATATAGGT ATTTTTTCTG TTGTAGCTCT ATCAACAAGT
TTTCGGACAT CGTATCTCTC TATCCATGAA AAAAACAGTG GTTCAATGTC GAAGCATCCC
GTACACCTCA CGCGGGCATC CCAGGACATG ATTGTAAAAT TTCTAAAGAC GCCTTCCTCT
GTTTTCCACG ATATCAGTTT TGCATCAAGT AGCTGTCGCT CATAAAGCTC ACGGCAACGA
CCGGAAACTT CATTGTATAT ATTGACAATC CGCGTCTCGA GAAACAGGAT ATCCTCAGCA
TTAATCGAAT TTACAAGTAA ACCAG
 
Protein sequence
MATKIAVEGS PEGTEDSIDD GSVDGKAESD VEGLVDGAFE GSKDGRADGV DVGMLEGAKE 
DSVEGLVDGA LEGSKDGRAD GVDVGMLEGA KEGSVEGLVD GALEGSKDGR ADGVDVGMLE
GAKEDSVEGL VDGALEGSKD GRADGVDVGM LEGAKEGSIE GLVDGAFEGS KDRRTDGVDV
GMLEGANEDS VEGLVDGTLE GLKDGRTDGT DVGMLEGVDG NMEVVDNGFE DGVVAISTCS
LASVG