Gene PHATR_44133 details

Gene Information

• Locus tag: PHATR_44133
• ID: 7203886
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: +
• Start bp: 1075030
• End bp: 1078470
• Gene Length: 3441 bp
• Protein Length: 1012 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002186179
• Protein GI: 219113191

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGATGACTTC CTAGACACAG CTTGGTGAGG GCACTACAAC AGTAGTACGC TGTTTGGATG 
CGACCTAACA CTGACTGTAA GTAGTAGCCT AGATCTTACA CAAGAGTTTC GCCCGTTGTG 
CCAGTCCTGT CTGTTAGGCA CGACGGTGGG TCCTTAAATC CTCCCGTTTC CAAAGACTTC 
CAAGAGAGCG TATCGGCCTT CGTCATGACA ACAATCCACA TTATTGATAG CTGGGCCGAT 
CTTCTTGGAG GAATCACGCT ATCGGATTGT CGCAACGTCA CTGACCCATC CTGTGTCGGC 
GGGGTTGCGA ATGTTGCCGC CTTTGCGCGG CACTTGACCC GGAGCGGGGC GAGCGTTACC 
GACAGTCCGA GCGGTGGGAC TGCGGAAGAT ATTGAGGAAC CGTACATAGT GACGCCGCGG 
CTCGATCGGT ACTCGCCATT CGTGCAAATG CATCCACTTG GATGGAGTGT GAACCGGTTG 
ATCTTTGTTG AAGTATTGCA ATGGAAATTC TTTATCTCGA GTCCCGCCTT GTTGTATTTA 
AGCAGCACTG CTCGTGGGAG CACTAACGGT AGCAGCACGA TTTCGACGAA CTCCTCGTTG 
ATGTCGGATT TGCAAACGGA CGAGTTGCCC TTCTTACTGA CTAACGTGGC TGTGCCGCCA 
GAGAACGACT GGTACCCCTA CACAAAGGCG ATATACTTTG ACGAAACCAC GCACCTGGCT 
TTTTTGTCGG TCGCGGATTC TGACGAGCCC TTAAATGCGC CGCAGATAGA ATCTGCAACG 
GGAGCCTTGA ATTATATTGC ACGTTTGAAC AAAGAAAGTG ACTGCGATGC ATTTGTTGAC 
GATGGGGGTG GAACTGCGGT AGCCCTGGGG AGTAGCTGGG ACAATCGAAC CTGTTGGATT 
CCAGTGGTTG CCTTTGGTGA TTCGGAAAAT CGATGGAACA ATTTCCTATT GGCGATGACT 
GCATTAGAAA ACCCTCCGTC TCTAATAATG GATATTGAAG GACACGATGC GCGATTTTTT 
ACACCGCAAA AGTACAACCA AACTTGGGTT TCTAGTTACA AAATGAATTC TACGACGTAT 
CGTCAACAAA GCATTGTTCT AGCAGAGGAC AGCCGAACAA TTGTGAGCGT GACGGCGACA 
GCCATACCCC TAAATGAGTT GCCCGACGAG TTCAAAGACA ATATCTACAC ATCCCACGTA 
ACCCGCATGT ACGAGTTGGG GCAGGAAGCG GCAAACAAAG ACCCAATTGT GGGAACAAGT 
ACTTTCATGC CAATTGCTAG AATTGACCAG TATAGACGGT GTATGGGTGG TGAATGCGAG 
ATCGGAAATC TCTTTACAGA TGCTCTGCGA TGGTATTCTA GCGCGGATGT GGCATTTGTT 
TCGAGTGGAG GATTGCGAGG CCAAGGATGG CCGGAAGGAG TTGTTCAAAT GTCCAATTTA 
TGGGAATCAT TGCCGTTTCC GAATACCCTA TGCTCCGGAA CCATGACTGG AGTATCGTTA 
TTCAAGCTGT TCAACTATTC TACTAGTGTT GCAAACTTTG AAGTCAAAGA AACAGTTTCG 
GGGGGACAGC TGCTGCAGGT GTCTGGGGCG CGACTTCGAT ATAATACGAA ACTCCCCCAA 
GGAGCGTCGC GAATGGTTAG GCTGGAGATT TGGGACAAAA ACGCCAATCA GTATGCACCA 
GTGCAACGCC TCCAATTGTA CAAGTTCGCA ACCGATAATT TTTTATGCGA AACCAACATA 
CCGTATCCTG AATTGTTGGG GCAAAATTTT TACATCGATG GGGAAGTTCC GGGTGTTGTG 
CGTGACGATT TACATCAAAA CATTGTTGCG GACTATCTTA CACAATTGAA CACAACTTAC 
CAAGCGACTA TTGAGGGACG ACTCATCAAT GACACTACTG TTCTGGATGC AATGAATTTG 
GTACAGATCG AAGGAGGCTG TGGACAAGGA ACTTATTGGG TTTTTACGCA ACAGAGTTGC 
AAGGTTTGTC CGAATACTGA TCAAGTCTAT TTTGGAAAGA AAGAGCTTGA ATTTGCGAGT 
GAAAGCGGAT CGTCGAAACC TGTTGAGGGG CGTTTCGAGA TACTGAATAA TGCGGGTTTC 
CCTGTATCGG TGGGTCCCAG ATCGTTTCCA TTCTGGGTGA CTTTGACAGT TTTCTTGTGC 
AATGGTACGA TCCCAATTGA TCCAATTCCA GCAGGTGTAA CGCGCGTGTT GCAATCCGGC 
GAGAAATTGA CGGTAGGTTT ATCTATCTCG TCTGAGCAAC TCGAAGCAGG AACAGCGGTT 
GCGACTGGAT CTTTTTCTGT GGTGGATGGC GGGAGCTTTC CTGGATGCAT TGGCAATGAA 
ATTTCTTTTG ACATTCTCGT TCGTGTGGAT CCCAGTCGGG AACTCAATCA GATAGGAGGA 
ATTCGATGGG TTGGCTGGTC GCTATTCATG GTCCTTGTTT TTTCTGCGAT GTTCTTTTAC 
ACTTGGGTAT GCCAGCACGA GCGAATTGCA GTTGTCCGTG CTATGCACCG CTTGTTTCTC 
AACACGGTTT GCCTAGGCAT TGTTGTTTTG GGCTCTGTGT TGATTCCAGT GGGTTTTGAC 
GACGGTGCAT TCTCGGAAAA CATATGCAAC AGCGCGTGTG CTTCAATCCC ATGGATCAGC 
GCAGCAGGGT TGAGTACAAT ATTTGCAGCT ATGTATCGCA AGCTGGGATC GATTGTCGGA 
AAAAATGAAG ATGCTCGTGA ATTTCGTGGT CGCCGTGTTG TTTTAACATT TGCCGTTTTC 
TTTGGCCTAA ATGCGTCGAT TCTAGTGCCT TGGAGTATTT TAGCCCCATT GCACTGGGAT 
CGAACGCCAC TCGTTCAAGA AGAATGGAAG AGCTACGGTC GTTGTTCAAC GAGCGATACG 
TCAAGTTTGG CTTTTGTGGT TATGGCCGGT GTTCTGAATG TGTCGGGATT TGTCTTGATA 
TGCCGGTTGG CTTATAAAGC CCAGCAAATA CAAGATAGAA GGGACCAATT CGACCAGGCC 
AAAAGCATTT CATTGGCCCT GTACAGCTGG ATTCAATTAG CAGTCGTGGG AATTCCTGTT 
CTCTCTCTGA TTAGCGCGGA AACCACTCGT GCTCGATATT TTATGATCGT TGCGCTCATC 
TTCGCCTTGT GTATCTCCAT GCTGCTTAGC TTGTTTATTC CGATGCAAAT GCAGAAAACG 
ATGCAAAGCG TGCGAACATT GAGTTTAGGC AGTCGCTTCC TGAGCTCATT TCGATCTAGA 
TAATCTGCGA CGACACAAGG AGGCGGGAAA CTCAACACAC AGCATTAAGA ATCAAACCGG 
TTTTACATAC CTTCCTTCCG TGCATTGGGG CAACAACCTC GGAGCCGATT CGAATTAGAT 
GACATAAGCG GCACCGTGGA CGACGCAGTC ATTCTGCAGT GTCCGGACCA AGTGCGATCA 
ATTTTCGGAC ATGAGGTTCG C 

 

Protein sequence

MTTIHIIDSW ADLLGGITLS DCRNVTDPSC VGGVANVAAF ARHLTRSGAS VTDSPSGGTA 
EDIEEPYIVT PRLDRYSPFV QMHPLGWSVN RLIFVEVLQW KFFISSPALL YLSSTARGST 
NGSSTISTNS SLMSDLQTDE LPFLLTNVAV PPENDWYPYT KAIYFDETTH LAFLSVADSD 
EPLNAPQIES ATGALNYIAR LNKESDCDAF VDDGGGTAVA LGSSWDNRTC WIPVVAFGDS 
ENRWNNFLLA MTALENPPSL IMDIEGHDAR FFTPQKYNQT WVSSYKMNST TYRQQSIVLA 
EDSRTIVSVT ATAIPLNELP DEFKDNIYTS HVTRMYELGQ EAANKDPIVG TSTFMPIARI 
DQYRRCMGGE CEIGNLFTDA LRWYSSADVA FVSSGGLRGQ GWPEGVVQMS NLWESLPFPN 
TLCSGTMTGV SLFKLFNYST SVANFEVKET VSGGQLLQVS GARLRYNTKL PQGASRMVRL 
EIWDKNANQY APVQRLQLYK FATDNFLCET NIPYPELLGQ NFYIDGEVPG VVRDDLHQNI 
VADYLTQLNT TYQATIEGRL INDTTVLDAM NLVQIEGGCG QGTYWVFTQQ SCKVCPNTDQ 
VYFGKKELEF ASESGSSKPV EGRFEILNNA GFPVSVGPRS FPFWVTLTVF LCNGTIPIDP 
IPAGVTRVLQ SGEKLTVGLS ISSEQLEAGT AVATGSFSVV DGGSFPGCIG NEISFDILVR 
VDPSRELNQI GGIRWVGWSL FMVLVFSAMF FYTWVCQHER IAVVRAMHRL FLNTVCLGIV 
VLGSVLIPVG FDDGAFSENI CNSACASIPW ISAAGLSTIF AAMYRKLGSI VGKNEDAREF 
RGRRVVLTFA VFFGLNASIL VPWSILAPLH WDRTPLVQEE WKSYGRCSTS DTSSLAFVVM 
AGVLNVSGFV LICRLAYKAQ QIQDRRDQFD QAKSISLALY SWIQLAVVGI PVLSLISAET 
TRARYFMIVA LIFALCISML LSLFIPMQMQ KTMQSVRTLS LGSRFLSSFR SR