Gene PHATR_44106 details

Gene Information

• Locus tag: PHATR_44106
• ID: 7203867
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 1002025
• End bp: 1004028
• Gene Length: 2004 bp
• Protein Length: 577 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002186444
• Protein GI: 219113721

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.287897
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTCAGACCCG CTAGTTTGTA CGATGCAAAT CAGCTTCTAG AGAGACGATA CATTGCCGGA 
TTACCAACAC GTACAAAGTG TTAATTGTGT CCATGCCTGA GTGTATCTAG TAGATATAGA 
TACTTTTGGT AGGAAGCTGC CTGCTGCGAC CGCAGAAACG CCTCACTGTC AATCGATATA 
TCCACAGAAT CGAATGTCTA GTACATCGTT AACCGCTCGG GAAAATTGTG ACACAAACGA 
TGTGAACGCT GTAGAGTTTG TAAAAGTGGC CATCGTTGGA GCGGGAGCTT CTGGGCTGCA 
GTGTGCTCAC ACATTAATTC GAGACTTTGG CTTCGCCCCG TCCGATATTG TAATTTTGGA 
AGCGCGTGAA AGAGTAGGAG GTCGCCTTTA CACCACGATG GAAACAAGAA GAGGCCTGGA 
TGGAACTTCG TTGCATTTTG CCATGGATCA CGGTGCGGCA TGGGTACACG GAACTGGCCT 
CGATTGGGAA GCTCCACTGA GTAAAGAAGA TCGCTCCTTC CCTATGAGGA ATCCCATGAT 
GGCGCTCTTG GAAAAAGCTA CACCTTCAGG CGAGTCCGTA TATGAAAGGC ATTTGAACCC 
GATCTTTCTA GGCAATCCTT GGATGCGACC CCAAAGTATA GCGCACGGCG CCAATCAGAT 
CGTTTTGTAT GTAAATGGAC AAGAGCTCGC TAAAGATTCA CCATTGATCT CGTTAGCGCT 
TAAACGCCAT TACGCTCTTT TGGACCGTGT TTCGGATGTT GGTAACACCA TGTTTGAACA 
AGGAGAAGGC ATGGAGACGA CAATTCAAAG CGTGAAAGAA ACAATTTCAA AGATTCAAGA 
CGAGCCAAAT TTTCGATCGG AACTAGAACG TTTGTCCGAG GATGACATGG AACAGGTACT 
TGCTTTAACC CCTTTTTATC TGCACATGAT CGAGTGCTGG TACGGAAAGG AGACTTCGGA 
TTTACAGCTC TGCGAGTTTG TCGATGACAA ACTGAATGAC GATAACGCCG ATGAGACATA 
CACTGCGGAG GGCGACTTTT ATGGACCACA CTGTACCTTG AAGAAGGGTA TGAGTTCGAT 
TTTGGAACCT TTACTACGAG ATGGCGTGAA CAAGCGGATA CGATTGAAAG AGGAAGTCAT 
TAAGATATCC AACGAGACTA ACACCGTCCT TCTAAACACG GTCTTAGGGA CGCAAATCAG 
GGCGAATGCG TGCGTACTAA CCCTCCCAGC TGGTTGTTTG AAAGAGACTG AAGGTAGGTA 
CAAATTCTTT GAACCTGCAA TGAGCGCGAG CAAGCTTGAA GCAATCAGTC ACATGAGCAT 
GGGCAGCTAC AAAAAAGTTT TCTTAACTTT TGATCGTATA TTCTGGCCGA AGGAAGAGGC 
GTTTCTGGGG ATGATCCGTA AAAGCTCTTT CCAGACGTCA GATGAGCCGC CTGGTAACTG 
CATGCTTTTC GACAATTTAT GGGCGCGAAA TGATATTCCT TGCATTGAAG CTGTCCTGTC 
TGGATCTGCC GGAAGCTGGG CCGTCGGAAA AAACGACGAG ATTATTCGAG ACCACGTTCT 
TTCATTTATG AAGGATGCCA TGGGTATCGC TGACGAAATT TCGTCATATT GTCAAGACTG 
TCAAGTCACC CGCTGGGAAG AAGACCCTTA TAGTCGAGGC GCGTATTCAT CGATGTCACT 
TGGAGCGTTG AATCGGCACG TGGAAGAATT GAGAAATCCG GAATGGGAAG GACGCCTCAT 
ATTCTCTGGG GAAGCTACAG TCACAGAGTT TGCAGGCAGC GTACATGCGG CGCTCTTTAG 
CGGACGCAAT TCTGCCGAGA AAGTCAACGA ATATTGTACA CTCGTAGAAG CGAAATTATG 
TTGCTCTCAG CTAGATGATG CGGCTGATAA GATTGGATTC CTAAAGCCGT CGAAACTCAA 
TTGGTAGCAA CTCGTTTGAA AAGAAAGGTG CCTTTCCAGT ACTTCCATTA GTGATAAATG 
TATACTAGCT GGCAGGTTTA TTTC 

 

Protein sequence

MSSTSLTARE NCDTNDVNAV EFVKVAIVGA GASGLQCAHT LIRDFGFAPS DIVILEARER 
VGGRLYTTME TRRGLDGTSL HFAMDHGAAW VHGTGLDWEA PLSKEDRSFP MRNPMMALLE 
KATPSGESVY ERHLNPIFLG NPWMRPQSIA HGANQIVLYV NGQELAKDSP LISLALKRHY 
ALLDRVSDVG NTMFEQGEGM ETTIQSVKET ISKIQDEPNF RSELERLSED DMEQVLALTP 
FYLHMIECWY GKETSDLQLC EFVDDKLNDD NADETYTAEG DFYGPHCTLK KGMSSILEPL 
LRDGVNKRIR LKEEVIKISN ETNTVLLNTV LGTQIRANAC VLTLPAGCLK ETEGRYKFFE 
PAMSASKLEA ISHMSMGSYK KVFLTFDRIF WPKEEAFLGM IRKSSFQTSD EPPGNCMLFD 
NLWARNDIPC IEAVLSGSAG SWAVGKNDEI IRDHVLSFMK DAMGIADEIS SYCQDCQVTR 
WEEDPYSRGA YSSMSLGALN RHVEELRNPE WEGRLIFSGE ATVTEFAGSV HAALFSGRNS 
AEKVNEYCTL VEAKLCCSQL DDAADKIGFL KPSKLNW