Gene PHATR_44062 details

Gene Information

• Locus tag: PHATR_44062
• ID: 7204013
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 844734
• End bp: 852613
• Gene Length: 7880 bp
• Protein Length: 1943 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002186422
• Protein GI: 219113677

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.284084
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TATCTGTACC GAACAACACT CGGTGGCCAC AAAAGCTCGA TTCGGCGCCA TCGAAAAAGT 
GGTTCTGAAG TCTATGACTG GAGACACATC GATTGTACCG TGTAGAGATG GGCGTTCACG 
GCTGGAATTG GTTTCTGAAG GAGGAAGGAT GGTTGCCGGA TACGCGGCAA TCGTGTTGCT 
CACAGTCATT GTGGAGGAAT CCCTCCAGCT TGAGTGAATC GGATGCGTTC GCATCGCGGA 
TCGTTCCCAT TCCGGACCGC TCCGTGTTGC ATGTTGATGG AAACGGCTTG GCATTTTTCT 
TGCATCGTGC TGCGTACGCG CGCCACCTCG CGAAGGTGAT CAAAGGCGGA AATAACAAGC 
AATTGCGGGC GCACTCTAAA GCTTGCACAG TGCCCAAACA ATCCTTGTCG ACCGAGCAAG 
TGCGTCGGCT TTTGCCCAAC TTTATGCCTC TCACGCTACT ATCGGATGCT GTTCGGGAGT 
TTGCGTCTCA ACTGCAGGAT AAGCACGGCA TGAAGTTGTT GGTGTACTGG GATGGTGAAC 
AACGGCGAGT TTTCAAGCAC GAGACGGATA AACATCGTCA GACGCGTCGA CCCGAGGAAT 
GGTCCAACGT TCAGCACTAC TGCCAGTACG GCATGATGCC AGCGTCGAAA ACAATTTGTG 
AATGGGAGTA CGTGTTTCCA AAGAGCCGAC TATTCACCAC GCAGATTATG AACGTACTAC 
AAACCTGTGG TGCAGAAACG ATTCATTGCG AAGAAGAGGC CGATCACATT ATCGCCGAGC 
GGGCTTCCAA CAACCCGAAC CACTATGTTC TCGGCAACGA CTCAGACTTT TGCTTTTTTC 
CGAACGTGAA CTATATTCCG TTCGCGACGC TGGATGCACA ACACAACACG ACCACGGCCT 
GTGTTATTCG TCGAGCAGAG ATTGCGGAAT CCATTGGTCT TCCGGAGGAG CTCATGGTTG 
AGTTAGCCAT CCTAATGGGG AACGATTACG TGGACCCTCG AGGCGCCAAG CTGAATTTCC 
ATTCTCGCAA TGTTTACGAT CTAGTGGAGC ATCTTCGGGA TCAGGTGGAG AGTTATCGAG 
TCACTAGCCA GGTGGCCGAG ATTGAGGAGG CTCTGCGCTT TATCCGGATT CTCTACAACT 
TTGGTGATTT GTCGGAATTT CCGTTCGACG AACGTGACTC GGCTGGCCGG GTCATTGATG 
AGAACGATAT GGCCTGTGAT AGCATTTTGG ATAACATAGC TCTGCGTCCG ACGATTCCAG 
ACGAGGTTCC TCTCGAATTG GCAAAACTTC GTCCTTTCTC AGATATCTCC ATAAAGGACG 
CCGCTCTCCC TGTTTACAGA CTTTTGTTGA TCAAAGTGCT GGTAACGAAG CAAATTCCGC 
GATGACAATG ATTCGACAGG AGCATCTGGA TGTTTTTCGG GATATGGCTC TGACAAAATG 
CGCGAGTCCC GGGATTCAAA AAGGAGCCTG GCGTCCTCTA TGGGAAGATG TACCGGCGGC 
ATATTTGATT GAAAAGATTG TTGCTCATTC CTTTGAGGAA AGTGGCGAGT CTCCTGTAGT 
GCGGGTCTAC GATCCCTTTC AGATATTTGA TCAACATATA TTTCATGATT GTTTACGCCA 
GCGAAGGGCA CATGAAAGGA CGCGAAAGAA AGACCCTGTG TCTAAAGCGG TCGAACCTTC 
GATCAAGCCA AGAACATCAA CAGGGGAAGA GCGATTAGTT CTTCCGGTCG ATGAACACGA 
GGAAATCATT CTTGCATCGG TGCGCACGAA TCGAGTAACT ATTATTCAAG GTGAAACTGG 
ATGTGGGAAG TCATCTCGCA TCCCGATTAT GCTTCTGAAA GCACCGTGCC CGATCCCGAC 
GATGAATCAG TCGAAAATGT ACATTTCCCA GCCTCGTCGC ATCGCAGCGA AAGCACTAGT 
CGAGCGAGTT CGATCTGTCG AGCCGGAGTT AAAGAATGCC ATCGCTTTGC GAATGGGGCA 
TGGAGTTTGC GAATACGAGT CAAAGAAAAC AAGGGCATGG TTCGTAACAA CTGGATACCT 
TGTACGAGTG TTGGCGAATC ATCCTGAAAA ATTTGATCGC ATCTCGTATT TGGTAATTGA 
TGAGGTACAT GAGCGTTCGG TTGATACCGA CATACTTTGC CTTCTCTGTC GTCGTCTGCT 
AAAAGTTAAC CAAAACATTC GTCTGGTTTT AATGTCAGCA ACACTGGCTG CGTCTCTCTA 
TCAGGAGTAC TTCAATACCA CTGAGCCCCC AATTAAAGTA GGGGCTCGTC GGTTTCCCGT 
CAAGGAGGTT TTCCTGGAAG ACCTGCAAGA ACAGGTGGCA TTTTCGCAAA AGGAGGAGAA 
GACAGTGAAT CAACTCGCAA GCGAGTGCAA CAAAATGAAA TGTGCGAAGC CACCATCACT 
GAGCTACATG GAAAAAATTT TCTCTCTTGT TTCGCATATC GCCATGTTTG TAGGTCGACC 
TGGATCTTCA GTACTCATAT TTGTTCCTGG AATGAACGAA ATCGTCGCCA TTACCGAGCT 
TGTGGAACAG CTATTTAAAC CGGGCGTCAG GTTCACTTGC TTTCCGATCC ATAGTGATAT 
TCCGTTTGAA GACCAGATGA TTGTTTTCGA TGCTACTGCA GAAGATGAGG TACGTGCTTC 
GAGGCAGTTC TTGATGGTGT CATTAATGCC GAGTCCTCAT TAAACCACAT ACAGGTCAAA 
ATCATTATCG CAACAAATGC TGCAGAGAGC TCGGTAACGC TTCCTGATGT TGATCATGTC 
ATCTGTCTAG GGCTTTGTAA ACAAATCGTG TACAACGAAG CTTCGCACAG ACAGATTTTG 
ATGCCTACAT GGATATCGAA AGCGAGTGCA ACGCAAAGGG CTGGACGAAC AGGCCGACTC 
CGACCTGGAA CTGTTTATCG TATGTACACT CGAGAAGTTT ACCGTCATTA CATGGATGAT 
TTCGAACCAG GGGAGATGGT CAGAATTCCT CTTGATTCCG TCATTCTCAT GTTGAAAGAA 
ATGCTGTCCG ACGAGGACGT CACAAAAGTG CTCCTGGATT GTCTTGAACC GCCCAACATT 
GCAACAATCG ACCGCTCATT TCAAAGCCTC TACAAGTGTC GATTTATCAC TTCGGCAGAA 
GGCGACTGCG AGATTACCTC ACTTGGATCA TTCGTTTTGG CTATGGGAGT TGATCTTTTG 
CTCGGGTCGC TTGTTGGTCT TGGTATACAG TTTGGAGTAG GCGCTGAAGC TGTTCAGATG 
GCCGCCGTTC TTTCCTTTCC CAAAACTCCG TGGATTATGT CAAACCCTCT GATTCATGAA 
AGTAAGGATT ACAACGAAAT GACCACAAAA ACGTACGTGT CCCGGTGCCA TTTCGACGCA 
AACCTTTTCT CTGAGCCCTT GTCGGCGATG AATCTAATTT GGGAATTTGA ACAAGCAAAA 
AATCAAGCAA ATTGGTGTTG GAAATTCGGT ATTTCCTATC CTCGGATCAA ACGGCTAGCT 
GCCACCAGTT CCAATTTTAG ACGCCGTGTG GCTGATTTTC TCAGTATCTC GACGAATGAC 
TTGGAATTAG ACGCTCCACC ACTTTTCATG CCTCATTCGA AAGTGACGCT TTTGCGTGTG 
ATCCAAGTTT GGGTATTCAA CGATTCAATT ATTGAATGTC GCCCCAGACC TTTCACGAAA 
GGAGTCTCAG GCGACAAGAT GAGAATAGAT CTGGGGAAGA ATAGCAAAAG AATTGATGAC 
GAGCATCTCC ATCAAATTCT TAGCAAGGGT CGCCATCCTT TCGCTCTTCA TGGATATCAA 
GAGATCGAAC AAAGGGGTTC TTTCGAAATA CAAGGTGCGA GCTCTGATAG TGGTATGGTG 
AGCGGAGATT TTGAGGAACG GTTTCTATCC TATGCCGTCG AGAAAGAAAT AAACGTCGCC 
TGGATTACTT CGCCTTCATC TTTTGTCCTA TATGTCCGTG CGGAGTCCTC TAAATCCAAG 
CGCTTTGCCG AAATCTTGAC AACCATGCGA CAAAGCCAAT TCAACGAATC TTCAAAATTT 
GCCTTTGAAA GCTCGAACAA GAAAGGAAGG GGAGAGAGAC CAGCAGGGAT GTGGAGCTTT 
GCCGATGTAA CCGATGGAAG GAAAGAAACA GGGACAATTT TTAAACGCTT TATGACAGAA 
TCTTTGAATC AGTCTCAGAG AAGATTTTTT ACAAAAGCCC TTTGCGATTA CCTGGAATCA 
CAACCTGCGC TCAGTGGTGT TTCCTGTGAT TTGCTGAAAA ATACAGCCAA ACCGATTCAA 
AAGTTCTCGA TTGTTTCTCG GGGGAGGAGC AACGCAATCT CGCCTGTTGA TCTGAACGAT 
TTGTTTGCAG CATCCGGGAT AATTACAAGC AAGGTAGTCA AGCAAGGTAA CCAAGCGATC 
ATTTTCTCCA ACTCTCCTAG CATGCCACTC GAATGCGGAA CAAAAGGAAA GCACTCGGCG 
AGCGTTGAAT CTAGCTGGGA CCGCCCCATC TTTCATCCCA TTCCAGAAGG TGCTAGAATT 
TTATCCATTC TGGCCTCTGG ACGGAGGAAG GAGCATGTAG TGCGCCTAAG CTCTTTGCCA 
TCTAAGGACA CACTGGCGAA TGGAACCTCC CCGGATAGCC TCGATATCTA CATGGAGCCT 
GGCACCACGA ATGTTTCTAA GCGCTGGAAA CGTTTTAACA CGGCCATCTC TGTTTACGTT 
CAGGAAAATT CCGTGCCTGC CTCAGCACTT CCAATGAATA CAGAGGCTAT TATGTATTGT 
TGCTGTGCTA ACACCCTTGA GGTCAGAGGG GGCGGTTTAC GTGTAGAAGG CCTTACTTTG 
TTGCCACCTG GACGCCCCTT TCTCCTGCTA TGTCGTTTGG CATTTGGGCT TTTCCATCAG 
AAGCATTCAG TAGAGGGAAC ACTGGAGGAT ACGTGCTTGC AGTGGGTATT GCAGGATCTT 
GGTAATGATT CGACTTTAGG CCTTTCGCAG GACGAGATGA AAATTCGGAT TAGAAAAGCT 
ATGTCATTTC ACCGCTCAGT TGGTGACCTA GGAGAACAAC TTGTGTGTTT TGACACGAAA 
GTCGCACCTC TTTTGGAAGT TTTTGATGGG GTCGATGGGT ATGAATCAAA GGTGTGGAAA 
GATCTGAAGA ATAATCCTAT GACAAGCGAC AACCTTAAGG CGTCTGCAAC AAAGTCGATC 
GATTGGAAGA GCCAGTCAGC TGAGCTCGTC GAAATGCGAA CGCTACCGAA GCAGCATGCC 
AGTGATCGGC TGGTTTCCAA AAAATGTGGT GAATTCGATT TAAAAAAACG AAGTCCCAAG 
AAGGACGAGT CTTCTGGTGG GGACACGGAT GATGATCTCC AAAGGATACT CGCAGCGACT 
CAACACTTAT CCGACGAAAA ATGTTTGAAC CATCAAGCAG AGAAAGTAAA GGCCAAAAAC 
CGGAAGAAGC GCGCATCTAA GGGCAATAGG GTGGTCCCTT CCATTGAACC TGTCATCTTC 
GAGCAGATCA CAAATCCGTT CGAACTTGTT CCGCAAAGCT TATTCCTGAC GGAGCTACCT 
GACGGAGTTG TTCCTATTGC CAACGAGCTT CACTCTACAA ACATCTTGGC GCTTGTTATC 
CAGCATTATA TGATGCATCT CAAAGACACA AGGGACCCTC CTTATTGTTT CGAAGGAGAT 
TGGTCACTTT ACCGTGGGGA GCTGGAGGGT AAACAGTACT TCTATGCAAG GTTTCTAAAT 
CGAAGTATAC TCTACAGGAA ACAGGCGAAC GGTATACAAG CCAAGCAATT TATAGTTCCT 
AAATGGATAC GAGAAAATGA ACCGCGCCCC TCATCGGTAA AGGACGCTAT CAATTGTCTC 
CCTCCAAGGT TCTCTGAGTT GCTAGGAATA TCTGTAGCTG CTATTGATGG TTGCAACATA 
CTGCTTTTCT CAGATGTGAC TTCCGCGATG CGAATGGAAT CGGCATTTTG GCTTGAACGA 
CATTTTCGTT CGTCTGCGAT TCATTGGTAC GAGCAGTCTC CTGTCACAAT GGTAGAACAC 
CTCATCCGAG GATATCAATG GTAGCGCTTA TTCGGAAAAC TCGTCAAGCG ACAGCCTAGC 
CGCTGAATCT TGTATTTGTT ATAGATAGGT GCAACAACAG CCAATTCTTT GTATTTCGAA 
AGTAAGTTTG ACTCTTCTAC GCATGCGGCG ACATTTCATT TGATGGAAAT ATGTTTCTGT 
CATCCTTCAT TGAAAAGACA AAGCCAATCT GCTTGTCGAA TCCCTCAAAT GACGAGCGGA 
AGGAGGGAAT TGTTTTATAA AGGGCTACGT GATTTTAGAT CACCTAATAC TTACAAGATT 
TTCGCTGTCA CCGTCAATTC TTAGGTTGTA CCGTCAAAGA TGCCTCACCA GGGGTAGCGT 
ATCAGGAGTC CGATTGACTT GGGTCACGCC ATGGCATAAG GAGCGACGGA GGCACGACCA 
TACGCACTCT AGAGTCATCA TCTGTCCTTA GAGCAAGAAA CGAAATCGGA GTCTCCTTCG 
AAGTGACGGA CGTTTCCGTC AAGTTGAATA TACGGATCGA AAGCATCGTC ATACATGCGT 
GAATTGAATG CCAAATTATA ACCAAAAGAC TACATCCCAC TATGTAACTC TTCGCAACTT 
CCAACGGATC CTCTTTTTAT TAGTCGTTGA AATCTGACTG GGAAGGCGAT GCAGAGATAT 
CCTACTAGGA TTGCCGTTGT CCTTGAATTG AGGTGTCAAT CCCTTCGTAC TCTTGCCATT 
CGTGCTTATA TCGACTAATG TACGCCAAAT ATTCTTCGTG CTCATCCAGC ATCATGTTTT 
CGGCAACTTC GTCTTCATGG TAAATTTTGC CTTCTTGAAA ATTTTGTATC CACGAAGCCC 
GAATTGACAC CAAAGCCATT GTCACAACTC CAACGCTGAG GAACAAGACG AAAGCCCAGC 
TGGAAGCAGC CATCCCCGTT GTACACATAG AGTCGTGTAT TGCTTCGTGA TAGATAGGCT 
GGACTCGGCT ACATCCGAGC GAACTTGACA TGCTATGGAA CGCTGTTCGA ATAAGTGTCA 
TGAGCCTTGC AGTGTCGCGA GTATCCACGA GAAGCTGTTC TATTTTTTCC CCACCGCACA 
TTTCAACGAG GTTGAAACGA CCCGCTGCAT CTACTGACGA AAGATGACGC CACGTGATGT 
CAACGGCTAC TTGAACGTTG GCTTCCAATC CCAAGAGTAT GCTAGAAGGA TCACTTGCAT 
CGCATCCTTG CGTAATTGCC GCAACAAACG CACCGACGAG ACCACCTTGT TCTACCCCTT 
TCGCCTGCAT AATGTGATGA ATGGTTTGTC CAGGATAGCC ACTAGCTTCA CCTTGAGTAC 
AAGCGTCATT TCCCATGGCT GCAACCAGTG CCGATATAAC GGCTACGATC CAGCAGCAGC 
AAGAAGAAAA AATAAACATG GGAAGTACGC CATACGACAG GAAAAGCTGA AAGCGAAAGT 
TCGATTCTTT TTTCCAAGAA AGAACGACAC CAAACAGTGC AAAGGCAATA AGAGTACTGA 
CTCCAAACAA AAGAGTAGGT ACAACCCAAA AAAATGCGCG AGCTCCATCT GATACCACCT 
CGAGAAAGTT GATTGATTCT TCGATACCAA AAAGTACTCT GTCAATATCA TATAGGGATC 
CTTTTATCGT CTCTTGGAGG ACCACATACT CCCCCCCAAA TAGATTAAGC ATGCCGCCAA 
TATCAACCCC CAGCTTAGTT CTCAATTCTT GTTCGGACGA AAGTGGGCAA AGAAGGTCGA 
CGCTTGCAGG TATCGTCTGG ATGAAAAAGA GAGTACCATT GATTGCTCTT TCGGCAGTAC 
TCGCCCATAC TGTTGCTTGA TCCAATACTT CTTGAGCATC TGATAGATAA GCACCCACAT 
CATTTGTTGT CTTGTTGAAA 

 

Protein sequence

MGVHGWNWFL KEEGWLPDTR QSCCSQSLWR NPSSLSESDA FASRIVPIPD RSVLHVDGNG 
LAFFLHRAAY ARHLAKVIKG GNNKQLRAHS KACTVPKQSL STEQVRRLLP NFMPLTLLSD 
AVREFASQLQ DKHGMKLLVY WDGEQRRVFK HETDKHRQTR RPEEWSNVQH YCQYGMMPAS 
KTICEWEYVF PKSRLFTTQI MNVLQTCGAE TIHCEEEADH IIAERASNNP NHYVLGNDSD 
FCFFPNVNYI PFATLDAQHN TTTACVIRRA EIAESIGLPE ELMVELAILM GNDYVDPRGA 
KLNFHSRNVY DLVEHLRDQV ESYRVTSQVA EIEEALRFIR ILYNFGDLSE FPFDERDSAG 
RVIDENDMAC DSILDNIALR PTIPDEVPLE LAKLRPFSDI SIKDAALPEH LDVFRDMALT 
KCASPGIQKG AWRPLWEDVP AAYLIEKIVA HSFEESGESP VVRVYDPFQI FDQHIFHDCL 
RQRRAHERTR KKDPVSKAVE PSIKPRTSTG EERLVLPVDE HEEIILASVR TNRVTIIQGE 
TGCGKSSRIP IMLLKAPCPI PTMNQSKMYI SQPRRIAAKA LVERVRSVEP ELKNAIALRM 
GHGVCEYESK KTRAWFVTTG YLVRVLANHP EKFDRISYLV IDEVHERSVD TDILCLLCRR 
LLKVNQNIRL VLMSATLAAS LYQEYFNTTE PPIKVGARRF PVKEVFLEDL QEQVAFSQKE 
EKTVNQLASE CNKMKCAKPP SLSYMEKIFS LVSHIAMFVG RPGSSVLIFV PGMNEIVAIT 
ELVEQLFKPG VRFTCFPIHS DIPFEDQMIV FDATAEDEVK IIIATNAAES SVTLPDVDHV 
ICLGLCKQIV YNEASHRQIL MPTWISKASA TQRAGRTGRL RPGTVYRMYT REVYRHYMDD 
FEPGEMVRIP LDSVILMLKE MLSDEDVTKV LLDCLEPPNI ATIDRSFQSL YKCRFITSAE 
GDCEITSLGS FVLAMGVDLL LGSLVGLGIQ FGVGAEAVQM AAVLSFPKTP WIMSNPLIHE 
SKDYNEMTTK TYVSRCHFDA NLFSEPLSAM NLIWEFEQAK NQANWCWKFG ISYPRIKRLA 
ATSSNFRRRV ADFLSISTND LELDAPPLFM PHSKVTLLRV IQVWVFNDSI IECRPRPFTK 
GVSGDKMRID LGKNSKRIDD EHLHQILSKG RHPFALHGYQ EIEQRGSFEI QGASSDSGMV 
SGDFEERFLS YAVEKEINVA WITSPSSFVL YVRAESSKSK RFAEILTTMR QSQFNESSKF 
AFESSNKKGR GERPAGMWSF ADVTDGRKET GTIFKRFMTE SLNQSQRRFF TKALCDYLES 
QPALSGVSCD LLKNTAKPIQ KFSIVSRGRS NAISPVDLND LFAASGIITS KVVKQGNQAI 
IFSNSPSMPL ECGTKGKHSA SVESSWDRPI FHPIPEGARI LSILASGRRK EHVVRLSSLP 
SKDTLANGTS PDSLDIYMEP GTTNVSKRWK RFNTAISVYV QENSVPASAL PMNTEAIMYC 
CCANTLEVRG GGLRVEGLTL LPPGRPFLLL CRLAFGLFHQ KHSVEGTLED TCLQWVLQDL 
GNDSTLGLSQ DEMKIRIRKA MSFHRSVGDL GEQLVCFDTK VAPLLEVFDG VDGYESKVWK 
DLKNNPMTSD NLKASATKSI DWKSQSAELV EMRTLPKQHA SDRLVSKKCG EFDLKKRSPK 
KDESSGGDTD DDLQRILAAT QHLSDEKCLN HQAEKVKAKN RKKRASKGNR VVPSIEPVIF 
EQITNPFELV PQSLFLTELP DGVVPIANEL HSTNILALVI QHYMMHLKDT RDPPYCFEGD 
WSLYRGELEG KQYFYARFLN RSILYRKQAN GIQAKQFIVP KWIRENEPRP SSVKDAINCL 
PPRFSELLGI SVAAIDGCNI LLFSDVTSAM RMESAFWLER HFRSSAIHWY EQSPIGATTA 
NSLYFESCTV KDASPGVAYQ ESD