Gene PHATR_43817 details

Gene Information

• Locus tag: PHATR_43817
• ID: 7204257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 117166
• End bp: 117823
• Gene Length: 658 bp
• Protein Length: 206 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002186282
• Protein GI: 219113397

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0473443
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAGCTCTAG CCAGAAAGAA TGATTCAACC AGTCGGAAGA AAGACCGTAT CTCTGTTGGT 
TCAGCATCGC ACCAGTGCTT CGAAACGAGC ACTTCTGCCA GCCGGCCGTT GTGTCGTAGT 
TCGAGGCTAC CAGGGTGAAG CTGGCGAAGG TCGTCCCACT CTTTCCGCAC AGGAAGAAGC 
ATTGCTCAAA ATTGCCCGGC CCAAGTCGGA AGAAATCTTT GCCAAGCACG TGGAGATGCC 
GAAATTGGAC CAGATTCCTC GCGCCAACTT GGGGCCGGAG CAAGCGATCG ACGCGGCCGA 
CGAAGCGAAA TTGAACCTCG ATATCCGCCG CAAACGACTG ATTTATCGTT CGAAACAGCG 
AGGATGGTTG GAAGTAGACT TGCTGCTTGG CACGTACGCC AGTGAACACG TTCACACCTT 
TGCGCACGAC GAATTGAATC AGTTCGAAGC CTTTGTAAAT CTCGAAACAA TCGACATTTA 
CAATATTATT ACTCTGCGAT TGGATATACC GGAGCACATG AAAACACCTA CCCAGGACAG 
CGTGATTGAA CGCATTCAGA AGTGGGCCCG CGGCAGTCCT TTGGGCAAGG CTGATCCGGA 
AAAGTACAGG GCCGTCAAAT CCAGTGCCAA ACTAATTTAA GTCTTCTTGC ATAGTGTA 

 

Protein sequence

MIQPVGRKTV SLLVQHRTSA SKRALLPAGR CVVVRGYQGE AGEGRPTLSA QEEALLKIAR 
PKSEEIFAKH VEMPKLDQIP RANLGPEQAI DAADEAKLNL DIRRKRLIYR SKQRGWLEVD 
LLLGTYASEH VHTFAHDELN QFEAFVNLET IDIYNIITLR LDIPEHMKTP TQDSVIERIQ 
KWARGSPLGK ADPEKYRAVK SSAKLI