Gene PHATR_43791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_43791 
Symbol 
ID7204155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp22576 
End bp23397 
Gene Length822 bp 
Protein Length273 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186263 
Protein GI219113359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.944774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCC GCGCATTAGT CGTTGGCGGG ACTAGCGGTA TTGGCCACGG CATCGCTTTG 
GCTCTAGCAA AGCGCGGCGA CGTGCAAGTA ACGATAGCGG GAAGATCGGT AGCGAGGGGT
CATGAAATCG TCGAGCAAAT GTCAGCTTTA TCACCTTCGC AAACACATCG ATTTGTTTCC
GTTGACGCCT TTGATCTCCA AAGTGTCCGG AAGCTGGCAA TCCAGAACGA CCCCAAAGAT
ATTGATATTC TCGTCATGAC TCAAGGAATG GCAACAATAC AAGGATACAC TCCTACAAGA
GACGGCCTCG ACCAGAAACT ACAACTTCAT TATTTTTCAC GATTCTTTCT TGCTAGCCTC
TTCGCAAAGA GTATGAAACC GAACTCACGA ATATTCACGG TTCTATCTGC GGGCGTTCAC
GGAAAGTTTC AACATCTGGA AGACGATTTT GAACTGAAAA ATACCTATTC GATCAAAAAT
GCAGCAGACG CGGCTGGTTT TTATCTGGAT GCTGGAATGG AAGCAATCGC GAATGACTGT
CCATCTCTTG CAGTAGCTCA TGCCGGCCCC GGATTTGTGA ATACGAATTG GGGCGCGGAA
ATGCCAGCGT GGATCCGAGC TCCGTTGCGC CCCCTCCAGC GAATATTCGG CAAGAGCGCC
GAAGACTGCG GAGAAACGAT GACAATGGCG CTGTTGAGGC TACCGACGGG TTATTCATTG
ATTGACGAAA ATGGCAAAAC CATTGAAAAT GGGATCAAAC ACACACGTGC TGAGCGAGAC
GCTATCGTTC AGAAGACTAT GCTGTTGTTA CCAGATGTGT GA
 
Protein sequence
MSFRALVVGG TSGIGHGIAL ALAKRGDVQV TIAGRSVARG HEIVEQMSAL SPSQTHRFVS 
VDAFDLQSVR KLAIQNDPKD IDILVMTQGM ATIQGYTPTR DGLDQKLQLH YFSRFFLASL
FAKSMKPNSR IFTVLSAGVH GKFQHLEDDF ELKNTYSIKN AADAAGFYLD AGMEAIANDC
PSLAVAHAGP GFVNTNWGAE MPAWIRAPLR PLQRIFGKSA EDCGETMTMA LLRLPTGYSL
IDENGKTIEN GIKHTRAERD AIVQKTMLLL PDV