Gene PHATR_4234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_4234 
Symbol 
ID7204152 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp17145 
End bp18148 
Gene Length1004 bp 
Protein Length286 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186260 
Protein GI219113353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0191281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCGTCTCCCT CGTTGGATCG AAGTGCGCTA ATCTACATGT TGCTCTTGGC GGTGCAGTTT 
GGGCTACAAC CCATTTTGAC GAGACGATTC ACACCGCCTG ACATTACACG ATCTACGGTA
GTTTTGATAC AGGAATTAGT TAAGGGCTTG CTTGCTTTAA GCATGATGCA AATTACGGGA
TCCACAAAGT CGGCCTTGAA CGGTAAGTCG CAATAGCTCA CAGTGCCAGT GGAGATGCAT
ATTCAGCCAG CTGGTCGCAT CATAGAATGT CTGACCTTCT TATCTAATTC AAAGGATGGT
CGGTGAGGAC ATGGATTTCG GTAGCCGCTG TTCCAGCGGT CTTGTATGCA ATACAAAACA
TGGCAGCTCT GGTCGCGTAC CAAAATTTGG ATGCTTTGAC ATTCAATGTA TTGAACCAAA
CGAAAACGCT CTCTGCGGCC TTGTGCTGTT ATTTTGTAAT GGGACGCAAG CAGTCTTTGA
CGCAAATACT GGCACTCCTG CTGCTACTAC TCTCTGCCTT GATTATGGAA GGCATCGTGT
CGGTGCATTG GGTTTGGGGA ATGCTTTCAC ACGTTGGCGG GCCGAGGAAA AGTGGGAATG
ACCCTGGGGA AGACAATTTT GCCTCGGCAA CCGCGTGGGA TGCGAAGCAC TACACCCACG
GTGTGGCGCC TATATTGCTC GCCTCCTTTA TTTCAGGGTT GGCGGGGGCG CTCTCACAAA
GCAACTTACA GTCGACTGCC GGAGGTGGCC GCAATCCGTA TTTGTTTAGT TTGGAACTGT
GTGTAGCGAG TATTTTGGTG CTCACCGCCA GCCTCGCTAT CTCTACCGAC GGACAGCATG
TGTTGCGAGA AGGGTTCTGG CAGGGTTGGA CTTTACCAAC ATTTATTCCA ATCGTTGTGA
ACAGTGTAGG TGGAATTCTG GTGGGTTTGG TCACGAAATA CGCAGGTTCG GTACGGAAAG
GCTTCGCTTT GATTTTTGGA ATACTAGTAT CAGGATTGAT TCAG
 
Protein sequence
SSPSLDRSAL IYMLLLAVQF GLQPILTRRF TPPDITRSTV VLIQELVKGL LALSMMQITG 
STKSALNGWS VRTWISVAAV PAVLYAIQNM AALVAYQNLD ALTFNVLNQT KTLSAALCCY
FVMGRKQSLT QILALLLLLL SALIMEGIVG NDPGEDNFAS ATAWDAKHYT HGVAPILLAS
FISGLAGALS QSNLQSTAGG GRNPYLFSLE LCVASILVLT ASLAISTDGQ HVLREGFWQG
WTLPTFIPIV VNSVGGILVG LVTKYAGSVR KGFALIFGIL VSGLIQ