Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_4234 |
Symbol | |
ID | 7204152 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 17145 |
End bp | 18148 |
Gene Length | 1004 bp |
Protein Length | 286 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186260 |
Protein GI | 219113353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0191281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCGTCTCCCT CGTTGGATCG AAGTGCGCTA ATCTACATGT TGCTCTTGGC GGTGCAGTTT GGGCTACAAC CCATTTTGAC GAGACGATTC ACACCGCCTG ACATTACACG ATCTACGGTA GTTTTGATAC AGGAATTAGT TAAGGGCTTG CTTGCTTTAA GCATGATGCA AATTACGGGA TCCACAAAGT CGGCCTTGAA CGGTAAGTCG CAATAGCTCA CAGTGCCAGT GGAGATGCAT ATTCAGCCAG CTGGTCGCAT CATAGAATGT CTGACCTTCT TATCTAATTC AAAGGATGGT CGGTGAGGAC ATGGATTTCG GTAGCCGCTG TTCCAGCGGT CTTGTATGCA ATACAAAACA TGGCAGCTCT GGTCGCGTAC CAAAATTTGG ATGCTTTGAC ATTCAATGTA TTGAACCAAA CGAAAACGCT CTCTGCGGCC TTGTGCTGTT ATTTTGTAAT GGGACGCAAG CAGTCTTTGA CGCAAATACT GGCACTCCTG CTGCTACTAC TCTCTGCCTT GATTATGGAA GGCATCGTGT CGGTGCATTG GGTTTGGGGA ATGCTTTCAC ACGTTGGCGG GCCGAGGAAA AGTGGGAATG ACCCTGGGGA AGACAATTTT GCCTCGGCAA CCGCGTGGGA TGCGAAGCAC TACACCCACG GTGTGGCGCC TATATTGCTC GCCTCCTTTA TTTCAGGGTT GGCGGGGGCG CTCTCACAAA GCAACTTACA GTCGACTGCC GGAGGTGGCC GCAATCCGTA TTTGTTTAGT TTGGAACTGT GTGTAGCGAG TATTTTGGTG CTCACCGCCA GCCTCGCTAT CTCTACCGAC GGACAGCATG TGTTGCGAGA AGGGTTCTGG CAGGGTTGGA CTTTACCAAC ATTTATTCCA ATCGTTGTGA ACAGTGTAGG TGGAATTCTG GTGGGTTTGG TCACGAAATA CGCAGGTTCG GTACGGAAAG GCTTCGCTTT GATTTTTGGA ATACTAGTAT CAGGATTGAT TCAG
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Protein sequence | SSPSLDRSAL IYMLLLAVQF GLQPILTRRF TPPDITRSTV VLIQELVKGL LALSMMQITG STKSALNGWS VRTWISVAAV PAVLYAIQNM AALVAYQNLD ALTFNVLNQT KTLSAALCCY FVMGRKQSLT QILALLLLLL SALIMEGIVG NDPGEDNFAS ATAWDAKHYT HGVAPILLAS FISGLAGALS QSNLQSTAGG GRNPYLFSLE LCVASILVLT ASLAISTDGQ HVLREGFWQG WTLPTFIPIV VNSVGGILVG LVTKYAGSVR KGFALIFGIL VSGLIQ
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