Gene PHATR_41778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_41778 
Symbol 
ID7203969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp208575 
End bp209429 
Gene Length855 bp 
Protein Length284 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186016 
Protein GI219112865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0751976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCG TTGGTATACT CGCCGATGAC GAAGATCCCA TGGTTTCCGT CATGAAGGTA 
GAAAAGGCTC CGTTGGAGAC TTATGCGGAC ATTGGCGGTC TAGAGTCGCA AATTCAAGAA
ATCAAAGAAG CCGTGGAACT GCCCCTGGCG CATCCCGAAT TGTACGAAGA CATTGGGATT
AAACCACCAA AGGGTGTCAT TTTGTACGGA GAACCCGGGA CGGGGAAGAC GCTGCTCGCC
AAGGCCGTGG CCAATCAAAC CTCCGCCACA TTTTTGCGCG TCGTCGGCTC GGAACTTATC
CAAAAATACC TCGGCGACGG ACCCAAGCTG GTCCGGGAAC TGTTCCGCGT TGCGGACGAC
TTGTCCCCGA CAATTGTCTT TATCGACGAA ATTGATGCCG TTGGTTCCAA GCGCTACGAC
TCCGGTTCCG GTGGAACGCG CGAAATCCAA CGTACCATGC TCGAGTTGCT GAACCAACTG
GATGGCTTTG ACGAACGAGG GGACGTTAAG GTGATTATGG CCACCAACCG TATCGAAAGT
CTAGACCCAG CATTGATTCG ACCCGGACGA ATCGACCGTA AAATTGAATT CCCGTTACCC
GACGTGGTCA CGAAACGACA CATTTTCAAT ATCCACACGA ACAAAATGAC ACTCTCCGCG
GACGTGGATC TGGAAAAATT CGTCATGTCG AAGGACGATT TGAGCGGCGC CGATATCAAA
GCGGTTTGTA CAGAAGCAGG TATGCTTGCC CTGCGGGAAC GAAGGATGAA GGTCTGTCAA
GACGACTTTG TCAAGGCGAA AGAGAAAGCG CTGTATCGGA AAAAGGGCAA CACTCCGGAA
GGATTATATC TTTAA
 
Protein sequence
MSVVGILADD EDPMVSVMKV EKAPLETYAD IGGLESQIQE IKEAVELPLA HPELYEDIGI 
KPPKGVILYG EPGTGKTLLA KAVANQTSAT FLRVVGSELI QKYLGDGPKL VRELFRVADD
LSPTIVFIDE IDAVGSKRYD SGSGGTREIQ RTMLELLNQL DGFDERGDVK VIMATNRIES
LDPALIRPGR IDRKIEFPLP DVVTKRHIFN IHTNKMTLSA DVDLEKFVMS KDDLSGADIK
AVCTEAGMLA LRERRMKVCQ DDFVKAKEKA LYRKKGNTPE GLYL