Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_41778 |
Symbol | |
ID | 7203969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | + |
Start bp | 208575 |
End bp | 209429 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186016 |
Protein GI | 219112865 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0751976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTCG TTGGTATACT CGCCGATGAC GAAGATCCCA TGGTTTCCGT CATGAAGGTA GAAAAGGCTC CGTTGGAGAC TTATGCGGAC ATTGGCGGTC TAGAGTCGCA AATTCAAGAA ATCAAAGAAG CCGTGGAACT GCCCCTGGCG CATCCCGAAT TGTACGAAGA CATTGGGATT AAACCACCAA AGGGTGTCAT TTTGTACGGA GAACCCGGGA CGGGGAAGAC GCTGCTCGCC AAGGCCGTGG CCAATCAAAC CTCCGCCACA TTTTTGCGCG TCGTCGGCTC GGAACTTATC CAAAAATACC TCGGCGACGG ACCCAAGCTG GTCCGGGAAC TGTTCCGCGT TGCGGACGAC TTGTCCCCGA CAATTGTCTT TATCGACGAA ATTGATGCCG TTGGTTCCAA GCGCTACGAC TCCGGTTCCG GTGGAACGCG CGAAATCCAA CGTACCATGC TCGAGTTGCT GAACCAACTG GATGGCTTTG ACGAACGAGG GGACGTTAAG GTGATTATGG CCACCAACCG TATCGAAAGT CTAGACCCAG CATTGATTCG ACCCGGACGA ATCGACCGTA AAATTGAATT CCCGTTACCC GACGTGGTCA CGAAACGACA CATTTTCAAT ATCCACACGA ACAAAATGAC ACTCTCCGCG GACGTGGATC TGGAAAAATT CGTCATGTCG AAGGACGATT TGAGCGGCGC CGATATCAAA GCGGTTTGTA CAGAAGCAGG TATGCTTGCC CTGCGGGAAC GAAGGATGAA GGTCTGTCAA GACGACTTTG TCAAGGCGAA AGAGAAAGCG CTGTATCGGA AAAAGGGCAA CACTCCGGAA GGATTATATC TTTAA
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Protein sequence | MSVVGILADD EDPMVSVMKV EKAPLETYAD IGGLESQIQE IKEAVELPLA HPELYEDIGI KPPKGVILYG EPGTGKTLLA KAVANQTSAT FLRVVGSELI QKYLGDGPKL VRELFRVADD LSPTIVFIDE IDAVGSKRYD SGSGGTREIQ RTMLELLNQL DGFDERGDVK VIMATNRIES LDPALIRPGR IDRKIEFPLP DVVTKRHIFN IHTNKMTLSA DVDLEKFVMS KDDLSGADIK AVCTEAGMLA LRERRMKVCQ DDFVKAKEKA LYRKKGNTPE GLYL
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