Gene PHATR_33610 details

Gene Information

• Locus tag: PHATR_33610
• ID: 7204061
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011671
• Strand: -
• Start bp: 1364662
• End bp: 1366851
• Gene Length: 2190 bp
• Protein Length: 729 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002186516
• Protein GI: 219113865

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTTG ATTCGCGTGA ACTACGATTC TTAAGCGGCT CGTTCGCCGA ATTTACTTCA 
CACTGTCGCT TTGCATCTTC TTCCTCAACG ATAGCCTCTG TGCTCGCCTC TGGTGCGGCC 
GCCGCAATCG AATACGAGAA TTCGTTTTAC CGTGTATCGG AAGACTCTCG CCGCGTGCCG 
CCAACGTCAC AACAAAGACA GGCGCAACCG CAAACACAAC GGCGCAATAC GCACACGAAG 
AGTAGTAGTA GTAGCGCACC AGGGATTTCT GCGTTGCCCA CACAACCCCG CCAGGGCTAC 
GGCCCATCAA TTCAGCTCAC GGAAGAGGAA CGGGCTTTGT TTACCCTCCT GCGCCAAGTC 
CGTTCCGAAA CCAAATTGGA TACCACATTA CGGGTTGCTG GGGGGTGGGT GCGGGACAAG 
CTGCTCGCAA CCCCAGAGTT TCAGACTTAT CACAAAGTAT TGGATGTTGG TAGTCAACGC 
CTTACTTCAA AGTTTCAAAA ACCGTCGGCA CCGTCCATGG GACGGCAAGG CACCAAAGTA 
TTGGTGAATA CCGACAAAGA TGCACAACCT GTTGATATCG ACATTGCGTT GGATGATATG 
TTGGGACGAG AGTTCGCCGA CCGTTTGAAT GAATACCTTT CGATGGAAGG CCAGGATACC 
ATCGCGGTCG GAGTCGTTTT AAAAAATCCC GAAAAGTCGA AGCATTTAGA AACTGCTACT 
ATGAAGGTTG GTTCCTTTTG GATAGATTTC GTTAATCTCC GCGCCGAGGA ATACACACAA 
GCTAGCCGTA TTCCTGATTT GATGCGAATT GGTACCGCCG CCGAAGACGC CTTTCGCCGT 
GATTTGACCA TAAATGCCTT GTTTTACAAC GTCAATAGTG GGCAGGTTGA AGACTGGACA 
GGTCGTGGTT TTGATGATTT ACGTAAAGGC GTAGTCGCGA CGCCCTTACC GCCACTTACC 
ACTCTGTTGG ACGATCCATT GCGAGCCTTG CGCTCGGTAC GCTTTGCGGC GCGTCTACGC 
TTTACCATGG ACGATGAACT AGTAGCAGCC GCCAAAGATA AATCTGTGCG AAACGCGTTG 
GCGCAAAAAG TGTCACGTGA ACGAGTTGGA GGAGAACTGG ATCTCATGCT GCGATCGCCC 
GATCCAGTTG GTGCCATGCG GCTTTTGATC AATCTGAGGC TGATTGATAC AGTTTTCCCG 
ATTGAGCACT ATTTGGCACC GGATAAAACG ACATCTACAG CTACTCTATT TGACAAAGGG 
CTTGAGCTGT TATCTACTTC ACATGATCAT TTGGCAGATT GCCGATGGTC ACCGCCTTTA 
TGGTGCAAGA ACTCCCGTGC AGCCTTTGGA GCCGTCGAAC ACCGTCTTTT ACAAGACGAA 
GAAGCTCGTC GCCTGTTATG GTACGCTGCT TTTCTAAAGC CAATTCACGA TCGTACGCCA 
GTGAGACAGG CATCCAACCC AAAACTGACA GGGAGGAAAG CGAATCGTTC CGCCGTTGCT 
AAGTTGCTGG TGGATAAACT CAAGCGACCT ACCCGAGACG CCGAGGCTGT CGAGCGTATC 
ATCAAGGCTT CCACAGATTT TACACAATTA GTAAACGCTG GCTGTGACAT TTCAGCTACC 
ATGATCCTCT TGAGCGACGT CCGGATTACG TACGTTGCTA GTTGTGACGA GTTTGACAAA 
TCAGAGGGCC TGACCGGAAG TTTAATTGGT ACAATGAATG GACGCCTCGT TGACAGTGCA 
GTTGAAGAAG ATCCAGTATG GCAACATGCG ATGGAGTTCC GAATGCTTTG TGCGAAACCT 
TTACAGCGGG TTGGCCCACT ATGGCGTGCC TCATTATTTT TGAGTATTTC TGAGGCCATG 
GCAACCTTGG AAGATGGATT TACAAGACTG GATTACACTA TTGAAGGAGA TGTGTTTGAT 
GAGATACTGG AGGAGCGACG ACAAGGAGTG ATCGAACGAT ATGACGCGTT TGCGACGGCT 
CTACAGCAAA CTGGATTGAT AGGCATTTGG GATCAGCCGC CTCTACTAGA CGGTGATACT 
TTGAAAACGA GCATTTTAAA AGGTATTCCG AAAGGACCAG CATTTCGAGA CGTTATGGAC 
GAGCAATCAA ACTGGATCAT TACACACCCA GGCGCGGACG TCGCAGCTCT GAAAACGCAT 
TTGCAAGAAA CCTTTCCGGA ATACATCTAA 

 

Protein sequence

MALDSRELRF LSGSFAEFTS HCRFASSSST IASVLASGAA AAIEYENSFY RVSEDSRRVP 
PTSQQRQAQP QTQRRNTHTK SSSSSAPGIS ALPTQPRQGY GPSIQLTEEE RALFTLLRQV 
RSETKLDTTL RVAGGWVRDK LLATPEFQTY HKVLDVGSQR LTSKFQKPSA PSMGRQGTKV 
LVNTDKDAQP VDIDIALDDM LGREFADRLN EYLSMEGQDT IAVGVVLKNP EKSKHLETAT 
MKVGSFWIDF VNLRAEEYTQ ASRIPDLMRI GTAAEDAFRR DLTINALFYN VNSGQVEDWT 
GRGFDDLRKG VVATPLPPLT TLLDDPLRAL RSVRFAARLR FTMDDELVAA AKDKSVRNAL 
AQKVSRERVG GELDLMLRSP DPVGAMRLLI NLRLIDTVFP IEHYLAPDKT TSTATLFDKG 
LELLSTSHDH LADCRWSPPL WCKNSRAAFG AVEHRLLQDE EARRLLWYAA FLKPIHDRTP 
VRQASNPKLT GRKANRSAVA KLLVDKLKRP TRDAEAVERI IKASTDFTQL VNAGCDISAT 
MILLSDVRIT YVASCDEFDK SEGLTGSLIG TMNGRLVDSA VEEDPVWQHA MEFRMLCAKP 
LQRVGPLWRA SLFLSISEAM ATLEDGFTRL DYTIEGDVFD EILEERRQGV IERYDAFATA 
LQQTGLIGIW DQPPLLDGDT LKTSILKGIP KGPAFRDVMD EQSNWIITHP GADVAALKTH 
LQETFPEYI