Gene PHATR_33568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_33568 
Symbol 
ID7203920 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp1264244 
End bp1265225 
Gene Length982 bp 
Protein Length266 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186497 
Protein GI219113827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.42747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGACT TGATACAACA ACGCGTCTCG TCCGACCTGG AAGACGTCGA CGTGGAAACG 
ACGCAATCTT GGGCTCCAAC AACATCCCCC GACGACTGCG CATTCGAGGA CGGGGCATTC
CAACGCGAAA AGATCCCGTC CCACGCTTGG ATTCCATGAC GTCGAATCGG ATCTGATCAA
TATCTAGGAG CAGGGCCCTT CTCAACAAAA GGGTTTCAAT CGGGAAATCG AAAGACTGCG
TCACTACTTT GCCGGGTTGC GCATGCGGGG CGACGATGTC TGAGTACGCC AGCCGTCCTT
CTTCGACTTT CTCGTCAGCA AATCTCGGAG CGATCCGATT ACCTCGTCCC ATCGGCCTCG
TGGATGTCGC AATACCTTGA CAAGCGTCAG GCTGGGACCG ACACTCCGAT GGCTGCCATC
CCCAACGCCG TCATTTAAAA GTACTAAGGT CCCTTCTTTC CCTTCATCAA AGAAGTTCTG
GATGGTGACC TGTTGTCCCT TCTTTTTACT CCTCAACAAG TACATTCAAG TCTACGGACC
TGTTTTTAAC CTCTCCTTCG GGCCCAAGTC GTTTCTGATT GTTTCCGATC CCGTCATGGC
ACGTCACGTC CTGCGTCAAA CAAGCCCCGA AAAAAACTGT AAAGGGATGC TGGCAGAAAT
TCTGGATCCC ATCATGGGCA AAGGCCTCAT TCCCGCCAAT CCAGCCACCT GGAAAGTCCG
TCACCAGGCG ATTGTCCCTT TGTTCCACAA GCAATGGTTG AATTGGATGA TTACCATCTT
TACTGAACGC GCCGAAATTC TTGCCAATGA TTTACAACCC AAATCAACCA AGGGGCAGGT
CATTGACATG GAAGAACGTT TTTGCAGCGT CAAACTCGAC AGTATTGGCA AAGCCGTCTT
CAACTACGAC TTTGGTTCCG TCACGGGCGA ATCGCCAATT ATCAAGGCCG TCCAAACAGA
ATCAAACTAC TCCTTCTTGT AA
 
Protein sequence
MYDLIQQRVS SDLEDVDVET TQSWAPTTSP DDCAFEDGAF QREKIPKSRS DPITSSHRPR 
GCRNTLTSVR LGPTLRWLPS PTPSFKSTKV PSFPSSKKFW MVTCCPFFLL LNKYIQVYGP
VFNLSFGPKS FLIVSDPVMA RHVLRQTSPE KNCKGMLAEI LDPIMGKGLI PANPATWKVR
HQAIVPLFHK QWLNWMITIF TERAEILAND LQPKSTKGQV IDMEERFCSV KLDSIGKAVF
NYDFGSVTGE SPIIKAVQTE SNYSFL