Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_33568 |
Symbol | |
ID | 7203920 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 1264244 |
End bp | 1265225 |
Gene Length | 982 bp |
Protein Length | 266 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186497 |
Protein GI | 219113827 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.42747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGACT TGATACAACA ACGCGTCTCG TCCGACCTGG AAGACGTCGA CGTGGAAACG ACGCAATCTT GGGCTCCAAC AACATCCCCC GACGACTGCG CATTCGAGGA CGGGGCATTC CAACGCGAAA AGATCCCGTC CCACGCTTGG ATTCCATGAC GTCGAATCGG ATCTGATCAA TATCTAGGAG CAGGGCCCTT CTCAACAAAA GGGTTTCAAT CGGGAAATCG AAAGACTGCG TCACTACTTT GCCGGGTTGC GCATGCGGGG CGACGATGTC TGAGTACGCC AGCCGTCCTT CTTCGACTTT CTCGTCAGCA AATCTCGGAG CGATCCGATT ACCTCGTCCC ATCGGCCTCG TGGATGTCGC AATACCTTGA CAAGCGTCAG GCTGGGACCG ACACTCCGAT GGCTGCCATC CCCAACGCCG TCATTTAAAA GTACTAAGGT CCCTTCTTTC CCTTCATCAA AGAAGTTCTG GATGGTGACC TGTTGTCCCT TCTTTTTACT CCTCAACAAG TACATTCAAG TCTACGGACC TGTTTTTAAC CTCTCCTTCG GGCCCAAGTC GTTTCTGATT GTTTCCGATC CCGTCATGGC ACGTCACGTC CTGCGTCAAA CAAGCCCCGA AAAAAACTGT AAAGGGATGC TGGCAGAAAT TCTGGATCCC ATCATGGGCA AAGGCCTCAT TCCCGCCAAT CCAGCCACCT GGAAAGTCCG TCACCAGGCG ATTGTCCCTT TGTTCCACAA GCAATGGTTG AATTGGATGA TTACCATCTT TACTGAACGC GCCGAAATTC TTGCCAATGA TTTACAACCC AAATCAACCA AGGGGCAGGT CATTGACATG GAAGAACGTT TTTGCAGCGT CAAACTCGAC AGTATTGGCA AAGCCGTCTT CAACTACGAC TTTGGTTCCG TCACGGGCGA ATCGCCAATT ATCAAGGCCG TCCAAACAGA ATCAAACTAC TCCTTCTTGT AA
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Protein sequence | MYDLIQQRVS SDLEDVDVET TQSWAPTTSP DDCAFEDGAF QREKIPKSRS DPITSSHRPR GCRNTLTSVR LGPTLRWLPS PTPSFKSTKV PSFPSSKKFW MVTCCPFFLL LNKYIQVYGP VFNLSFGPKS FLIVSDPVMA RHVLRQTSPE KNCKGMLAEI LDPIMGKGLI PANPATWKVR HQAIVPLFHK QWLNWMITIF TERAEILAND LQPKSTKGQV IDMEERFCSV KLDSIGKAVF NYDFGSVTGE SPIIKAVQTE SNYSFL
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