| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_33295 |
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| Symbol | |
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| ID | 7204380 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 542624 |
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| End bp | 546324 |
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| Gene Length | 3701 bp |
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| Protein Length | 1186 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186367 |
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| Protein GI | 219113567 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCACA ATCCGAGGTC GCGCAAAGGT GATATGGTTT TCCCTCGACC GTGAATGCAG
CGCCCTCCGA CAATGAGGAT CAGAAGAGAT CCTCGTGCAA GCATCTGCAA CAAACTTGCG
GCGAAACCTG TTCTCTCTAC ACCTACCTCG CAGCTGTATT CATCGTGAAC GTGCTGTTGT
GAATTATCTG GCAGGCCGAG ACTCTCGTAT CATCAGCATG GTGGTTGCGG AAGTTCCCCT
GTGGGTTATG CACAGCAGCA ACGCGAGTTC CAATACTACT CTGGACGGTG CCAGCGGACT
CGCAACTGGT GGTCCTTTCA ACAAGCTTTC GGATGGACAT TTTTCCCGTC ACCATCATTT
CGAGCACAAG GCGGCTTCTT CCTTGGCCTT GTTGGACTCG GCGTCGGGAA GGGCAAGAAA
GTCTGCCATT TACGCCGTAG ACGTCCATCC CGACGGCCGA ATCTTTGCGA CAGCGGGAGG
CGACTGTGCG GTCCGAATTT GGAATACACA GGCCTTGTTT GCTCCCAAAA ACAAGGGCGG
TAGCTTTGCT GTGGCAGGTT CTTCGGATCC GACCGGCAAA CCCAACAATG CTACCACAAC
CTACGTGAGC ACGAGTGCCT CGTCGGGACC GGAAGCCTCG GAAAGTAGCG CTGGGGAACA
AGAAAGTGAC GTTGGTCCCC GGGACGAAAT GGTTCACGAT CTTAATAGTT TCGTCCGTCG
CAAAAAAGAC CCCACAGTGA ACCAATCCTC GGCGGTACCC GCCGAGACGA CGAAATCATC
TACTGCATCC GGGCAGTCGG TAGCGGACTC GTCTCCTGTT CGCCCCTCGA CGCACAAAAG
ATCGCACCAT CAGCATCGTT TACTATGTAC ATTGTCCGCA CATTCCGGTT CATCGGTACT
GGCGGTGCGA TTTTCAAGTA CCGGAACCTA TTTGGCTTCG GCGGGGGATG ACGGTTGTGT
GTGTATCTAC ACTCACAACG AGGACACGGA GGGTAACCTG ACCCAAGAAC CGTCACCGCA
CGACGAGCAC TGGTCTCGGA TCAAACTTTG CAGGGGACAT GGCTTGGATG TTGTGGATTT
GGCTTGGGCA CCGGACGATT CATACCTAGT TTCCTGTTCG CTGGATTCCG AAACACCGAT
CATTGTGTGG AAAACGACTC ACTTGGGATC TTCTCGTCGA GCCAACGCAA CGAGTATGAT
ACTGAATCCA TTCAAGGTTC TCGGTAGAAA AGAACACACG AGTACGGTCA AGGGAGTTTC
TTTCGATCCG GCAGGATCCT ATTTTGCGTC CTCGGGTGAT GATCCAGCCG TCTGCGTCTG
GCGCGCGCAC GATGATTGGG GTTTGGAAAC CAAGATTGAC GCTAGCAGCG GTATCTTTCG
GCGCTGGAAA GAAGACGATA CTATGGCCCT GTCTTCGCAA AGTCTTTTCC GCCGAATTAG
TTGGTCAACT GATGGAGCAT TCTTGTGTTC CACTAATTCG GTAGTGAAGA ACAAGCACGT
GGCGTCCACT ATTAGTCGCG ATGGGTGGAG TGTGAGTAGT GCGTCTTCGG CGGCAGCGGG
AGCGGCCAAC CTAGTGGGGC ATAAGCAACC AGTGGTCGTC AGCCGCCACG CGTCGCAGCT
GCTGAGTGCA CGCAAAGCCA ATGTTTCAGG AGGCCAAAAC GGTGACGACG ACGAAGAACC
CGATTACGCA ACTCTGTTGG CACTCGGCGA CAAGCGAGGC TTCGTAACGA TCTGGAGTAC
CAAGAAATCA CGTCCGATTT TTAAACTTCA ATGCAGTGAA AGTCGCAGTA CGGTCACTGA
CATGGCCTGG GGTTCCTTAC CAAGAGGGGA TCTGATGCTT TTAGTAACAT TTTTGGACGG
TCAGGTTGTG GCCCTGCGCT TTGAAGTACC CAGTGAGTTG GGAAATTTGT TGAGTAAATC
TGAACGGGCA CGCGTATTTC AGCTCAGGTA CGGTATCGAT GTGAACGATG TGGAAACTTT
TGGACAGCGC CATCTATTTA CAGGAGCAAG CTCAGGTCCT AACCTGATCG AAAACGCTTT
GCAAATGACG TTGGAGCACA CTCATACTGG AATAGACGAT ATGGACGATG ATACCTCGAC
ACCAGGTCCG GAACCAGAAG AGAGATTGAA TGACCTGCAA GCGGTTTCAA TTCGTTCGAA
ACAGAAGGAA AGCCTCTCGA AAGGAAAGAA GCGCATTCAA CCAGTTCTTA TGGCTGTTAC
CAGCAAGAAA ACGAAGCCAG GAGCCGAACT TCTCAAGACC AAAGCCGTCG AGCCAAACCA
ATCCATCGAT CCTTTGCAGA ATGCTATTGA TGCAGCCAGC AAGGCCTCAG CCGCCATGGC
AACCGCCGAT TCCACCAAGC GCGACATTAC TGTAAACGCT GCTCCCATGG ATGGCCTGTC
CGGAACAGCG CAGTCAAATT CCGCTCGGCC ATCAGTGCGA CCCAATGGAC CTAGCTCTTG
GATGGGAACA ATTCTGCCGC ACAGCTCCGA ACGGATCCAT TCTCTGGATC TCCCGCTTCT
TGGTTTACAG TCAATGGATG TCACCACAGG ATTCGCAGAG CCATGCGTCG CCGAATGCAC
CAACTCGGTC AAATTACCGG TGGGGTCACG GACAACATCA ATTCCATGTG TCGATGTAGC
ATTATCTCGT GATGGCAAAA TATCGTGGAA GGATCAAATC CCTGGTACAT CATGCTCGGC
CATTGCGGCC AGTACCACGT TAATGGCTGT CGGAACAACG GATGGATGCC TACAATTGTA
TGGCACATCT CCTACGATCG GTTGGACATG TGGTCAGAGC TTTCGTTCTC ATCCGTCGTT
AGTTCTTGGG CATCCCATTG TCTCATTGCA ACTTCAAGAG ACGCAGGGGG AAGACGACGA
AATCTTTGCT ACTTTGCTCA CCTTAACGGG AGATGGTACA TTTGCCGTCT ACTCTGTTCT
TCCAGTATTG CAACTACAAT TCAAAGGATC TGTTATGCCG GCGATGTCAC ACATGGCTTT
GGGTACATCG TTGACGTCGG AGCAACATTC GATAAAAATT TCCAGAATAC AAATTACTGA
AACCAATCGT GTATTACTGC TTCTATCGCT ACAGACAGTT GACAACGCAC AGCTTCGAGG
CGGATTGCGG GGGACTACTC AAATTGACGC AGGGGTTGGT GGCTCGTTGC AAGCGTTTGT
CTTCGACCAA AAGGCCGAAC TTTGGATGAA GGCGGCGGAC AACCGCTTTG TCCTTTCCGA
CTTTTACAGT GCTCTACCGT CTGCGAAATT TAGCCCCAAT GGAGAGCTGT CAAGGTTGGA
AGATGCTGTT CGAATCGGCG CACTCCAAGC GAGCATGAAG CCAGCTCAGC GCGGTCGTCT
ACGTGATACC GACCGCCATG CGGACGAGAT GTTTTCCAGA GCCGATTTGG AATCTGGGAA
TTTTATTCCG ACTCGGGCAC ATTGCGAGGA TCGAATGGCT TGCGCTATTG CACTCGAATC
TGCGGACGAA TTCAAAAAAT GGTTATCATT GTATATAAAA GTATTGTGTG TGGTGGGGCA
CACTGATTTT CTCAGAGTTT TGGTGGATAT CTTAATGAAC GAACCCAAGG ACAAACGAGA
AACGATTCCT GATGGCATGT GCTGGTGGAT GTCGATCGCC CCTACAGTGG TGGGTTTGGA
CAAAAGGACA CTTGTCAGGT CGCTAGTTAT TCCCGAGATG A
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| Protein sequence | MNHNPRSRKG DMVFPRPCIH RERAVVNYLA GRDSRIISMV VAEVPLWVMH SSNASSNTTL
DGASGLATGG PFNKLSDGHF SRHHHFEHKA ASSLALLDSA SGRARKSAIY AVDVHPDGRI
FATAGGDCAV RIWNTQALFA PKNKGGSFAV AGSSDPTGKP NNATTTYVST SASSGPEASE
SSAGEQESDV GPRDEMVHDL NSFVRRKKDP TVNQSSAVPA ETTKSSTASG QSVADSSPVR
PSTHKRSHHQ HRLLCTLSAH SGSSVLAVRF SSTGTYLASA GDDGCVCIYT HNEDTEGNLT
QEPSPHDEHW SRIKLCRGHG LDVVDLAWAP DDSYLVSCSL DSETPIIVWK TTHLGSSRRA
NATSMILNPF KVLGRKEHTS TVKGVSFDPA GSYFASSGDD PAVCVWRAHD DWGLETKIDA
SSGIFRRWKE DDTMALSSQS LFRRISWSTD GAFLCSTNSV VKNKHVASTI SRDGWSVSSA
SSAAAGAANL VGHKQPVVVS RHASQLLSAR KANVSGGQNG DDDEEPDYAT LLALGDKRGF
VTIWSTKKSR PIFKLQCSES RSTVTDMAWG SLPRGDLMLL VTFLDGQVVA LRFEVPSELG
NLLSKSERAR VFQLRYGIDV NDVETFGQRH LFTGASSGPN LIENALQMTL EHTHTGIDDM
DDDTSTPGPE PEERLNDLQA VSIRSKQKES LSKGKKRIQP VLMAVTSKKT KPGAELLKTK
AVEPNQSIDP LQNAIDAASK ASAAMATADS TKRDITVNAA PMDGLSGTAQ SNSARPSVRP
NGPSSWMGTI LPHSSERIHS LDLPLLGLQS MDVTTGFAEP CVAECTNSVK LPVGSRTTSI
PCVDVALSRD GKISWKDQIP GTSCSAIAAS TTLMAVGTTD GCLQLYGTSP TIGWTCGQSF
RSHPSLVLGH PIVSLQLQET QGEDDEIFAT LLTLTGDGTF AVYSVLPVLQ LQFKGSVMPA
MSHMALGTSL TSEQHSIKIS RIQITETNRV LLLLSLQTVD NAQLRGGLRG TTQIDAGVGG
SLQAFVFDQK AELWMKAADN RFVLSDFYSA LPSAKFSPNG ELSRLEDAVR IGALQASMKP
AQRGRLRDTD RHADEMFSRA DLESGNFIPT RAHCEDRMAC AIALESADEF KKWLSLYIKV
LCVVGHTDFL RVLVDILMNE PKDKRETIPD GMCWWMSIAP TVLFPR
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