Gene PHATR_33198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_33198 
Symbol 
ID7204290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp290123 
End bp290770 
Gene Length648 bp 
Protein Length215 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186315 
Protein GI219113463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACTGA TTCACACTCC GCGAACCATC GTTAGTATCG CCAAAGGACT TTGGAAGCGT 
CGGCAGGGTA CCGTTGACTG GCCAGGTCTG GGACCGGATA AGCCATACGT CTACAACGCT
CGCCTTGGTT TATTTGACGT GGATTACCTC GGACACTTGA ACAACGCTGC ATATTTATCC
CATGCAGAGT TAGCCCGTTG GGAACTTACA GCCGCCAACG GAATGCTGAC CAGTATGCTA
CAAAGCGGAA CAAACTTTAT TGTTTCCGGT TCGTGTATAC GCTATCGACA GGAGATTCGC
CCTGTTTTTC GAAAGTTCCA GGTTGACACG TACGTTGCCG GCCTAGACCA ACGCACAATA
TGGATGGTTC AAAACTTTAG GTATCCGGGG CAAAACGAAC GTATTCGTGC ACAGATGATT
GTTCAAGGAG TGGCAGTTCA AAAGACGAAA GGAATTATCG ATCCTCGTTC TTTCTTTGTA
GATACCGTTG GCATGCCGTC AGATTTAATA GAGAGCGTGA ACCTTCCAAT CACCTCCGAC
GATACTGTCG AAGACGTTCT AGAACGCTAC TCGTTTCTGG AAAAAGCACT ACGAAGAGCA
GCAACAGTTG ACGACGAATT ACAAAAAAAG GAGGCAAATA AGGAGTGA
 
Protein sequence
MGLIHTPRTI VSIAKGLWKR RQGTVDWPGL GPDKPYVYNA RLGLFDVDYL GHLNNAAYLS 
HAELARWELT AANGMLTSML QSGTNFIVSG SCIRYRQEIR PVFRKFQVDT YVAGLDQRTI
WMVQNFRYPG QNERIRAQMI VQGVAVQKTK GIIDPRSFFV DTVGMPSDLI ESVNLPITSD
DTVEDVLERY SFLEKALRRA ATVDDELQKK EANKE