| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_18826 |
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| Symbol | |
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| ID | 7204139 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011671 |
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| Strand | - |
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| Start bp | 1401276 |
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| End bp | 1404967 |
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| Gene Length | 3692 bp |
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| Protein Length | 1135 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002186524 |
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| Protein GI | 219114688 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0391599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACACT GTGCCGTTTT TGTCCGCACT TCTGTCAGTA CTATGTTGTA TCGCAAAGCG
CTACGAGTAT CCGCTTCCGG TCGGGCCAAA ACCTCCACCG GACAAGTAGT CAACATGATG
AGCAACGACA CGGCACAGTT GCAGCGATTC TTGCAGTTCG TCGGTATGAC TTTGGTCGCC
CCCTTGCAGA TCATTATCGC CTTGGTTCTG ATTTTTCAAC AAGTACGTTT CGCTCTGTGT
TACAGTTAAT TGTCCTCGAA AATCTTGTCC ATGGATGTTC TTTCTCACTT TGAAATTCTG
TTCTTTTCAT TGTCTTTCTC GGACAGGTCG GAAACGCCAC TTGGGTTGGT GTTGGATTCA
TGTTTGCCTT GGCACCCATT AATACCGTTG TCTTCTCCAT AGTATCCAAG CAACGTCGCA
AGGTACTCAA ATATTCCGAT TTGCGCGTCA AGATGATGAA CGAAATTCTT GCCGGTATTC
GAATTATCAA ATTCTACGCC TGGGAGCGGC CGTTCGGAAA AGAGGTCGGG CGTATTCGTG
GCTCCGAACT AAAGGCCTTG ACTAAACTTG CTTATACCTC GGCCATCGGA TTTTCGCTCA
TCCTCATGTC AGCGCCTCTG ATACAACCCA TTCTAGTGTT CTTAACCTAC GTGTCTATCC
AAAACGAACC GCTCGACGCG GCTACAGCCT TTACTACAGT CGCACTTTTC AACATTATGC
GCTTTCCGTT CGCTTTTATG CCCATGGGAC TCTTGCAATA TATTCAGAGC AAGATTTCTT
TAAAACGTCT GGAGCGTTAC CTGGCCTTGC CGGAATTGGA CGAATACGTC GAGCATACGC
CGCCTCCGTC TGCGAGTATG GACGCAGCCG AGGCGCAATA CGGTAGCGTC ACAATACTGA
ATGGTAGCTT TGCGTGGATG GATCCGGAAG GTAAAGAAAT CCGCCCGATT CAAGACGAAG
AGCCGAAAAA GGAACGCCGG AAGTCGAAGC GTACCAAAGG CGACGAGACC TCGGATGTTG
ACATGATGGC GAGTAACCAC AGTTCAGTCG CGGGTAGCAG CGTCTTGACT GAGAGTACCC
AGAAAACTCC TCCCATCACG CTGCAAGAAT TGACATGCAC AATTCAAACC GGTAAGCTAG
TCGCAATTGT CGGTGCCGTT GGTTCGGGCA AATCTAGCTT TCTGTCCGCT ATCTTAGGTG
AAATGGAACC CGTCAAGGGA TGCAAAGTTT ACATGCCGCG TCCTGTAGAT GCGCCAACAG
GCTTTGTGTC TTACTGTACG CAGACCCCGT GGGTCGTCAA CGACACTTTG AGAGGAAATG
TTCTGTTTGG ACGTGATTTC AATCAAGAAC GATATGAACG CGTTCTGGAG GCGTGTGCGT
TAGTGGACGA TCTCGCTATT TTACCTGCCG GTGATTTGAC GGAAATTGGC GAACGAGGCA
TCAATTTGTC GGGTGGTCAA AAGGCCCGTG TTGCGTTAGC CCGGGCTTTG TACTCCGACG
AGACTCGTCT GATGCTCATG GACGATCCCT TGTCGGCGGT GGATGCACAT GTTGGAGAGC
ACATATTTTC TAACGCTATA GCCGGAGACA TGGCCAAAGG AATAACTCGA TTGTTAGTCA
CACATCACGT TCACTTGCTG TCACGATGTG ATGACGTCAT TGTTATGGAG CACGGCCGTA
TCAAGCACCA GGGCCGGTAC AGAGATTTGG TGGCCGCCGG TGTTGACTTT GCGGGCGCGG
TGGACGTCTC AAAAATCAAG GCAGCCTCAA AGCAGGAGCC TGAAAAATTT GACGACGAAG
TTACAGCCCA AAAGGAGGTC GAGCTGTCGG CTGAGAAGAA AGCAGCTCTA AAGAAGAGCG
GGAAAAAGCT TGTGAGGGAC GAAGAGCGCG AAGAAGGAAG TGTTGACGGC TCGGCTTATA
TGCATTACGC TAGAGCCGGT GGATTGTTGA CGGCGGCATC CGTTTTTGTC ATTCAGGCGC
TCGGTCGAGC CTCAGAAGTG ACTGCTGGGT TCTGGCTGGC CTTGTGGGCA GAGCGCAGTC
TTGAAGCATC GTTGAGTGGA GATCCGTTCT CGCAGACTAC AACAAATCGA TATCTTGGTG
TGTACGCTTT GTTTGGTCTG GGCGGTGTCA TAGGGCTTAC CGCGCGCGCC ATCATTGTTG
CGGTTCACCG CCTTCGGGCT TCAAAGAAGA TGCATGATGA CTTGACCGAG AGTATCTTAC
GTGCACCTGT TTCTTTCTTT GACATCACCC CTACTGGACG GATTCTCAAT CGTTTTGCGG
CCGACATGGA CAAGGTCGAT CTCGAGCTGA CGCAGAGCCT TTCACAGGGA GTGTCAACTG
TCTTCAGTGT TCTCGGAGCA ATTGGGGCAA TTATCGCTGC CACAAACGGC ACATTTCTAG
TTCCATTGAT TCCTATCGGC TATTTGTACT ACCTGATCCA GAAGTGGTTT CGAAAGACAT
CAACTGAGCT GCAGCGCATC AACAGCATCG CAAATTCTCC TATATTTGCT GATTTTTCTC
AAACCCTCTC CGGTACTTCG ACGATTCGAG CCTACGGCGA AGAAAAGCGG TTTTTCATCC
AGTGCAAGAA GTCTTTCGAC AACATGAACA CATCATACAT CCTCGTTCAG TTAGTCAATT
ACTGGCTTGG ACTTCGTCTT GATGTCTTGG GAGGACTTAT GGGGGCCTTT ATTGGAGGAG
TCGCTGTTGC TACTTCGTCG TCTGGTTTCA TTTCAGCAGG GTGGCTTGGT CTCGCCCTGT
CGTACAGCAT TGAAATGACA AATTACCTCA AGCATGGAGT TCGTATGATT GCTACAATCG
AGGCGCAAAT GAATTCTGTC GAACGTATTC TCTTCTACAC CAACAACATA AAAGCGGAGG
CACCTGAGTT TATCCCGGAA TGTGATCCTG AACCTGGTGT ATGGCCGATC AATGGCGAGA
TCGAGCTCAG CCACGCCTCC ATGCGGTATC GCGATGGACC ACTAGTTTTG AAGGACTTAT
CGCTAAAGGT CAAAGCCGGC GAGCGTGTGG GAGTTTGTGG GCGTACAGGA AGCGGTAAAA
GTAGTCTTAT GATATGTTTG TTCCGTATCG CAGAACTGGA AGATGATGGC GGAAAAATCT
TGATTGATGG GATTGACGCT TCCGAAATTG GAACTTCAGC TTTGCGTTTA AATCTTTCCA
TCATTCCTCA GGACCCTGTG ATATTTTCCA ACACCGTTCG TTATAATCTG GATCCGTTCT
CAGCAGCAAC AGACGAAGAA GTGTGGGAAT CTTTGACGAA GGTGCAAATG GCTGACACTA
TCGCGGAGTT ACCAAATGGA CTCAGCGAGC AAGTTTCGGA GGGAGGAGAA AATTTTTCGC
AGGGACAGCG CCAGCTTTTA TGTATTGCGC GATCGTTGAT TCGTAAGCCC AAGATTTTAG
TAATGGACGA AGCGACGGCG AGTATCGACA ACGCTACGGA CTCGGCAATT CAGCGAATGA
TTCGTGAAAA TTTTGAGAAT ACAACAGTGT TAACGATCGC TCATCGCTTG AATACGATTA
TGGACAGCGA CCGCGTGTTG GTGTTAGATG ACGGAAGGAT AGCCGAGTTT GATACCCCAG
AGGCTTTGTT GGCGAAAGAG ACTAGCTTGT TCCGTGCAAT GGTAGATAAA AGTCGGGCTG
CCAAGTCAAA AACTCTCATC GAAGGAGAGT AG
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| Protein sequence | MAHCAVFVRT SVSTMLYRKA LRVSASGRAK TSTGQVVNMM SNDTAQLQRF LQFVGMTLVA
PLQIIIALVL IFQQVGNATW VGVGFMFALA PINTVVFSIV SKQRRKVLKY SDLRVKMMNE
ILAGIRIIKF YAWERPFGKE VGRIRGSELK ALTKLAYTSA IGFSLILMSA PLIQPILVFL
TYVSIQNEPL DAATAFTTVA LFNIMRFPFA FMPMGLLQYI QSKISLKRLE RYLALPELDE
YTSDVDMMAS NHSSVAGSSV LTESTQKTPP ITLQELTCTI QTGKLVAIVG AVGSGKSSFL
SAILGEMEPV KGCKVYMPRP VDAPTGFVSY CTQTPWVVND TLRGNVLFGR DFNQERYERV
LEACALVDDL AILPAGDLTE IGERGINLSG GQKARVALAR ALYSDETRLM LMDDPLSAVD
AHVGEHIFSN AIAGDMAKGI TRLLVTHHVH LLSRCDDVIV MEHGRIKHQG RYRDLVAAGV
DFAGAVDVSK IKAASKQEPE KFDDEVTAQK EVELSAEKKA ALKKSGKKLV RDEEREEGSV
DGSAYMHYAR AGGLLTAASV FVIQALGRAS EVTAGFWLAL WAERSLEASL SGDPFSQTTT
NRYLGVYALF GLGGVIGLTA RAIIVAVHRL RASKKMHDDL TESILRAPVS FFDITPTGRI
LNRFAADMDK VDLELTQSLS QGVSTVFSVL GAIGAIIAAT NGTFLVPLIP IGYLYYLIQK
WFRKTSTELQ RINSIANSPI FADFSQTLSG TSTIRAYGEE KRFFIQCKKS FDNMNTSYIL
VQLVNYWLGL RLDVLGGLMG AFIGGVAVAT SSSGFISAGW LGLALSYSIE MTNYLKHGVR
MIATIEAQMN SVERILFYTN NIKAEAPEFI PECDPEPGVW PINGEIELSH ASMRYRDGPL
VLKDLSLKVK AGERVGVCGR TGSGKSSLMI CLFRIAELED DGGKILIDGI DASEIGTSAL
RLNLSIIPQD PVIFSNTVRY NLDPFSAATD EEVWESLTKV QMADTIAELP NGLSEQVSEG
GENFSQGQRQ LLCIARSLIR KPKILVMDEA TASIDNATDS AIQRMIRENF ENTTVLTIAH
RLNTIMDSDR VLVLDDGRIA EFDTPEALLA KETSLFRAMV DKSRAAKSKT LIEGE
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