Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_9956 |
Symbol | |
ID | 7197082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 107142 |
End bp | 107741 |
Gene Length | 600 bp |
Protein Length | 200 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177560 |
Protein GI | 219111617 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.841338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGTACGAAAA CGGTCCACTT TGTACGTCAC GGTCAAGGAT TTCACAATCT CATGGCCGAT CTGGCCCACG CACAAGGCAA GGAGTGGGAA CAATTCAAAG ACACACCGGA GAATCCTTAT CTAATACCCG AGATTCTCGA CGCACCTTTG ACTGAGAAAG GCCGGCAACA AGCGTACGTG CTACAAGCAC AAATAAACGG CATGGAGCTT GGACAAAAAC CTCAATTGGT GGTGTTTTCC CCCAATTGTC GTGCTCTGCA GACGGGCGTC ATTGTGTTTG AAAGCTTGGT CGGGAAGGTC CCGTTCGTCG CGCATGAAAT GGCTCGCGAA GAAAGCGGTA TACACGTTTG CGACAAACGT CGTCCCGTGT CACGCCAACG AACCGAATTT CCTCAGGTCA ATTTTGGTCT ACTCGAGGCA GACGATGATC CGCTGTTCCA GGACGACGTT CGCGAAACCA GACAACAAGT CGCGGATCGC GTTTACCAGT TCTTTGAATG GCTAGCGACG CAAGATGAGC AGATTGTGGC CGTCAGTAGT CACTCTGGCT GGTTACTAAC GGTGTTCAAT GCAATGCTGC GGTGTGACGA ATCGCTTCGG
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Protein sequence | RTKTVHFVRH GQGFHNLMAD LAHAQGKEWE QFKDTPENPY LIPEILDAPL TEKGRQQAYV LQAQINGMEL GQKPQLVVFS PNCRALQTGV IVFESLVGKV PFVAHEMARE ESGIHVCDKR RPVSRQRTEF PQVNFGLLEA DDDPLFQDDV RETRQQVADR VYQFFEWLAT QDEQIVAVSS HSGWLLTVFN AMLRCDESLR
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