| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_56602 |
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| Symbol | |
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| ID | 7197549 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 645258 |
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| End bp | 649947 |
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| Gene Length | 4690 bp |
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| Protein Length | 1479 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177975 |
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| Protein GI | 219112447 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.678567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TGCGGGCAAA CGATGCCACC ATGCAGATCG ACCGTATTAT AATCGCCTTC GGGATCGTTG
GAGTGACTTT GTGTGGCAAT GTTGTTGACG GGTTGGTTCC CGTGCAAACG AGGAGCACCA
GGACTCTCTT GGGGTCCGTG AGAAGCGCAC GGAATCCAGC AGGATCCAGA CCTTGTCACG
CGGCACCAAC GTTCACTAGA CTCGCCGCCG TTGCCGTACA TGACGAGGAC CATGCCGTGT
CACCACAGCC AAAGAAGCAC AATACTGCCC GTAAGCCGAA AATTGTGTTG GTGGCCGGAT
TCGAATCGTT CAATCGCGAA TTGTATTCTC AAGCCGCCCG CGACCTCGAC GTCGACTTGA
CGGTCTTCGC CGACTCGGAC ATTCGGGTCC CCCCAACCAC GACAACGACG ACGGTACGCG
ATGCCCACGA CTTGGCCGTC AATCCAGACT TTGCCTCCGC GGTCCGTCAG GCCGACGCCT
TTATAGGTTC GCTCATTTTC GATTACGACG ACGTGCTGGC GGTGCAATCG GTCCTCCCCG
CGGTCCAAGG ACCCCGCCTC GTTTTTGAAA GTGCCACGGA ACTCATGACG TTCAATACCG
TCGGAAGCTT TTCCATGGCA CCGTCAGCGG AAAAAGGTGG TGGCTCTGCC GGGCCACCAC
CCGCGGTCAA AGCCATCTTG TCCCAATTTG GCTCGGGCAA GGAGGAAGAC AAGTTGAGTG
CGTATTTGAA GCTCCTTAAA GTCGGTCCAA CCTTGCTGCG CTACGTGCCC GGTGAAAAGG
CCAGTGATCT ACGCACATGG TTGGAAGCGT ACCGCTACTG GAATCAAGGG GGTAAAAGCA
ATGTGCAGGC CATGTTGGCG TTGATTGCGG ATCGGTGTCG GGATCAACCG TCCGCCGTGT
TGACCGCTTT ACCGCCTCTG CAAGTCACTC CGGATATTGG TCTGATCCAT CCAGTGCGTA
GCCGACAACA ACAACAAGAC GAAACGAAAG CTGCTATCTT TACCCAGCCA CAATACTTTG
AATCTCCAGC GGAATACCTG GCGTGGCGAT TGAGTGCGAA TACCCAAACG CTAGCGGCGC
AACAGGGTTT CGTTTTGGCC CCGGATGACG CTCCTCGGGT AGCCGTACTC CTGTACCGCA
AACACGTTAT TACGGAACAG CGTTATTTGG GAGATCTCAT TCGACAAATG GAACAAGATG
GATTACTGCC CATACCCATT TTTATCAACG GCGTCGAAGC GCATACCATT GTGCGTGATT
TGTTGACGAG CAATCACGAG CAAAAACTGG TGCGTGACAG GAAACTCCGG CGTGATTCGA
CCTATCAGCC GTCCCAAGCC GTTTCGGTGG ACGCCATTGT GAACACGATT GGGTTTCCCC
TGGTAGGGGG ACCCGCGGGA TCCATGCAAG CCGGACGGAA CGTGGCCGTG GCCGAGACCT
TGCTAACAAA CATGAACGTA CCTTACGTGG TAGCTAGTCC ACTATTGCTC CAATCTATCG
CACAATGGAA GACCAATGGA GTCTTAGGAT TGCAGTCAGT GGTTCTGTAC AGCTTGCCCG
AACTGGACGG CGCTATTGAC ACTGTCGTTC TTGGCGGATT GGTGGGCGAT AAGATTGCGC
TGGTTCCGGA ACGCGTGCGC AAATTGAACT CTAGGGTGAA GAATTGGGTG GAACTCCGGC
GGACGCCACC ATCTGAGAGA CGTATTGCCA TTGCCTTGTA CGGCTTTCCA CCCAACGTGG
GAGCAGTCGG TACCGCGGCC CTGCTGGACG TGCCACGGTC TCTAGACGCC CTCCTGAGAC
GGCTTGAAAA GGAAGGATAC CGTGTGGGTG ATTGGACATC CGATCCGAAT GCTTGCGGAG
AAAGTTTAGT GGCGGCGTTG GCCACCCTGT GTGAAAACCC GGTCATTACA GCCGGCGCGG
ACCGTATGCA AGAAGCGATC GAGAGCAAAA TTGCCCGTGC CACGGCCGGA GACTCGACGG
TAGCCGCTAC TCTAGCGCTG CCGGGAGGTG GACTCGGAGG AGCCCAGGTC GTGGCGAAAG
ATATATCGAT CGATGAACTC GAAGAAATGC TGGGAAGCTA CATGATGAAA AAAGTGCGGC
GAGCCTGGTC TGAGAAAGAT CGCGGTCCCG GTGTTACCAA GAATGGCAAG TTCGCTGTAG
CAGGGCTCCA ACTTGGAAAC GTGTGGATTT TCGTCCAGCC TTTGTTAGGC GTCGAGGGTG
ATCCTATGCG TTTGCTGTTT GAAAGAGATC TGACTCCACA CCCACAGTAT TGTGCGACGT
ATGAATGGCT ACGGCGTCCC AAGGCTCTGG ATGGGCTAGG GACACAAGCA TTGATTCACT
TTGGAATGCA CGGCACTGTG GAATGGCTTC CCGGGCAGCC GCTAGGCAAT GATCGCAAAT
CATGGAGTGA TGAATTGCTT GGTGGCCTCC CAAATCTTTA TGTGTATGCT GCAAACAACC
CGAGCGAGAG TATCCTCGCC AAGCGTCGGG GGTACGGAAC TCTAGTGAGC TACAATGTCC
CTCCGTATGG TCGAAGCGGA CTGTATCTTG AGCTGGCTAA TTTGAAAGAC TTGGTCGAGG
AATATCGATC GGACGAAGGA TCCAATGGAT CGAATCGAGA ACTTTTTGAA ACTATTTACG
ACTTGGCCCA AAGAAGTGGT ATGGTAAACG ACGTTCCGTT GATGTGTGAT TCCAAAAATC
CTTTTGATAT TGATTGTGAG CAGCAGTCAA ACGTCCTCGA GTCGTTGCCA GCCGATGTGT
GTTCCGATTG GGTCGTGCGA TTGTCTGATT ATCTGAATGT TCTGCAAGAT CGCCTGTTTT
CCAGTGGACT ACACGTTTTC GGGCAAAGCC CGTCCGACGA AGACCTGGTG TCTTATCTAG
CGGCTTACTT CGGAGAGCAA CTATCGGAGA GCGATTGTCG TGATCTAGTG ACCAAGTGGC
GCGAAACATC AAAGCAGAGC GAGAAAAGCC AAAATGTTTT CACCTCTTTC TTCCAATTTC
TCGAATTTGT TGCATTTGGG GAAACCAGTT CAGATCCATC TTTCTCTGAA CAAAGCATCT
CCGAGCGGGC AATGACGATT GCAGGACTTC TAGATCGTTC TTCGGACGAA CTCCAATCTG
TGGTAAAGGG TTTGGACGGA GGATATATTC CTCCTGCGCC GGGAGGGGAT TTGTTGCGTG
ATGGACCGAG CGTGCTGCCT ACCGGACGCA ACATTCATGC TCTTGATCCG TATCGAATGC
CGTCCGCTGG GGCTTGGGCC CGCGGTCAAA AAGCAGCGCA AGAAGTCATT CGCCAGCACC
AAGAGAATAA TGAAGGCCGA TTTCCGGAAA CGATTGCTGT TACGCTCTGG GGTTTGGATG
CCATCAAAAC ACGTGGTGAA TCGGTGGCGA TCGTTTTAGC GTTGCTTGGG GCGAAGCCAG
TAAAGGAAGG AACTGGTCGT ATCGTTCGGT TTGATTTGAT CCCTTTAGAA GAGCTTGGCC
GGCCAAGGAT TGATGTTTTA GCCTCCCTTA GTGGCATATT CAGGGATTCT TTTGCCAACA
TCGTAGACCT ACTTGACGAT ACTTTTCAAA GAGCAGCTCA GGCCGACGAA TCAGACGAAA
AGAACTTTGT TAAGAAGCAT ACCAAAGAAC TGATAGCTAG TGGTGTAAAA GATGGAGCTG
CTGCAAGATT GTTCAGCAAT CCACCGGGCG ACTACGGAAG TATGGTGAAC GAGGTTATAG
GAACCGGAGA TTGGGAAGAT GAGGAGAGTT TGGGAGAGAC ATGGAAAGGA CGGAATGTTT
ACTCTTACGG TCGAAAAGAA GGACAGAGCG GAACTGGGGG GACTGCTCGT CCTGCTGTTC
TTAATAAGTT GCTGGCAACG ACCGAGCGGG TCGTTCAAGA GATCGATAGT GTCGAGTATG
GTCTTTCCGA CATCCAAGGT ATGTGAAACA AAGACTGGAA ACCTTTTGCT CAGACTGTTC
TCACCAATTC TGTTTTTCTC TTTGTCAATT AGAGTATTAC GCCAATACAG GAGGTACGAA
TTGTCGCCAA ATATAAAGTC CACGTTGTTG ACGCAATTGA GCTTATGACT AACATATGCT
TTTGCCTGTA GCGCTGAAAA AAGCGGCGGA AAATAGAAAA GAGATTGATC CGAAGACGGG
GAAGAAACGG AAAGTATCTA TATCGGTAAT AGAGGCATTT GGTGGATTTG ACGAGAACGC
TCTGGTTCCG GTCAAAGATG TCGAGGAAGT GCTTAGGTTA GAATACCGAA GCAAATTCCT
TAATCCAAAA TGGCGAGATG CAATGCTAAA GCAAGGGTCT GGTGGAGCAT ATGAAATCTC
TCAACGGATG ACAGCAATGA TTGGTTGGTC AGCGACGGCA GAGATTGATA ACTTTGTCTT
TGACCAAGCT GCTGAACGTT ATGCACTTGA TGCTGATGTC GCCAAACAAC TTCAACGCGC
CAACCCGGAA GCGTTCAAGA ATATAGTGAG GCGGCTGCTT GAAGCTTCGG GTAGAGGTAT
GTGGTCAACG GACACTAGTA CGTTAGATAA GCTGAAGGAT CTTTACGCCG ACGCGGACGA
CATAATCGAG CAAGGGTCCG ACTTTCGGGC AAAGATCAAG CAAGAAGCAT AATAATACGT
CGGAACGCCA ATGCAGTCTA GCCCAAAGCC CCTCCAAATG TTGATAAGAA TACATAGTTT
CTATTTGGTT
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| Protein sequence | MQIDRIIIAF GIVGVTLCGN VVDGLVPVQT RSTRTLLGSV RSARNPAGSR PCHAAPTFTR
LAAVAVHDED HAVSPQPKKH NTARKPKIVL VAGFESFNRE LYSQAARDLD VDLTVFADSD
IRVPPTTTTT TVRDAHDLAV NPDFASAVRQ ADAFIGSLIF DYDDVLAVQS VLPAVQGPRL
VFESATELMT FNTVGSFSMA PSAEKGGGSA GPPPAVKAIL SQFGSGKEED KLSAYLKLLK
VGPTLLRYVP GEKASDLRTW LEAYRYWNQG GKSNVQAMLA LIADRCRDQP SAVLTALPPL
QVTPDIGLIH PVRSRQQQQD ETKAAIFTQP QYFESPAEYL AWRLSANTQT LAAQQGFVLA
PDDAPRVAVL LYRKHVITEQ RYLGDLIRQM EQDGLLPIPI FINGVEAHTI VRDLLTSNHE
QKLVRDRKLR RDSTYQPSQA VSVDAIVNTI GFPLVGGPAG SMQAGRNVAV AETLLTNMNV
PYVVASPLLL QSIAQWKTNG VLGLQSVVLY SLPELDGAID TVVLGGLVGD KIALVPERVR
KLNSRVKNWV ELRRTPPSER RIAIALYGFP PNVGAVGTAA LLDVPRSLDA LLRRLEKEGY
RVGDWTSDPN ACGESLVAAL ATLCENPVIT AGADRMQEAI ESKIARATAG DSTVAATLAL
PGGGLGGAQV VAKDISIDEL EEMLGSYMMK KVRRAWSEKD RGPGVTKNGK FAVAGLQLGN
VWIFVQPLLG VEGDPMRLLF ERDLTPHPQY CATYEWLRRP KALDGLGTQA LIHFGMHGTV
EWLPGQPLGN DRKSWSDELL GGLPNLYVYA ANNPSESILA KRRGYGTLVS YNVPPYGRSG
LYLELANLKD LVEEYRSDEG SNGSNRELFE TIYDLAQRSG MVNDVPLMCD SKNPFDIDCE
QQSNVLESLP ADVCSDWVVR LSDYLNVLQD RLFSSGLHVF GQSPSDEDLV SYLAAYFGEQ
LSESDCRDLV TKWRETSKQS EKSQNVFTSF FQFLEFVAFG ETSSDPSFSE QSISERAMTI
AGLLDRSSDE LQSVVKGLDG GYIPPAPGGD LLRDGPSVLP TGRNIHALDP YRMPSAGAWA
RGQKAAQEVI RQHQENNEGR FPETIAVTLW GLDAIKTRGE SVAIVLALLG AKPVKEGTGR
IVRFDLIPLE ELGRPRIDVL ASLSGIFRDS FANIVDLLDD TFQRAAQADE SDEKNFVKKH
TKELIASGVK DGAAARLFSN PPGDYGSMVN EVIGTGDWED EESLGETWKG RNVYSYGRKE
GQSGTGGTAR PAVLNKLLAT TERVVQEIDS VEYGLSDIQE YYANTGALKK AAENRKEIDP
KTGKKRKVSI SVIEAFGGFD ENALVPVKDV EEVLRLEYRS KFLNPKWRDA MLKQGSGGAY
EISQRMTAMI GWSATAEIDN FVFDQAAERY ALDADVAKQL QRANPEAFKN IVRRLLEASG
RGMWSTDTST LDKLKDLYAD ADDIIEQGSD FRAKIKQEA
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