| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43619 |
|---|
| Symbol | |
|---|
| ID | 7197340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | + |
|---|
| Start bp | 1001518 |
|---|
| End bp | 1002334 |
|---|
| Gene Length | 817 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177735 |
|---|
| Protein GI | 219111967 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCGAAAAAA AGAAATCCGA TTGATGTCTG CGCGCTTACT ACTAGAGACA ACATTCCCTT
AGAAAGTAAA AAACCAAGTC TACGTTTCCA TATGACGACC GCGTTAATAT CGTCGCATGT
CCTGGTGCTG GTCACTATGT GGCTTATTGG CGTGCAATGT TTCCCTGTTC AAAGTTACTT
GGTTTCCGCA GGGTCACATC ATCGTCGAGT TCCAACCCCT CGGCCAACGC GAGGCGGAGT
TAGCTTTTCT TCTCGACGCG CCAACACGTC GAACGACATC CGCAGCGAGG ATACGCTTTC
TAACAGTAAG AACCGAATTC CTGTATCTGC CGAAATTGAA ATCCCTCTGG CCGCCGAAAT
CGCGTTCGAC GCCTTCGCCG ATTTACCGAG ACAAGCCACC TGGGCAGATT GGCTCAAGTC
GGTCGAATAT ATTTCACCGG ATAATCCCGA GACGATGTGG AAAATGAGTT ACTTGGGACT
ATCGTACTCG TGGAAAGCTA TCAGTACGCG GCAGGAGCGT CCATTCGTTA TCGAATGGGA
GTCTACATCG GGATTGAAGA ACTTTGGGAG GGTTGATTTT ACAAAGCTGG ACTCGGATCG
CACGCACATG AAATTGACCT TGACATTTTT AGCTCCCCGA CTACTCGTCA AAATGCTGGG
ACAGCAAGGG GCGATCGCTC GGCTGGTGGA AAAGCGAATG CTCCAAACCA TGCTGCACAA
CTTTCGGGAC ATAGTGGTTG TTGAAAGCAC TAGCAATCAA CAGCCGCAAT TAAAACCGTT
GAGCATCTTT CCAAAACAAA ATGCGGAGTC AGATTAG
|
|---|
| Protein sequence | MTTALISSHV LVLVTMWLIG VQCFPVQSYL VSAGSHHRRV PTPRPTRGGV SFSSRRANTS
NDIRSEDTLS NSKNRIPVSA EIEIPLAAEI AFDAFADLPR QATWADWLKS VEYISPDNPE
TMWKMSYLGL SYSWKAISTR QERPFVIEWE STSGLKNFGR VDFTKLDSDR THMKLTLTFL
APRLLVKMLG QQGAIARLVE KRMLQTMLHN FRDIVVVEST SNQQPQLKPL SIFPKQNAES
D
|
|---|
| |