| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43594 |
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| Symbol | |
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| ID | 7197318 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 907679 |
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| End bp | 909649 |
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| Gene Length | 1971 bp |
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| Protein Length | 553 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178030 |
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| Protein GI | 219112557 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATCGC AGCTCAGGTA CCATGACTGG ACCGTACACG GCAGTCGATC GAGTTTGGCG
GCGGGTCCCC CCTGGAGCGT GACCGGACTG ATTCGGAGTC GCGGAAAGCA CCCCACGTTC
ACGCCCCCCT CTCCAATTTC TCCACTTCAC TGTGCGAACG CGGTAGAAAG GGTAAGCCAC
AGAATAGGCT ACGTATTTGT GACTAACAAA ACAGCAGTAC CATCCATGGT ACTACCATGT
GGCACGCCGT AAACGCGAAT GCAAAGAATT TCGAACGCGA GTCACTCAGA TCGTCGAGTC
GTTCTCACCA CCGCATCCGC ACTGGCATGT CCGTCGAAAC TAGTCTCTGA TTCCTCAGCT
CTTGCCTCCA CACTACATTC ATAGACACAC GTATTGTTGC ATCCTTGCAC TCTTTACTGG
TGACAGCATC CATTCATTCT TTCCGTCGTC GTCGTCGCTG CACCTCATTG CCATGCCACG
TTCGTACGCT TCGCTCCCGG GCGTTTCCGG GATGTTGCTA GTCATTCTGA TCGCGTCGGA
TCGCTCGTTG CAATCCACAG CGTGGCAATT AAATACAAAT CTGGAACCTA GCGCCACCGG
GTCGACCCTG CACCGGCGTC ATGCGATTGA ACGCATGGTG TCGGGTGCTG CGGTGCTAGG
TGGATTGGGC GGGGGACTCG GGACGGTACA CGCCGCCGTA CCGTCAAACG GACTCACCTT
TGACTCGTAC CGGGTCGTTC CCGATTCCAC TGCCGCACTT AATCCTAGTC TGTTGCCCAT
TCAGGTTCGT ACCTGTCCTT CGTTATTGAG TAGAGGAGAC CCGGTGTCAG TGTTGTTGTT
GTTGTTGTTC GGCGAAGCAC CATCTCACGC TTTTCGCTCG GCCATCGTCG TCGTTCTATT
GTTGAATTCC TTGTACAGAA GGCGGATTTT CTGCAAACAA TATCGTCGCG CAACGGCGGA
GCCTTGTGGT TGGGCGAGCA CCACAACTCC GTCAAGGACC ACAATTTGCA AGTCGACATT
CTCCGCCAAG TGCATCAACT CCGCCAAGCC ACCGGGTCCC CCACAGCGGT AGGACTGGAA
CAGGTACAGA TTAAGTTTCA GCCTGTTCTG AACGACTACC TGGCCGGGAA GATATCCGCC
GCCGAAATGC GTCAACGCGT TGAATGGGAC ACGCGCTGGA TGTGGCCGTT CGAAGTGTAC
GAGCCCGTTT TTGCCACGGC CAAGGAATTG CGTATGCCTC TAGTGGCACT CAACGTCAAT
TCAGAAGATT TGGTACTCGT CGAAAAAGGA GGTCTACCGG GGTTGCCGAG TGAACGACTC
CGGCAGTATA TTAGTGACGC GTACGTTGAT AGCGTGGTCG GAGATTAAAA TCCGTGTACG
ATTGGGTTTT TTCTCGTTCC CATCCATTGC TAATTTTGTT ATTCTCTGCT ACAACACTAC
AGACCTGGTT TTGCAGCCTT TGCCAAGCCT CGTGAATTCG GAACCTATGT CGACTACGTT
ATCCGACCCT CCTACGATCT ACATGAAGCA ATGGGTCTGC TCAAGTACAG CATGTCGGGG
GAAAAGTTGG ATGAGCCCAT GCCCTTTCGC AATTTCTTCA GCGGGAGAAT TTTGTGGGAC
GAAGCTATGG CGAACGCCGC CTACTCCTGG ACCAAGGCGA ATCCCGGTGG ACTCCTCGTG
GGTTTGGTAG GGGCGGATCA CGTCAAGTTT CGCAACGGAA TTCCGGGGCG ATACGCCCGG
CTTGCGCCGA ATGACGCCGC GTGTGTTTCA GTTCTGCTGA ACCCGACATT GATTGATACG
CGACCGTCGG GCACGGTAGG CATGGAGGGT GCCGTTTCGG ATCGTCCGGA AACCATTACT
CTGCAAATCC GTTATTTGAA AGATGACGTA CAATTTGATT CCCCGGAACG AACCTTGCCA
TCGTCAACGG GTGGTGTCCT GGCTCTCGCC GATTACTTGG TGGTAGGTTG A
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| Protein sequence | MISQLRYHDW TVHGSRSSLA AGPPWSVTGL IRSRGKHPTF TPPSPISPLH CANAVERQYH
PWYYHVARRK RECKEFRTRV TQIVESFSPP HPHWHLLPPH YIHRHTYCCI LALFTGDSIH
SFFPSSSSLH LIAMPRSYAS LPGVSGMLLV ILIASDRSLQ STAWQLNTNL EPSATGSTLH
RRHAIERMVS GAAVLGGLGG GLGTVHAAVP SNGLTFDSYR VVPDSTAALN PSLLPIQKAD
FLQTISSRNG GALWLGEHHN SVKDHNLQVD ILRQVHQLRQ ATGSPTAVGL EQVQIKFQPV
LNDYLAGKIS AAEMRQRVEW DTRWMWPFEV YEPVFATAKE LRMPLVALNV NSEDLVLVEK
GGLPGLPSER LRQYISDAPG FAAFAKPREF GTYVDYVIRP SYDLHEAMGL LKYSMSGEKL
DEPMPFRNFF SGRILWDEAM ANAAYSWTKA NPGGLLVGLV GADHVKFRNG IPGRYARLAP
NDAACVSVLL NPTLIDTRPS GTVGMEGAVS DRPETITLQI RYLKDDVQFD SPERTLPSST
GGVLALADYL VVG
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