Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43517 |
Symbol | |
ID | 7197558 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 695660 |
End bp | 699603 |
Gene Length | 3944 bp |
Protein Length | 1255 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177665 |
Protein GI | 219111827 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0220601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCTA CCAGTGATTC TGAATCGGCG ATTCAGGCTG TTACCAAAGA TGGCACGCGC CAGTCCGAAG GCGAAGCAAC AAAAACGGCA TATATGGAAA GCACCATAAA TCTGGCTTTG CTGGACCCCC CTCGATGGGG ATGGACTGTA GCCGGTGGCA TCGCCGATGT CTTGCCCCCA CATGAGGTAC GAACTAGCAT GTAGATTTGG ATGTTTGACT TGTTAAGCAT ACTGTGCAAG AATTCCTTTG GTGACTCTTG TTGCCTCATG TTCATGCCTC TTTTTTCTTC CCTCACAGCG AGCCCGACGT AAATCTAGCA AGCGAGCCTT TTTACAAATG AAAAGGAAGC GAAGTCGGAA CGAAGCGAGT GCTGGAACGT CAAGCTTCGC GAAGAAGCAG GCTATAGATG GTGCAGAGGA TACTGGGAGG TCTTCGAAGC AAATTATTTC AACTGTCATA TCGGCTTCCT CATCAAGTCC AAGGCACGAA TCGATGGATG CGCTCACCGC TAAAGGAGAA GAGGCAGCCT CAAAATTCAC GACTTTTCCG GCGGAAAGTT TAATAGCAAC TACGAAAGAA ATTTTGTACG GTCAAGAAGA GAAGCAAAAC GTGGATAAGG GCACAACAGC AGAACAAACA CATGCCTCCG TCGACACAAT TAACGAAACC ATGATACCAA GACGATTTTC GGCACTGTGC AACGATTCCG CAAGCGAAGT AGATATTTAC ACATATCATA GAGGAAGAGA AGGTTTTGAA ATGCGTGTTG AGGAAACTGG GGAACTCATG TGTGATATGG AACCGACGGA CACGAACTAT ACCTGGGACG AGCCAAAATT GGTAGCCCAT GTGACTATTT CGTTTGCAGT GGAGGATGCC TTCGATGATC TAAACAGTGT CCAATTGGGC AACGAGATTG GTGACCAAAG ATATTTTCGC GAAAAAATAT CTTGGGACTT AACGGATCCA GAAACTCCGA CACCACTGGC ATTTGCAACG GAAGTAGCAG AGAACTTTGG ATTGAGTTTT GGGCAAACAC TTGACTTGGA AAACTCGATA CAACGGCAGT TGCACTCTTT TGTGAAAGAA AATTGCAGCT ACGCGATACC TACAGCTACA AAGGAAACGT TTGGACAAGT TCGAGAGGCG ACTTCCTCCG CGACGATTCC AACTTTGTAC GGACAAGTAA ATGGATTTCG AAGTGGTGGT CTACGTCTCC GAGGGGTACA CAAAGCAAGG CCACCTTTAC GAACATCCTC TATAATTGGC AGAGGTTCGA CTTTAGTTTT CAATGAAAAG GGGGGTGTAG GGAAGTGTCC CACCAGAGAC CGTGCATCCG AGACAAAAGT GGAACAGATC TATGTGGACG AAGTCCGGCA GCGACTGCGT CAATATTTGG AACGTCAAGT GCGCGAGCAA TCATCTAAAC AAACGGACGA CGCCGCAACA GTTACCAACA AGACTTATGA AGGACAGAGT GTTTTACTGG GTGAAAGTAT ATGTCACCTG TGCGATGAAG AAAAACCCGA ATGTGTGAGG TTTGCCTGTG GAGTCAATGG TCATTCGTAC TGTGCGCATC ACTTCGAAGA AAACATGCCG TTTCCAATCA GTGAATGGAT GGAACTTAAA CAAGTTTACT GTCCAATTTG CTCCTTGACT TGCACGTGTT CGATCTGCAA GCAGACTGTT GCCTCCGTCG CGGCCGAGCT GAAACAACGG ACGCTCGACC AAGATCTCTC AGTCGATATG ACTGTATTTG ATGACATTTT ACAGGTTGTT GAAGAATCAT GCCTTGACGT TAAATCAAGG CTGCAACGCA AAATTCGTGG TCGAGTCAAT GGGCGACGCC CGAAAGTTGG CAAAATCCCA CTTTCCGATT TTCCCAGGGA AGTGTGCAAC GGAGTCGACT TAGATCCAGG GTCTATGTTA GACTATCGGA CTGTATATAC TCCAAATGGC TTTTTCCTGA TCGACCAGGT CACAAGTGTC GACGACTTTG GTGAGATTAT GCCCAAGGAA AATGTGGCCA CTTCGGCTGC TTCGTTGATC GAGGACGGTA GCGTAGATTA CTGCAATGTA TGTCGGAATC ACGGAAATTT ACTTTGTTGC GACTACTGCC CTCGTGCGTT TCACTCCGAA TGTATACACG TCAAAGATGA AGAGCTCGAC TCAGAAGCTC CATGGGAATG CCCGGTTTGT CTGAAAGAGA AGAAAGGTTT GCCCAGTGAC AAGATATCTG GTTCTAAGTC GTTAGCCCTC ATTTGCGCAG CTTATGACGA TTTGGGTTGC AATGTTGGAG GCAAAAGTAT CGAAAACTTG CGGACTCTAA GTATTGTACA CGAAATGGTG ATCCAGCTCA TCGATTATGA CTTCGGGTTT ATCTTTGGAC AACCCGTTGA CTCTATCGCA GTACCTACCT ATTGCGATAT TGTTGAGAAC CCCATTGATT TGGGAACCAT TGCATCCCGC CTCATCAACG GAAGTTACAA GGGACGACTT GGCGAAAGAA AGGGGTCTCT GGAAGACACA GTACTGGCGG TTTTGAAAGA CATTGAGCTC GTTTGGCACA ACTGCTTTAT TTTTAACTGT GAAGGGAGTG CAGTATACCG AATGGCCGAG GTTCAACGTC GGCGATCGCA TAACATTCGC CGCGAAAGCT TTAGCAACAA GTTGACAGAC TATGTTAGGA CGGAATTGGA GAATTTCATT CTTTCTTGTA AACGCCATCG CTTGATCAAT GCGAAGGGGA AGCCAGCGAG AAACAAAATT TCTTCCAGTG AGCAAGGGCG ACATAAAATC TCAGTCGCTG GGCGAAGCAG CAACGGGCGT CTCATTGCCG TCCTCGATCC GGATACCGGG CAAGTAGTCA AGATCTATTC TACCGAGCAG GCAGCTATAT TGGCAGTTCA ACTCTTTTTG AAAATGAAAC ATGCACATGA GTGGGATGAT TTATGCAACG ACGTGAGTCA GCGTGTACGA AACATTATTA AGAGGAGTTC CAATGAGCCG AATGCCCTCC TTTTTGGGTA TCGATGGTTA TACTTTGACG AGCTTAAAGA AAACAAAGTT ACTTTGGGAG AAATAAGCGC CTGTGAACTT CCTGTGAAAG CAAGGCCAAC ACCGTTGGAC GACCCCATTT TGAAGCTAAA TCAGCAAACA GCTCCTCTGG ACATTATCGA GTTGAGATAC AAATCGCACT CTTTCACATT TCTCTCAGTT GAGCAGGCTC TGTCCCATGT CGGCGGTACT TTCCCGCCAC CAGACAGTCT ACGAGAAAGG TTTGTTAAGC TGTATCCTGG AGAAAAGTTT GTTGACGACA GCGGAGGAAC GTGGCATCGC CTACTGATAA GGAAGGGGTT CAACCAGAAT CCGCAGGAGA TGGTTAGCGA CCACGTTTTT CTTCCGCAGA GTGTTGCTTT TATCAAAGTT GATCTTGCTT CAGGAAGAAC CTTAGTTGGG TTCCATTCTA TTGCCTCTGC GTACGAGGAC TGGTTACTGA CCATCGAGCA TTCTCCTGTC GTACAAGCAA AAGAGGATAA GACGTTAAAA TCGTTCGCAA GTTCTTTTAT AAATGGCGAT CGGCACGTTG CTGGTCTCGT TTGGAAAAGA CGAAAAAATC TTGTCGACAG GAATGTTAAG ATAGACCTAA GCGGCTTTTC GAAATCAGAG AACGATGACC CCACCGAAGA CTCTAAACCA TCGACTGAAA ATCCTTTGGA GGTTTCAAAG AAAACCAACG GCGGCCAAAT ACTTGACAAT ATCGGAATAG AGCTCTTTTC CGGTCACAGT CTGTCACCCA TTGTGTCTCA AAACGAGGAC AAGGCCAAGC CATCACCTTT GAAGGCAGAC GTAGACACCA CTAACTCCAC AAACGACTAA CGAAGGCAAT GACCGTGTCC ACTTCAATCG TTTTGATGTA TCTCTGGACG TTGCCTAGTG TGGT
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Protein sequence | MTATSDSESA IQAVTKDGTR QSEGEATKTA YMESTINLAL LDPPRWGWTV AGGIADVLPP HERARRKSSK RAFLQMKRKR SRNEASAGTS SFAKKQAIDG AEDTGRSSKQ IISTVISASS SSPRHESMDA LTAKGEEAAS KFTTFPAESL IATTKEILYG QEEKQNVDKG TTAEQTHASV DTINETMIPR RFSALCNDSA SEVDIYTYHR GREGFEMRVE ETGELMCDME PTDTNYTWDE PKLVAHVTIS FAVEDAFDDL NSVQLGNEIG DQRYFREKIS WDLTDPETPT PLAFATEVAE NFGLSFGQTL DLENSIQRQL HSFVKENCSY AIPTATKETF GQVREATSSA TIPTLYGQVN GFRSGGLRLR GVHKARPPLR TSSIIGRGST LVFNEKGGVG KCPTRDRASE TKVEQIYVDE VRQRLRQYLE RQVREQSSKQ TDDAATVTNK TYEGQSVLLG ESICHLCDEE KPECVRFACG VNGHSYCAHH FEENMPFPIS EWMELKQVYC PICSLTCTCS ICKQTVASVA AELKQRTLDQ DLSVDMTVFD DILQVVEESC LDVKSRLQRK IRGRVNGRRP KVGKIPLSDF PREVCNGVDL DPGSMLDYRT VYTPNGFFLI DQVTSVDDFG EIMPKENVAT SAASLIEDGS VDYCNVCRNH GNLLCCDYCP RAFHSECIHV KDEELDSEAP WECPVCLKEK KGLPSDKISG SKSLALICAA YDDLGCNVGG KSIENLRTLS IVHEMVIQLI DYDFGFIFGQ PVDSIAVPTY CDIVENPIDL GTIASRLING SYKGRLGERK GSLEDTVLAV LKDIELVWHN CFIFNCEGSA VYRMAEVQRR RSHNIRRESF SNKLTDYVRT ELENFILSCK RHRLINAKGK PARNKISSSE QGRHKISVAG RSSNGRLIAV LDPDTGQVVK IYSTEQAAIL AVQLFLKMKH AHEWDDLCND VSQRVRNIIK RSSNEPNALL FGYRWLYFDE LKENKVTLGE ISACELPVKA RPTPLDDPIL KLNQQTAPLD IIELRYKSHS FTFLSVEQAL SHVGGTFPPP DSLRERFVKL YPGEKFVDDS GGTWHRLLIR KGFNQNPQEM VSDHVFLPQS VAFIKVDLAS GRTLVGFHSI ASAYEDWLLT IEHSPVVQAK EDKTLKSFAS SFINGDRHVA GLVWKRRKNL VDRNVKIDLS GFSKSENDDP TEDSKPSTEN PLEVSKKTNG GQILDNIGIE LFSGHSLSPI VSQNEDKAKP SPLKADVDTT NSTND
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