| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43517 |
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| Symbol | |
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| ID | 7197558 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | + |
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| Start bp | 695660 |
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| End bp | 699603 |
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| Gene Length | 3944 bp |
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| Protein Length | 1255 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177665 |
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| Protein GI | 219111827 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0220601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCTA CCAGTGATTC TGAATCGGCG ATTCAGGCTG TTACCAAAGA TGGCACGCGC
CAGTCCGAAG GCGAAGCAAC AAAAACGGCA TATATGGAAA GCACCATAAA TCTGGCTTTG
CTGGACCCCC CTCGATGGGG ATGGACTGTA GCCGGTGGCA TCGCCGATGT CTTGCCCCCA
CATGAGGTAC GAACTAGCAT GTAGATTTGG ATGTTTGACT TGTTAAGCAT ACTGTGCAAG
AATTCCTTTG GTGACTCTTG TTGCCTCATG TTCATGCCTC TTTTTTCTTC CCTCACAGCG
AGCCCGACGT AAATCTAGCA AGCGAGCCTT TTTACAAATG AAAAGGAAGC GAAGTCGGAA
CGAAGCGAGT GCTGGAACGT CAAGCTTCGC GAAGAAGCAG GCTATAGATG GTGCAGAGGA
TACTGGGAGG TCTTCGAAGC AAATTATTTC AACTGTCATA TCGGCTTCCT CATCAAGTCC
AAGGCACGAA TCGATGGATG CGCTCACCGC TAAAGGAGAA GAGGCAGCCT CAAAATTCAC
GACTTTTCCG GCGGAAAGTT TAATAGCAAC TACGAAAGAA ATTTTGTACG GTCAAGAAGA
GAAGCAAAAC GTGGATAAGG GCACAACAGC AGAACAAACA CATGCCTCCG TCGACACAAT
TAACGAAACC ATGATACCAA GACGATTTTC GGCACTGTGC AACGATTCCG CAAGCGAAGT
AGATATTTAC ACATATCATA GAGGAAGAGA AGGTTTTGAA ATGCGTGTTG AGGAAACTGG
GGAACTCATG TGTGATATGG AACCGACGGA CACGAACTAT ACCTGGGACG AGCCAAAATT
GGTAGCCCAT GTGACTATTT CGTTTGCAGT GGAGGATGCC TTCGATGATC TAAACAGTGT
CCAATTGGGC AACGAGATTG GTGACCAAAG ATATTTTCGC GAAAAAATAT CTTGGGACTT
AACGGATCCA GAAACTCCGA CACCACTGGC ATTTGCAACG GAAGTAGCAG AGAACTTTGG
ATTGAGTTTT GGGCAAACAC TTGACTTGGA AAACTCGATA CAACGGCAGT TGCACTCTTT
TGTGAAAGAA AATTGCAGCT ACGCGATACC TACAGCTACA AAGGAAACGT TTGGACAAGT
TCGAGAGGCG ACTTCCTCCG CGACGATTCC AACTTTGTAC GGACAAGTAA ATGGATTTCG
AAGTGGTGGT CTACGTCTCC GAGGGGTACA CAAAGCAAGG CCACCTTTAC GAACATCCTC
TATAATTGGC AGAGGTTCGA CTTTAGTTTT CAATGAAAAG GGGGGTGTAG GGAAGTGTCC
CACCAGAGAC CGTGCATCCG AGACAAAAGT GGAACAGATC TATGTGGACG AAGTCCGGCA
GCGACTGCGT CAATATTTGG AACGTCAAGT GCGCGAGCAA TCATCTAAAC AAACGGACGA
CGCCGCAACA GTTACCAACA AGACTTATGA AGGACAGAGT GTTTTACTGG GTGAAAGTAT
ATGTCACCTG TGCGATGAAG AAAAACCCGA ATGTGTGAGG TTTGCCTGTG GAGTCAATGG
TCATTCGTAC TGTGCGCATC ACTTCGAAGA AAACATGCCG TTTCCAATCA GTGAATGGAT
GGAACTTAAA CAAGTTTACT GTCCAATTTG CTCCTTGACT TGCACGTGTT CGATCTGCAA
GCAGACTGTT GCCTCCGTCG CGGCCGAGCT GAAACAACGG ACGCTCGACC AAGATCTCTC
AGTCGATATG ACTGTATTTG ATGACATTTT ACAGGTTGTT GAAGAATCAT GCCTTGACGT
TAAATCAAGG CTGCAACGCA AAATTCGTGG TCGAGTCAAT GGGCGACGCC CGAAAGTTGG
CAAAATCCCA CTTTCCGATT TTCCCAGGGA AGTGTGCAAC GGAGTCGACT TAGATCCAGG
GTCTATGTTA GACTATCGGA CTGTATATAC TCCAAATGGC TTTTTCCTGA TCGACCAGGT
CACAAGTGTC GACGACTTTG GTGAGATTAT GCCCAAGGAA AATGTGGCCA CTTCGGCTGC
TTCGTTGATC GAGGACGGTA GCGTAGATTA CTGCAATGTA TGTCGGAATC ACGGAAATTT
ACTTTGTTGC GACTACTGCC CTCGTGCGTT TCACTCCGAA TGTATACACG TCAAAGATGA
AGAGCTCGAC TCAGAAGCTC CATGGGAATG CCCGGTTTGT CTGAAAGAGA AGAAAGGTTT
GCCCAGTGAC AAGATATCTG GTTCTAAGTC GTTAGCCCTC ATTTGCGCAG CTTATGACGA
TTTGGGTTGC AATGTTGGAG GCAAAAGTAT CGAAAACTTG CGGACTCTAA GTATTGTACA
CGAAATGGTG ATCCAGCTCA TCGATTATGA CTTCGGGTTT ATCTTTGGAC AACCCGTTGA
CTCTATCGCA GTACCTACCT ATTGCGATAT TGTTGAGAAC CCCATTGATT TGGGAACCAT
TGCATCCCGC CTCATCAACG GAAGTTACAA GGGACGACTT GGCGAAAGAA AGGGGTCTCT
GGAAGACACA GTACTGGCGG TTTTGAAAGA CATTGAGCTC GTTTGGCACA ACTGCTTTAT
TTTTAACTGT GAAGGGAGTG CAGTATACCG AATGGCCGAG GTTCAACGTC GGCGATCGCA
TAACATTCGC CGCGAAAGCT TTAGCAACAA GTTGACAGAC TATGTTAGGA CGGAATTGGA
GAATTTCATT CTTTCTTGTA AACGCCATCG CTTGATCAAT GCGAAGGGGA AGCCAGCGAG
AAACAAAATT TCTTCCAGTG AGCAAGGGCG ACATAAAATC TCAGTCGCTG GGCGAAGCAG
CAACGGGCGT CTCATTGCCG TCCTCGATCC GGATACCGGG CAAGTAGTCA AGATCTATTC
TACCGAGCAG GCAGCTATAT TGGCAGTTCA ACTCTTTTTG AAAATGAAAC ATGCACATGA
GTGGGATGAT TTATGCAACG ACGTGAGTCA GCGTGTACGA AACATTATTA AGAGGAGTTC
CAATGAGCCG AATGCCCTCC TTTTTGGGTA TCGATGGTTA TACTTTGACG AGCTTAAAGA
AAACAAAGTT ACTTTGGGAG AAATAAGCGC CTGTGAACTT CCTGTGAAAG CAAGGCCAAC
ACCGTTGGAC GACCCCATTT TGAAGCTAAA TCAGCAAACA GCTCCTCTGG ACATTATCGA
GTTGAGATAC AAATCGCACT CTTTCACATT TCTCTCAGTT GAGCAGGCTC TGTCCCATGT
CGGCGGTACT TTCCCGCCAC CAGACAGTCT ACGAGAAAGG TTTGTTAAGC TGTATCCTGG
AGAAAAGTTT GTTGACGACA GCGGAGGAAC GTGGCATCGC CTACTGATAA GGAAGGGGTT
CAACCAGAAT CCGCAGGAGA TGGTTAGCGA CCACGTTTTT CTTCCGCAGA GTGTTGCTTT
TATCAAAGTT GATCTTGCTT CAGGAAGAAC CTTAGTTGGG TTCCATTCTA TTGCCTCTGC
GTACGAGGAC TGGTTACTGA CCATCGAGCA TTCTCCTGTC GTACAAGCAA AAGAGGATAA
GACGTTAAAA TCGTTCGCAA GTTCTTTTAT AAATGGCGAT CGGCACGTTG CTGGTCTCGT
TTGGAAAAGA CGAAAAAATC TTGTCGACAG GAATGTTAAG ATAGACCTAA GCGGCTTTTC
GAAATCAGAG AACGATGACC CCACCGAAGA CTCTAAACCA TCGACTGAAA ATCCTTTGGA
GGTTTCAAAG AAAACCAACG GCGGCCAAAT ACTTGACAAT ATCGGAATAG AGCTCTTTTC
CGGTCACAGT CTGTCACCCA TTGTGTCTCA AAACGAGGAC AAGGCCAAGC CATCACCTTT
GAAGGCAGAC GTAGACACCA CTAACTCCAC AAACGACTAA CGAAGGCAAT GACCGTGTCC
ACTTCAATCG TTTTGATGTA TCTCTGGACG TTGCCTAGTG TGGT
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| Protein sequence | MTATSDSESA IQAVTKDGTR QSEGEATKTA YMESTINLAL LDPPRWGWTV AGGIADVLPP
HERARRKSSK RAFLQMKRKR SRNEASAGTS SFAKKQAIDG AEDTGRSSKQ IISTVISASS
SSPRHESMDA LTAKGEEAAS KFTTFPAESL IATTKEILYG QEEKQNVDKG TTAEQTHASV
DTINETMIPR RFSALCNDSA SEVDIYTYHR GREGFEMRVE ETGELMCDME PTDTNYTWDE
PKLVAHVTIS FAVEDAFDDL NSVQLGNEIG DQRYFREKIS WDLTDPETPT PLAFATEVAE
NFGLSFGQTL DLENSIQRQL HSFVKENCSY AIPTATKETF GQVREATSSA TIPTLYGQVN
GFRSGGLRLR GVHKARPPLR TSSIIGRGST LVFNEKGGVG KCPTRDRASE TKVEQIYVDE
VRQRLRQYLE RQVREQSSKQ TDDAATVTNK TYEGQSVLLG ESICHLCDEE KPECVRFACG
VNGHSYCAHH FEENMPFPIS EWMELKQVYC PICSLTCTCS ICKQTVASVA AELKQRTLDQ
DLSVDMTVFD DILQVVEESC LDVKSRLQRK IRGRVNGRRP KVGKIPLSDF PREVCNGVDL
DPGSMLDYRT VYTPNGFFLI DQVTSVDDFG EIMPKENVAT SAASLIEDGS VDYCNVCRNH
GNLLCCDYCP RAFHSECIHV KDEELDSEAP WECPVCLKEK KGLPSDKISG SKSLALICAA
YDDLGCNVGG KSIENLRTLS IVHEMVIQLI DYDFGFIFGQ PVDSIAVPTY CDIVENPIDL
GTIASRLING SYKGRLGERK GSLEDTVLAV LKDIELVWHN CFIFNCEGSA VYRMAEVQRR
RSHNIRRESF SNKLTDYVRT ELENFILSCK RHRLINAKGK PARNKISSSE QGRHKISVAG
RSSNGRLIAV LDPDTGQVVK IYSTEQAAIL AVQLFLKMKH AHEWDDLCND VSQRVRNIIK
RSSNEPNALL FGYRWLYFDE LKENKVTLGE ISACELPVKA RPTPLDDPIL KLNQQTAPLD
IIELRYKSHS FTFLSVEQAL SHVGGTFPPP DSLRERFVKL YPGEKFVDDS GGTWHRLLIR
KGFNQNPQEM VSDHVFLPQS VAFIKVDLAS GRTLVGFHSI ASAYEDWLLT IEHSPVVQAK
EDKTLKSFAS SFINGDRHVA GLVWKRRKNL VDRNVKIDLS GFSKSENDDP TEDSKPSTEN
PLEVSKKTNG GQILDNIGIE LFSGHSLSPI VSQNEDKAKP SPLKADVDTT NSTND
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