| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43516 |
|---|
| Symbol | |
|---|
| ID | 7197203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | + |
|---|
| Start bp | 684463 |
|---|
| End bp | 685794 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177663 |
|---|
| Protein GI | 219111823 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.019532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAAAGGAAAA AGATCGCCTG GAAGATTCAT GTTCTAGCAC AAGATAGACA ATCGCTGACG
CAAGTGACTT GTGAATCAAA GATTGAAAGT CGCAGGCCTT ATCGCTCATT GTTGTGTCGC
CAGAGGGGCA ATACCGCCTT TATTGCTAGT CCTTTCCAAC GTCTCGGTAC CGTTCGTTTG
TAAATACCGA CCTTTTCTTG TTCACACACT TCCGTCACCT ATGATCAACA CCGATTGTTG
CCAGTAGCAA TGATCTCTAC ACCGAGATTA ACGCTTTACG CCATGTTGAC AATTTCACTC
GCGTTCTGGT TAATACCAGG CAAGCCCAGT CTAGGGTTTG CCTTCGCCGA TGCGGAACCT
GCCTTGGCAA CGAATCTTCA CCGTCGCCTT CCCACGGACG ATAGCACAAC TCGCCTCGGA
GAAGCCTTCC GTTTCGTTAC CGACTTTGTC TTTACGCGGC ACTCTCTCGC GTTCACCGGT
GAACAGCAGG GTCTACGGGT GATCGGCGCG GGTTTCCCAC GAACAGGCAC CAAGTCGCAG
GAAGCTGCCT TGCACTCACT CGGGCACCGA ATTTATGATT TGCGGTCCAT TCTGGAAAAC
CGGCACGCCC AACGATGGGT TGATGCCGCA AAAGCATGGA AGCAACGGGG TGACTTACAG
CCCAGCCACA AGCTTTTGCA GGAAATGGAA CATGCAGGAT ACACGGCCAC ATTGGATTTT
CCAATGAACC TATTCGCGTT GGCTTTTGCA GAATTACGAC CGCAAGCCAA AGTAATCTTT
TCAGTGCGAG ATAATGAGGA AAAGTGGGTG GAATCATGGG CGTACATTAC CAAAGTCCTC
GGCCATTTTA CCACCCGGCC TTGGAGTTGG ATTATTCCGC GCTTTGATTT CGCCGCCGAG
TTACTACTCA TACTACAAGA TTTTACATGG TGGGCCGGAG AGCACCAGAG CAATGTAGAT
CGGCCACTTC CATGGTTTGA AATTTTGCGC ACAAACCCAA TGTTGGATTC TCCAGAAGGG
AGGCAAGAAT GGATCGAACT GCACAGACGC TTCCAAAGGG AGTTGGAAGA AAGCCTACCT
CCTGACCGCT TACTGGTTTA CAACGTCAAG CAAGGGTGGG CACCGCTGAT TCCATTTTTG
GGTCTGGACG ACAGTCTAAT GGAAGTAGAC TTTCCCAATG TCAATGATCG GAAGAGTATT
CAGGTTGTTC GAAATGCCAT GGATATCATT GGAGCAGGCC TGCCTCTATG GATTTTGGCC
ATTCTTTTTA TGGCATACCG AACTCTTGGT CTTGTTGGTT TCAGCAAACG AACCAAAGCT
AAGACAACAT AA
|
|---|
| Protein sequence | MISTPRLTLY AMLTISLAFW LIPGKPSLGF AFADAEPALA TNLHRRLPTD DSTTRLGEAF
RFVTDFVFTR HSLAFTGEQQ GLRVIGAGFP RTGTKSQEAA LHSLGHRIYD LRSILENRHA
QRWVDAAKAW KQRGDLQPSH KLLQEMEHAG YTATLDFPMN LFALAFAELR PQAKVIFSVR
DNEEKWVESW AYITKVLGHF TTRPWSWIIP RFDFAAELLL ILQDFTWWAG EHQSNVDRPL
PWFEILRTNP MLDSPEGRQE WIELHRRFQR ELEESLPPDR LLVYNVKQGW APLIPFLGLD
DSLMEVDFPN VNDRKSIQVV RNAMDIIGAG LPLWILAILF MAYRTLGLVG FSKRTKAKTT
|
|---|
| |