Gene PHATRDRAFT_43349 details

Gene Information

• Locus tag: PHATRDRAFT_43349
• ID: 7197100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 190354
• End bp: 192372
• Gene Length: 2019 bp
• Protein Length: 651 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002177576
• Protein GI: 219111649

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTACAA ACGATAATGA CACCAACAGT AAGAATGGGC AATCACAACT AACGATTCCA 
TCGGCGGACG TCGTACGGCT CGTGCAAGCC TTCTTGACGG AATCCGGTTT GCACGAATCC 
TGCCGCGTCC TGCAGCACGA ATCGGGTGTC GGGCAAGCGG GGATGACCGA GACGGCGAGT 
TACCATTCCC GTACATCGAC TGACTACCAA CACAGTCCGT GGTACGCGTG GGCCACCTCG 
GGACAATGGG GCACCGTGTT GTCACGGTTG CGTTGGATCG ATGCGTCCCG GGCCCGTTTG 
GACGAAGGCC TCCGGGCCGC CGTGCACCAA ATGGCCGTCC TCGAACTCGC CGATCAGGGT 
GAGTACGAAC TCGCGTACGC TGCGTACCGG CTTGTCCAAC CGTTGCTGGC AGGGAGTCAC 
GCCACGGATC AGGATCTCGG ACCGGACGCG GCGGCGCCGG AAAGTATCCC CGTGACGCGC 
GCCAGTCTCG TCGAACAGTT GTTGGCACAA TTAGCCGCCC TGCGAGCCAA GTCCAACGCT 
TCGCCCAAGG CACTACCGGA CGATTACTAC GGATACCGTC AGACTACGCC ACAGGCACGC 
CGAGAATTTC TCGGACAGGC TCTAACGGAC GCCGTGCCAA TCCAACCGAA AGATCGTCTC 
GTATCGCTGC TCCAACAGGC CTTGAAATGG CAAATTTACA CGGGAGAACT GCCTAAAATT 
CAACAACACT GGCCTGCGAA TGATAGCAAA ACAAAAGGGA AAAAACGCAA ACGTGTCTTT 
GATCTCGTGT TGGGCACGTC CCACGTGGAT CCCGTAGTTG TCGGGGAAAC GAACGACTCA 
TCTTTGTTGC CGCTACAGGA ACCTACCATT GAGCAACCCT ACGCAACCGT CAAACTCGGC 
AAACACGTTA CGGCGACCGC TGCCGTATTT TTGCCACCCA CCTCCGACGG ATCCGGTTCC 
TGTTCTCTCG TCACGGGGTC GTCGGACGGG TTGATTGAAA TATGGGACCC CGTCAGCAAG 
TACTCCGCCC TCCGGACGAA TGATTTGCCG TACCAAGCAA AGGATGAACT ACTCGGAATG 
GACGCATCTA TTAGTGCCTT GGCCGTTTCG AACGACGGAA CGCTCCTGGC GGGTGCAGAC 
TTGCAAGGGA CCGTGCAAGT CTGGCGTGTG GATACGGGCA AGTGTTTGCG CTCCATGCTA 
GCCCATTCCA CTTCCATCTC GGCTCTCGCC TTTTCACCCG ACGCTTCTCA CGTTCTCACC 
GCGAGTCGCG ACGGTACGGC TCGAGAATTC GGTCTGCGAA CGTCCCGTAT GCTCAAAGAA 
TTCCAAGGGC ATGCATCGTA CGTCAATATC TGTGGATACG TCGTGAGCGT TACGCACTTG 
TTGGTAGTAA CGGGTTCGGC CGACGGTACG GTACGGATTT TTGACGGCAA GACTTCGGAA 
ACGTTGCGCA TACTCAAACC TAAATCTCTC GGTCTACGGG TTTCGGAAGT GAACACTTCT 
CTGCTGGCCG ATGAGCAATC GGACGATTCC GCGGCCTCGC CCAGTATCCA AACCGTGCTC 
TTCTTGCACA CGCCAGCACA CACCATGGTG GTTGTGCCCC GGGGGCGGCG GGCCTTTCTG 
GTCGCCATCT CCTCTGGGAT CGTACTGCGT ACGTTCGAAG GGGAGGGAGC CTCGGACGGC 
ACGAACGTTT TCGTAGCGGC TTGCGCGAGT GTTTCGAATC GGGTTCTGTA TATTGTCCAG 
GAAGACGGCA GCTGTTGCGT CTTTGACACC ACCACCGGCG AGCGGATACG CACCGTCGCC 
GACTTTGCCA GCCAGTCGGC GTACGCCTCC AAAGACCCGA AGAGTACGGC CATTTTGGAA 
ATCTCGGCGC TCGTGCACCA CCCTATCAAG CCACTGGTCG GTGCGTACTG CTCGGACAAG 
ATACAGAAAA AGGGACAATT AGTGTTATGG AAGTAGTTCT GGAACGCGGA CATTTTTGGT 
TACGCCGTGT ACATAACGGT GGAAGCAAAC AGAGCAAAG 

 

Protein sequence

MPTNDNDTNS KNGQSQLTIP SADVVRLVQA FLTESGLHES CRVLQHESGV GQAGMTETAS 
YHSRTSTDYQ HSPWYAWATS GQWGTVLSRL RWIDASRARL DEGLRAAVHQ MAVLELADQG 
EYELAYAAYR LVQPLLAGSH ATDQDLGPDA AAPESIPVTR ASLVEQLLAQ LAALRAKSNA 
SPKALPDDYY GYRQTTPQAR REFLGQALTD AVPIQPKDRL VSLLQQALKW QIYTGELPKI 
QQHWPANDSK TKGKKRKRVF DLVLGTSHVD PVVVGETNDS SLLPLQEPTI EQPYATVKLG 
KHVTATAAVF LPPTSDGSGS CSLVTGSSDG LIEIWDPVSK YSALRTNDLP YQAKDELLGM 
DASISALAVS NDGTLLAGAD LQGTVQVWRV DTGKCLRSML AHSTSISALA FSPDASHVLT 
ASRDGTAREF GLRTSRMLKE FQGHASYVNI CGYVVSVTHL LVVTGSADGT VRIFDGKTSE 
TLRILKPKSL GLRVSEVNTS LLADEQSDDS AASPSIQTVL FLHTPAHTMV VVPRGRRAFL 
VAISSGIVLR TFEGEGASDG TNVFVAACAS VSNRVLYIVQ EDGSCCVFDT TTGERIRTVA 
DFASQSAYAS KDPKSTAILE ISALVHHPIK PLVGAYCSDK IQKKGQLVLW K