| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43342 |
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| Symbol | |
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| ID | 7197395 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 165004 |
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| End bp | 166427 |
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| Gene Length | 1424 bp |
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| Protein Length | 450 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177877 |
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| Protein GI | 219112251 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.564704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAGTCAGCCT TTACGGAATA CGCTAACATG TCAAGCTTTA AGAGGCAAAT ATCACTGTGC
CACTTTCTGC TGATTACGCT TTTGGGTTCC GAATCTGCAG CCGAAGCCTT TGCAACCAAG
GCGCAGCTTG TTCCGTCGAC GAGGGCACGG AACGCGCGAC ACCACGCCAC GGTTCCAGTG
CTACTACGGT CGATCCGAGA GGACTCGGCA GAAATAACCA AGCAGCCAGG ATCCTCTGAT
AGCGGTAGGA TTGGTTTTGA AGATTCCGCC GTCTCCAGGT ACCTACAGTC CAAGTTGGCC
GTCACGGACG AAACAGTCGG TCTTTTGGTA TTGCTCACCG TTCCCGTCGT TTGGGGCACG
TACGTTCCCG TGGTAAGGTT TCTGTACGAA ATCGATCCAC CTATTCCAGG ATTTGTCTTT
TCAGTTTGCT ACTTTGCCTT GGCCTCGCTC ACCACGCTTT CTATGCTAGC GTTTGGTAAC
ACCAATGAAT TGTTTCGTTC GCAGCCAACA AATTCCGAAC CCATTGGATC TTTGGGAAGA
GAAGAGGATT ACCCAGAAAC GAGTGCCGTA TTCGACATGC CTATCCTTGG TGGTCTAGAG
CTTGGTGGTT ACTTGTTTCT CGGCAACTGC TTGCAAGTAG TAGGCCTCAA GACCGTTTCG
GCTGATACTG CAGGATTTTT AGTCCAGTTG ACCACCATTT TGGTGCCGCT ATTTTCGGCC
ATTACCGCCG GCAATTTGTT TTCGGTCAGT GCGCGTACGT GGATCGCGTG TTTGATTGCA
CTGGGAGGAA TCACAATCAT GGGAATAGAT TTGCCGGAAC GGGTCGATTC GCTGACGTCG
TTACTGGCGT CGTTTTCAAC CCCAACGGTA GTCCCGAGTC TCGCGCAGGG AGAGTATCTC
ATTTTGGCGG CCGCAGTATC GTATACCATG CATGTTGTCC GATTGGGGCA GTACGCCAGG
TATACGACAC CGCTCAAACT GGCCGCTGCC AAAGCTACCG TGGAAACGGT TCTAAGTGGA
TTGCTCGTCC TCGTGTTGGT GTTGGTTGCA GGGGACGGCT CGTCGACTGC TACCGGCGTA
TTGGGCTACG CTCAAGGCGC CGGACGCGAA ATCACCGCAT TTTTTGCGGA TGTGCAAGAA
CGGATGGCAG AGGGGACTCT GGCAACCTCC TCGATTCAAA AAGCGGTAGG TGCTACCATG
TGGGCTGGTT GGGTTTCTAC AGCCTACGTT GTCTACGCGC AGTCGTTCGG ACAGCAGCGC
GTCGGAGCAT CCAATGCCAA TCTGATTTAT TCCCTACAAC CCATCTTTAC TGCGCTGTTT
GCGTACGTAT TGCTGGGGGA ATCTATGGAT CCCATGGGCT TTGTAGGAGG AGGATTGATC
CTCTTGGCGG TCTTGCTGGT TGCCTCGGGC CCTTTGACGA ATGA
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| Protein sequence | MSSFKRQISL CHFLLITLLG SESAAEAFAT KAQLVPSTRA RNARHHATVP VLLRSIREDS
AEITKQPGSS DSGRIGFEDS AVSRYLQSKL AVTDETVGLL VLLTVPVVWG TYVPVVRFLY
EIDPPIPGFV FSVCYFALAS LTTLSMLAFG NTNELFRSQP TNSEPIGSLG REEDYPETSA
VFDMPILGGL ELGGYLFLGN CLQVVGLKTV SADTAGFLVQ LTTILVPLFS AITAGNLFSV
SARTWIACLI ALGGITIMGI DLPERVDSLT SLLASFSTPT VVPSLAQGEY LILAAAVSYT
MHVVRLGQYA RYTTPLKLAA AKATVETVLS GLLVLVLVLV AGDGSSTATG VLGYAQGAGR
EITAFFADVQ ERMAEGTLAT SSIQKAVGAT MWAGWVSTAY VVYAQSFGQQ RVGASNANLI
YSLQPIFTAL FARRIDPLGG LAGCLGPFDE
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