| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43299 |
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| Symbol | |
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| ID | 7197073 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | + |
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| Start bp | 53807 |
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| End bp | 58770 |
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| Gene Length | 4964 bp |
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| Protein Length | 1416 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177546 |
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| Protein GI | 219111589 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.545075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCACAA AAACGTTGAA GCATTTGACC AACGCGACTT GTAAATACAG TCCACAATAC
TTCTGCGGAG AGGCTTGCGA CTGCCGGGAC AGAGAACGCT ATCACGGTAG TCCTCCCCAC
GAGTTTCGCA TTGACAGGAT GACGCAGACG CAGGGGCATT CTCCAAATGA AAATCAGAGA
GAAGCAGAAT CCATGGGGCG ACACGGAGAC CAGTCATTTC AAGCCACAAA AAGTACCGAT
GGGCAACAGA AAACACATCC TGACGAGGTC AACAGCCAAA CCATACATTC TTCAAATGTC
GCCGACAAAA GCAAAAGTCC ATTTTTGCCT CCCATACACA CAGCCAAACC GTGGCCAGAA
GACCGGCTAA CAGGAGATCA CGATCTACAG CGCTGCCTTG GAAGCTTCCC CTCTTCCCTA
TGGAAGACGT TCCAGCGGTG GACTTACGCC TACATGCAAC CAATCTTGCT CAAAGGCCAA
AGACAGTTTC GAGAGAAAGA TCACCTCACA GTGGAAGATG TGTATGTAAT TCCAGCCGAT
ATGCAAGCAA GCGTTTTAGT CGAGCAATTT TGGTGAGTAG AGTTTTGTCA AACAAAGGCT
CTCCGACCGC ATGTTCCCCT TTCTTACTAA TATGAGACTC ACCGCTTCCA TATACAGGGA
CGACTATCAC AGAACTAAAA AGCTTGTACC GGTTCTGTTC CGATTGATCC AGCCAATCTT
TGTCCCTGCC GGATTTTGGG AGCTCTTGGT CGTCTTGGCC AAAGTGTCTT TACCTTTGTC
TCTCCGCCAA ATCCTGCTGG TGCTCGAAGC CAACCCGAGT GCCTCGGTCA TTTCCGAAGG
CCTGCCTTTT GCTATCACCC TTTCCTTAGC TGGCGTGGTG TTGGCTTTGT CACAGAACCG
TGTCGTCTTT TTGTGTACAG CCAGCGGAAT ACGAATTCGT GCGGCTCTTA CAACGGCTCT
TTACGAGCAT GCTTTACGAC TTACTGCATC CGGCAAGATC GGGCTGACGA CTGGGCAAGT
CACAAACTTG GTTGCGGTCG ATACGCAGAA GCTTTTTGAT GTATGCGTGG AAGGACACAA
TTTGTGGAGT TGTCCGTTAC TGATTATTAT AGTGCTTGCG CTATTGGCGA CCCTGATTGG
CACCGAATTG ATGATAGGAG TGCTGGTTTT GATTCTCTTC ATTCCGATTG TCCGATGGAT
TGTCCAGCAG ATGTTGAAAA TTCGGAAAGC GCGATCGGCC CTCACTGATG TACGAATCAA
TACACTGACA GCCATGTTGC ATGGCATTCA CGTCACCAAA CTCAACCACT ACGAGCGAAA
CATTGAATCT CAGGTGGAAA CAATCCGTAG GCAAGAAATG GTGTTGCTCC GAAAAGAGCT
GTGGATGTGG GGCTGGGTAC TGACGACGGC AGTGTGTTCT CCGCTAGTGG CGGTCATGGT
TGCCTTTTCC TTCTATACCT TACTGGACGA AGGCAATCTG CTGACGCCGT CTACCGCATT
TTCTACCCTC CTATTGTTTT CCATTTTGCG TTCTCCTATC AACATGGCGG CTCGTCTTGT
CGGAAATATG TCACAAGCGG TAGAAAACGT TTCTCGGATA ACTCTTTTTT TAGAGCGCGA
GGCACACCTT GCTGTAGATG AGGAAGCCTC GAATGAACCG GTCAAAACCT TGGTCAAGAC
TAGCAAACGT GCTTTCCCAA AAAGGCAGCT TGTTCGTTTT TCTGCCTCAA GAGACAATTT
GGTGTCTATA GAGGCGGGAT GCTTTTCGAT CAAGCCGCAA AACAGTATTA TTCAAGGTTC
CTTTCTCGCT TCGTTTCGCG GTCTCACACC AGAAAGAAGT CTCGGAAAGG GTGACTTTAC
AGCAGGGGTG AAAGGATTTT CCGTGAGCAA CTTGTCGTTC GAAGTCAAAC GGTCTGAGGT
GATTGCAGTA GTTGGGAAGG TGGGATCGGG GAAGTCGCTT TTGCTACGAG CGTTGCTTGG
TGAAGTTCCA ACGTTCTTTG GAGACAGAAT CTTCGTTTCG GGGCGCTCAT CGTATGCAGC
ACAGCAAGCT TTTATACTGA ATGCTAGCTT GCGAGAAAAC ATCCTCTTTG GAAAAGACTA
CAATGAACAG CTATACAAAA GAGTCCTTAA GGCTTGCTGC TTAACGGCTG ACATTCAATG
GCTTGGCCCC GCGGGGGATT TGACGCAAAT TGGCGAGCGT GGTGTGACCT TGTCGGGTGG
GCAAAAGCAG CGCGTTGCTT TAGCTCGAGC AGTGTACACC GATCCTGATC TCGCTTTCTT
GGATGATTGC TTTTCGGCGT TAGATCCTAG CACAGCAAAT GCTGTTTACG AGGGCCTCTT
TGGATTGACG CAGGGAGAAG GCCGCAATGG TATTCTTCGA TCAGCTGGAA CTATTCTTGT
AACTCATTCG ATTCAATTTC TTTCCCGAGT GGACAAGATC CTTGTCCTGA GCGATGGAGC
TCCTTCATTC TTCGGGACAT GGGCAGAATT GCAGTTATTT CAGGGCTCCA AGGGCAATTT
GATTGAGTCT ATTCAACAGA ACTGTCAAGA AGTAGAGAAG AAGAGTAGGA GTGGGGAGCT
AGAAGAGGGT CAAACAGCCA ATGAAGGTGG ATTGATAATG ACTGTTGAAG AGCGCAAGTA
TGGAGGAGCT AGTTTTTCTG TCTGGACCCG ATGGTTTAGT AGTGCAGGAG GATGGTCATT
CTTCTTGTCG CAAATGATTT TGTCAATAGT TGAGAATGGG CTTTTTGTCT CATCAGATTG
GTAAGGACGC TGACTCACTA ATGAGTAAAG ATTAATGCAC CAAATGCCTA ATCGGTATAC
TTTGTCGATT ATTAACAGGT GGTGTGCTAA ATGGTCTGAT TCAACTTTCA CCGGAACAGA
TCTTTTCGGA ATGTCCTTTC CGCCGCAGAC GGAAGGGAGG TCTGTTCAAG TGCAGTATGC
CGTTGTGCAT CTTTTAATTG TCGTTCTTTC CGTCTTTGCC ACCTCGATAC AGTTGCAGTT
TGCAGGTATG TCCAAGCTTT GTTTTCCGCA ACAAGTTGCT CATGTTACTT ATAAGGTGTG
TGGACCTCAC TATCAACTTT GCCAGTTGCT GGAGGCGCTA AATGTGCGGA GCGAATGTTT
TTGGACATGA CCACTCGGGT TCTGCGCGCT CCCTCGTCGT ATTTTGAAAC CACACCGTTG
GGTAGAGTGC TTAACCGTTT CACATACGAT GTTGAGGTTT TGGATGTTGA GCTATCCATT
TCCATGGCTG GCTTGATGAT ATCATCAAGT CTGCTGATCT CTTCCATTGT TGTTATGGTA
CGTCCGAGCA TTGCGTATCG AGTAAACACT TTTGTAGACA AAAATCTCAC GCTACGGTTT
GACATCGACT GCCATAAAAA AGCTTGCTAT TTTGCCGTGG ATTGCCCTCT ATATTGTGCC
TGTCGGAGTC GCATACACTT GCATTCAGCT TTATTATCGC AGGAGTGGCC CAGACCTGCA
AAGGATTGAC GCAACATCTC GGAGCCCGAT TCAAGCAAAG CTCGCAGAAG GTATGTTTTT
GAAGCGGCTC GCTTCCACCT TGGAAATAAA GAAACGTTGA ACAAGTGTTT GACTCAGCTT
GCTCTTGGAA TACATAGGTA TGGATGGTGC GACGACTATT CGAGCTTTTC ACCAAGAGAA
ACCGTTCATT GTTGGTTTCC AAAGGAACGT CGACTTCAAC AGCTCTGCCA TGCTAAACTT
TGCAGCTGCC CAGCGCTGGT TGGCCTTCAG GATGGAAATT CTTGGTGCCA CTGTTGGTTT
TGTCTTCAGC ACAATTGTTA TTTGCACAAA TGATCGCTTG AAAATCGATT CCGGAATGGT
TGGTTTGGCC CTGCAATGGG CGACCATATT CTCAGCAGCA CTCAATTTTT TCTTTTTGAG
ATTAACGGAG GCCGAGGCGA AAATTACTTC AATTGAACGT GTTCACCAAA CAACACTTCT
TCCACAGGAA GCATCCTGGG AAACAGATCC ATTGATGAAT CTTGACAAAA ATTGGCCCAA
GACTGGGATT TTGCAGTTTG ATAGTGTGTG TATGCGCTAT CGCTCTGACC TGCCCCTGGC
CCTAAAAAAT GTTTCCTTTC AGTTAGCGCA CGGAATGCGA TGCGGCATTG TAGGCCGGAC
AGGCTCTGGC AAGACGTCGC TAACGGCAAG TCTCTTTCGA TTGGTCGAAA TCGAGGCAGG
TCAAATTGTT CTTGACGGAA TAGACCTTTC GAAGGTGGGC CTGGCGGATG TTCGCGGTCG
TCGAAACGGA ATGCAGATCA TTCCCCAGGA TCCGGTTCTG TTTGCGGGAA TTTTACGGGA
GTGTCTTGAT CCTTTCTTTC TCGAAAGCGA CGAAAAGGTG CTGCAGGCTC TTCAGGCAGT
AAACCACAAG GGAGTCAATG AACGTGGCAA AGCTGTTCTG AATGATCCGG TGGACGAGGG
GGGAAGCAAC TACAGTGTTG GTGAGCGGCA GCTGCTGTGC CTGGCTCGCG CTATTGTGCA
AGAGCCTCGT GTACTGGTCC TGGACGAAGC GACTGCCAGC GTCGATGCGG CTACCGATGC
CTTCATTCAA GACATGCTCC GCACTCGCTT CAAAAATACG ACGTTGTTGA CAATAGCTCA
CCGTCTGAAC ACCATTATGG ATTACGACAT GGTAATTGTA CTGGACGACG GTCACTGCGT
GGAGACGGGC TCACCGCTTT CCCTCTTGGC TGACCCTGAC GGTTGGTTTA CGGCATTGGT
GGATGCCAGC GGACCGAACA TTGCGGCGGA GCTTCGACGG ATTGCGGCAG AAAAGGAGCC
ATAGGACTGC CGTTGTCACC GTTGGAGGGT AGGAAGAAAT GCCCTGATTG GCGCACACTT
TCCAGGTTGT ACCGATGGTG TGTTTGTTCC CATCTGTTCA CGGGTAACAA CAATAAATAT
AGGCGACTGG TGATTAACTC GCTATAGAAG TCATTATCTT ATTC
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| Protein sequence | MTQTQGHSPN ENQREAESMG RHGDQSFQAT KSTDGQQKTH PDEVNSQTIH SSNVADKSKS
PFLPPIHTAK PWPEDRLTGD HDLQRCLGSF PSSLWKTFQR WTYAYMQPIL LKGQRQFREK
DHLTVEDVYV IPADMQASVL VEQFWDDYHR TKKLVPVLFR LIQPIFVPAG FWELLVVLAK
VSLPLSLRQI LLVLEANPSA SVISEGLPFA ITLSLAGVVL ALSQNRVVFL CTASGIRIRA
ALTTALYEHA LRLTASGKIG LTTGQVTNLV AVDTQKLFDV CVEGHNLWSC PLLIIIVLAL
LATLIGTELM IGVLVLILFI PIVRWIVQQM LKIRKARSAL TDVRINTLTA MLHGIHVTKL
NHYERNIESQ VETIRRQEMV LLRKELWMWG WVLTTAVCSP LVAVMVAFSF YTLLDEGNLL
TPSTAFSTLL LFSILRSPIN MAARLVGNMS QAVENVSRIT LFLEREAHLA VDEEASNEPV
KTLVKTSKRA FPKRQLVRFS ASRDNLVSIE AGCFSIKPQN SIIQGSFLAS FRGLTPERSL
GKGDFTAGVK GFSVSNLSFE VKRSEVIAVV GKVGSGKSLL LRALLGEVPT FFGDRIFVSG
RSSYAAQQAF ILNASLRENI LFGKDYNEQL YKRVLKACCL TADIQWLGPA GDLTQIGERG
VTLSGGQKQR VALARAVYTD PDLAFLDDCF SALDPSTANA VYEGLFGLTQ GEGRNGILRS
AGTILVTHSI QFLSRVDKIL VLSDGAPSFF GTWAELQLFQ GSKGNLIESI QQNCQEVEKK
SRSGELEEGQ TANEGGLIMT VEERKYGGAS FSVWTRWFSS AGGWSFFLSQ MILSIVENGL
FVSSDWWCAK WSDSTFTGTD LFGMSFPPQT EGRSVQVQYA VVHLLIVVLS VFATSIQLQF
AVAGGAKCAE RMFLDMTTRV LRAPSSYFET TPLGRVLNRF TYDVEVLDVE LSISMAGLMI
SSSLLISSIV VMLAILPWIA LYIVPVGVAY TCIQLYYRRS GPDLQRIDAT SRSPIQAKLA
EGMDGATTIR AFHQEKPFIV GFQRNVDFNS SAMLNFAAAQ RWLAFRMEIL GATVGFVFST
IVICTNDRLK IDSGMVGLAL QWATIFSAAL NFFFLRLTEA EAKITSIERV HQTTLLPQEA
SWETDPLMNL DKNWPKTGIL QFDSVCMRYR SDLPLALKNV SFQLAHGMRC GIVGRTGSGK
TSLTASLFRL VEIEAGQIVL DGIDLSKVGL ADVRGRRNGM QIIPQDPVLF AGILRECLDP
FFLESDEKVL QALQAVNHKG VNERGKAVLN DPVDEGGSNY SVGERQLLCL ARAIVQEPRV
LVLDEATASV DAATDAFIQD MLRTRFKNTT LLTIAHRLNT IMDYDMVIVL DDGHCVETGS
PLSLLADPDG WFTALVDASG PNIAAELRRI AAEKEP
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