| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43280 |
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| Symbol | |
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| ID | 7197058 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 10452 |
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| End bp | 12255 |
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| Gene Length | 1804 bp |
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| Protein Length | 528 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177843 |
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| Protein GI | 219112183 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0677337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTTATTGTGC TCACAGTCAC CGTCAATTGC TATTTAACTA CGCAAGGATC AACACAAAGT
CTTCCTTACT CGTCACATTC AGCTTCATTC AAAATAGAAA ATGATTCATT CCAAAAGCAA
GCTCTTCTTC GGGCTTGCAA TCCTGTTATC ATGTTTGCGT CCATCCATAG CGGACGGATC
AATTTCATTG TTTTCAACCA CAGCGGCACG ACCGACGTAT ACTGTGAGCT CTGTGACTGC
TATCCGAGGT GGTGCCGCTG CGATCCCCGC TCCAAAGGGG AAGCGAGTTC TAACGAAGAA
GCACGTCGCG ACTTCGGTAG GGCACGACGA TGAGCTCATG TCATCACCAA CGGCAGTGGC
CAACGTTTTG GCCGATTTGT GCCCGCACGG GATGCTTCCA ATAGGTAGGA CTTACAATAC
GGAGCTTACA TTCTGACACA AGCGAGCGTG TACTCATATC ACTCATCTCA TTTTTTCCCT
GTTTGAATCA TAAAGCCTAC GGAATGGCGG CGGCAGGCGG CACAGGTCCG GTCCTCGCAA
CTGCGGTCCT TGTTGTTTTT GGTGCCTTGA GTTGGTATTC ACTTGTGTCC TTCGCGCGGG
CAGCCGATGT TGTATTGGTG CAGTCTAAGG AAGAGCATGC CGCCGGGGAA TCTTTGTCTG
CGGTGTGGGA ACGAACTGTA CCAAATGGGA AACTCACCAC ATACATACCA GATGTTGGAT
GCGTATTCTT GACCGTGGGA TGTTTACTTT TCTACTCTGC GTTTATCGGC GACATCTTTG
GGTCACTCGT TTCTGGTGTG AAGGGCCTTC CATCGGTGCT ACAAAAACGC TGGCCCGTGC
TACTCCTGCT CCACGCAGTT CCCATTTTAC CACTATGCTT GAAGAAAGAC CTTTCGGCTC
TCAAGTACAG CTCCATGACA GGCTTGCTTG GCATATTTTA CACAGTTTTC TTTGTGGGGA
AAAGACTGGT TGATGGATCC TACGCTGAAG GTGGAAAGTA TTTTGATCTC ATGGCAACCA
AGTTTCAACC GGCACCTCTA GCCAACTTTC CACACACACA ATCTGGGGTA CTAGGGTATC
TGGCGGACAT TCCTTCCATG TACGCCGGCA AAGGCCTTTT TACTTTGATG AACATGTGCT
GTGTTGCCTA CGCATGTCAC TATAACGCGG TCAAATACTA CATGGAGCTC AAAGATCGTA
CGGTTCCGAC TCTTAAAGGA GTCATGGCGG CAGGCATTGG CGGAACTGGT TTAGTTTTTT
GGTGTATGAT GATGCTTGGA TTTGCCACTT TCGGAAAGCA TTCTCAGGCA TTGCTTCTCA
ACAATTATCA TAGCTCGGTG GATCTTATGG CAACGGCGGC TCGTCTCTTT ACCGGGATTG
CCATTATTTC TGGATACGCG CTAATGTTCG CTGGCCTCAA GGCAGCATTG TTTTCGCTAC
TCAAACTGGA CCAGCCAAAC ACCACGAACC GTGATTTGAA GCAGAACACC ATCTCCTTTG
GTATTCTGTC GGCAATTGCG GTTGCCGCAT GCTTTGTTAC GGAACACGAA CTCGCCACCG
TAATCGGGAT TGTGGGAAGC GTATTTGGAT CCGTTGTTAT CTACATCTTC CCTGCTATTG
TAAATATCAG CTTGCTCGCC AAGAAAAACA AGAAAGGCAA CCGAATTGCA GCATTGTTTT
TCCCTGGCGA AGTCCTTTTT AACAAGCTCA TGATCTTATT TGGGGCAATG TTTGCCGTAC
TCGGAACGTG GATTTCGTTA GCAAGCGACG ATCATTAGCT GTAAACAGAC AAGTTACCCG
TTTC
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| Protein sequence | MIHSKSKLFF GLAILLSCLR PSIADGSISL FSTTAARPTY TVSSVTAIRG GAAAIPAPKG
KRVLTKKHVA TSVGHDDELM SSPTAVANVL ADLCPHGMLP IAYGMAAAGG TGPVLATAVL
VVFGALSWYS LVSFARAADV VLVQSKEEHA AGESLSAVWE RTVPNGKLTT YIPDVGCVFL
TVGCLLFYSA FIGDIFGSLV SGVKGLPSVL QKRWPVLLLL HAVPILPLCL KKDLSALKYS
SMTGLLGIFY TVFFVGKRLV DGSYAEGGKY FDLMATKFQP APLANFPHTQ SGVLGYLADI
PSMYAGKGLF TLMNMCCVAY ACHYNAVKYY MELKDRTVPT LKGVMAAGIG GTGLVFWCMM
MLGFATFGKH SQALLLNNYH SSVDLMATAA RLFTGIAIIS GYALMFAGLK AALFSLLKLD
QPNTTNRDLK QNTISFGILS AIAVAACFVT EHELATVIGI VGSVFGSVVI YIFPAIVNIS
LLAKKNKKGN RIAALFFPGE VLFNKLMILF GAMFAVLGTW ISLASDDH
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