| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_3940 |
|---|
| Symbol | |
|---|
| ID | 7197113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 259687 |
|---|
| End bp | 260574 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177896 |
|---|
| Protein GI | 219112289 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAATATTTCA CCTACTCCTA CGCCCTTGTT TTCACGAATC GTTTCTGGAC TCTCATCATG
TCGGGTATTC TTCTCATATA CCTCAAGCCT CGCCGCAGCA AGTCGACGGT AATCTACGAA
TATTCGTTTC CCTCAATATC CAACATGCTC AGTAGTTGGT GTCAGTACGA AGCTTTGCGT
TACGTGTCCT TTCCCGCCAC AACCTTGTTC AAGTCTTTCA AGCTGGCGCC CGTCATGGCT
ATGGGGAAGA TTCTCGGTAA CAAATCCTGT ACGTGGAGTT GTTGTTTATA AATTTCAACA
TTGTTCCGAC TGCCTCAGAT TCTCATGCCG TTCTTCAAAA ATCGTTACGC AGATCCCCAG
TACGACTACA TTGTGGCGCT AATGATCGGA GTCGGTATTA CCATGTTTAT GACATCAACC
GATGATTTAG GTTTTGGATA CGATGTTTAT GGGGCGGAAG TTTCGACGAC CTGGACTGGT
ATCATGCTGC TCTTCTTGTT TCTATTTTTT GACAGCTTTA CAAGTCAGTT CCAAAGTAGA
ATGTTTCAAC GACACCGTGA TCTTTCCATG GTGGAGCTTA TGTTTGCCAT GTCAGCCATT
TCGACGGTAC TTTCATTCGT AACCCTGATT CACAGCAAGG AGCTCGCCCC AGCGCTGAGT
TTTGTCATGC AACACTCCGA AATTCACTTG CACTTTCTAC TCTTTTCGTT ATGTTCCACC
ATTGGCCAGC TGTTCATTTT TTACACAATA AAGAATTTTG GCGCTGTGGT TTTTACTCTC
ATCATGACCA CTCGAATTCT CTTGAGTATT GCATTATCTT GCATCTTGTA CGGACATAAA
GTTTCGGCGT CAGGTTTTTT TGGTCTTATG CTCGTTATGG CAGCAGTT
|
|---|
| Protein sequence | EYFTYSYALV FTNRFWTLIM SGILLIYLKP RRSKSTVIYE YSFPSISNML SSWCQYEALR
YVSFPATTLF KSFKLAPVMA MGKILGNKSY PQYDYIVALM IGVGITMFMT STDDLGFGYD
VYGAEVSTTW TGIMLLFLFL FFDSFTSQFQ SRMFQRHRDL SMVELMFAMS AISTVLSFVT
LIHSKELAPA LSFVMQHSEI HLHFLLFSLC STIGQLFIFY TIKNFGAVVF TLIMTTRILL
SIALSCILYG HKVSASGFFG LMLVMAAV
|
|---|
| |