Gene PHATRDRAFT_32992 details

Gene Information

• Locus tag: PHATRDRAFT_32992
• ID: 7197248
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: -
• Start bp: 1272016
• End bp: 1274158
• Gene Length: 2143 bp
• Protein Length: 633 aa
• GC content: 48%
• Product: metacaspase
• Protein accession: XP_002178108
• Protein GI: 219112713

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.696617
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAATG CCGATTCGAA AGCGACGACT AGCCTTGCCG AAGCAGAAAC GGTCCCGACC 
GGTATCGGAC GCAAAGAAAG TTGCTTGAGA TCGTTTAACG ACAGTTTCGA GGAAACGAAG 
AATACAGCGG CAGATCCTAT TCACCCGATT AGCGGCAGAT CCGATCGCAA GGAAACGGCT 
CAAGCACGGG ATGACGAAAT TTCGTCGCAT ATTACAGACG ACCAGGTTCA CGTAAACTTG 
GCCATGGCCG ACCTAATGGC CTACCTTCAA GTCGTCGCCA ACAATAGCAG TCATTTGCCT 
TTAACGCGTC GCGATGATCC AGATCTGGAT CGAATAGAAG GTAGCCTGGC GTCGGAAGAA 
TACGGCAAGA AAAGTGCCGC ATTTATCCCT TCCGACGTGC GAGTCATTGC CGGTGTCTTT 
ACTCGATACG GCCGGGTTTG GGATTTACCT ACGAGCGAGG TAAGTTGATG GATCTCGGAG 
CCATTTACGA ATTGGGGCTA CCGTAGTTAC AGCAAAATTC TTACCGTCTT CGTGTTGCTG 
TTGCTCTCGC CGGGTAGGAA TACAACGCGG TCGACGGAAA CCACGAACCA GGAAGGTCGT 
ACGGCGGAGC GTGCTGCAAT GCGCTTCTGA AAGTCCTGTA CGATGCTGCG AACGATCATG 
TCGATGCCTT TCATGCAGTA GCTGCTACCT CGGCTTCAAT TTTCGACGAC GACGATGAAG 
AAGAGGATCT CTATGCCGGC ATGGGACAAT CGTACAAGTC CGGCTGTTCA CTAGAGTACA 
CAAACCCATA TTCTGTAACA ATAACATGGT GCGACCTGCT GCGAAGAATG AAGGCTGAAA 
TGAAAGACAT TGAACATGTG CAGGTACCGA AGATATCAAC ATCTCGCAAA ATTGATCTCT 
CCAAGCCGTT TTCACTCATT CCGTCGAACT TCGATCCAAT AAACGGACAG AAACGATCTC 
TTTTGATTGG ATGCAACTAT TCAGATATTC CCGAAGCCCA GTTGAAGGCC AGTCATGATG 
ATGTGCGCTC GATTAAGGTA TTTTTTTCTA GGCAACGTTG TTTGATAGTC CCGGTTTCGG 
CTCTAAACTC TTTTCACTCG TGCACTGCAG GACTACATCG TTAACGTACA TGGCTTCCCC 
GAGGCGTGTG GTCTCATGAC TGTTCTTATG GACGACAAGA ATCACAAAAA GCCAACATTT 
TTGAATATCG TTGAAGCTTT CAAGGCCTTG TCGGAAGAGG CCCAACCCGG CGATGCTATC 
TTTATACAAT TCTCTGGACA TGGTGGCCGC GTCCTCGATT CGCATATAGA CACCGAAGCT 
GAGAGTTACG ACGAAGTTCT TGTTCCTTGT GACTACTTGC AGTCGGGTCT AATTCGTGAT 
ACTTTGATTT TCAAGACGCT GCTGGCGCCG ATGCGATACG GGGTAACGGT GACGATACTT 
ATAGATTGTT GCGACAACGG AATGGTATTG GAGCTACCGT ACTCATGGAG TACGAAAGGA 
GATCGACGGA GTTCGCAACC GAAGGTGCGA AATGAAGTGG ATGACTTAGC TTTGACAATT 
TTGTCAAACT CACCTGTTCA TCCTTTTGTT ACAGCTTGCT TTGAACGAAG ATTTTAGTTT 
CAAGCGGTTT TTGAAGGTTG TCAGAACACT CTATGAATCC TCTAGTTTCA CACAACTAGG 
GAGAACAGTG GATATCGCTC TCAACCCCAT GAATGCAACT TTCAAGTCTA CAACCATCAC 
AAATGACGAG TCATCAGTCC TTTTCGAGCA ACCTGAAAAG GCTGTTAACG CAGCGTCAAG 
ATCTTCGATA CTCGATAATT TTTCACTAGC GTGTAGTACG AAAACACTAT CAACCCCAAG 
AGGTGATGGC GACGGCGGCA TTGTCAACAG CACTGGTCTT TCTGTGATGA AACATTATTC 
ACTTACAAAG CAGTCACTTT TGCAACAAGT TATGAACTGC ACGCTATTGA GTCCAGAGGT 
TGATGAAGAC TTTTCGTTCG ACGAAACCTA CCAGACGCGG ACCGAGGATC ACAATACCTT 
TGACGAGGAA GACCGCAGTG TTGGCTACAA CTCGTCATTT CGCTCATGTG TTACAGAGTA 
CGAGGAGGAA TCACGACGCC GGGGGCGACG TAGGAGGCGG TAA 

 

Protein sequence

MGNADSKATT SLAEAETVPT GIGRKESCLR SFNDSFEETK NTAADPIHPI SGRSDRKETA 
QARDDEISSH ITDDQVHVNL AMADLMAYLQ VVANNSSHLP LTRRDDPDLD RIEGSLASEE 
YGKKSAAFIP SDVRVIAGVF TRYGRVWDLP TSEEYNAVDG NHEPGRSYGG ACCNALLKVL 
YDAANDHVDA FHAVAATSAS IFDDDDEEED LYAGMGQSYK SGCSLEYTNP YSVTITWCDL 
LRRMKAEMKD IEHVQVPKIS TSRKIDLSKP FSLIPSNFDP INGQKRSLLI GCNYSDIPEA 
QLKASHDDVR SIKDYIVNVH GFPEACGLMT VLMDDKNHKK PTFLNIVEAF KALSEEAQPG 
DAIFIQFSGH GGRVLDSHID TEAESYDEVL VPCDYLQSGL IRDTLIFKTL LAPMRYGVTV 
TILIDCCDNG MVLELPYSWS TKGDRRSSQP KLALNEDFSF KRFLKVVRTL YESSSFTQLG 
RTVDIALNPM NATFKSTTIT NDESSVLFEQ PEKAVNAASR SSILDNFSLA CSTKTLSTPR 
GDGDGGIVNS TGLSVMKHYS LTKQSLLQQV MNCTLLSPEV DEDFSFDETY QTRTEDHNTF 
DEEDRSVGYN SSFRSCVTEY EEESRRRGRR RRR