Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_32976 |
Symbol | |
ID | 7197001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 1230599 |
End bp | 1231573 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | |
GC content | 60% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178101 |
Protein GI | 219112699 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.682514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAGCTT CCCAGTCGTC GTCCCCGCCA CCGGACTCGT CGCATCGGAA CACCGAGTCC ACGAACGACG CCGACCCGTC GTCGTCAACA CCGCTGTACC CCACCCCCAC GGGGCACGAA TATGACGCCC TCGACAAAAT CGCGGCCGAA CTCCCCAACG TCATTGACGA CGAATCTCGT CAACAGGTGG AAGACTACAA ACAAGCCTGC GACGACGGCC GGGGACCGCT CGTCGCCTGT TTCGCCACCG GCGAGTACCT TTCGCTCTTT GAACGCCAAC ACCGCGCCGC CGCCGAACTC TACGAGAACG TCTGCTTCCG ACCCAAAAAC GACAAATCCC CCAACGGCGT ACTCATCGAC CACACCATCG CCTACCCCGC CGGATGCTTC AATCTCGCCA AAATGCTCAT GACCGGCAAG GGCGGAGTCC CCGCCGATCG CGCCCGCGCC TACCAACTAT TCGACCGCGC CTGTCGCGGA AAACACGGCG GAGCCTGTTA CTTGCAGGCA CAAATACTCT GCACCCGACC CGACGCACTC GGCGGACCGC ACAGTGGCAT ACCTCACGAT CCCGTCAAGG CCATGGCGCT CTACCAAGAC AACTGCGACG ACGGCGATTC CATTTCCTGC TACACACTCG CCGCCATGCT CCTCCGCGGC GATAAGGTGA ACAAGACAGC CGACAACGTC TCGCCTCAGG AAGCCCGGGG ACTCGCACCA CTCGTGCAGC GGGAACACGA ACCAGATCGC ACCCGGGAAC CGGCACGCGA CGTTCCCTAC GTCGTGCCGA GAAATCCCGC CCGGGCCCGC GATTTACTAC ACCAGGCCTG TACCACCGGA TCGCATGTCA CGTCCTGCCA TAATCTGGCC GTCATGTACA CTCATGGTGA TGACGGTGTT CCGGCCGATG CGGAAAAGGC GGAATATTAC AAACAAAAAA CGCAAGAGAA AATTGATATT TTTGGCGGCT TTTAA
|
Protein sequence | MGASQSSSPP PDSSHRNTES TNDADPSSST PLYPTPTGHE YDALDKIAAE LPNVIDDESR QQVEDYKQAC DDGRGPLVAC FATGEYLSLF ERQHRAAAEL YENVCFRPKN DKSPNGVLID HTIAYPAGCF NLAKMLMTGK GGVPADRARA YQLFDRACRG KHGGACYLQA QILCTRPDAL GGPHSGIPHD PVKAMALYQD NCDDGDSISC YTLAAMLLRG DKVNKTADNV SPQEARGLAP LVQREHEPDR TREPARDVPY VVPRNPARAR DLLHQACTTG SHVTSCHNLA VMYTHGDDGV PADAEKAEYY KQKTQEKIDI FGGF
|
| |