Gene PHATRDRAFT_18404 details

Gene Information

• Locus tag: PHATRDRAFT_18404
• ID: 7197281
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 1422266
• End bp: 1424634
• Gene Length: 2369 bp
• Protein Length: 512 aa
• GC content: 45%
• Product: predicted protein
• Protein accession: XP_002177827
• Protein GI: 219112151

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.346695
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCTCTAGAG ATCTGATTGA TACCATGAGC GACGAATTCT CGAAAAGGTT TTTTGACTAT 
GTTGATGAGA GGAAGAACCT ATACATCGAT CGTCTCGCTG AGGCTGTCGC GTAAGAAAGC 
TATTGAAAAC TGGTCCGACG CTCAAGAGGA ATGCATCGTT CTCATTAGTT GCCATTCTTA 
TTCGTCGCAG GATTCCATCC GTTTCCTCGG ATTTGGAAAA TCATCTGGTC GACATCAACA 
CAATGATCGC TTGGACTAAG GGTCATATAG AGCGCCTCGG TGGATTGACG GAGCTCGTCA 
CCAACCCCGC AGGCACCGAA AATCGCCCTT TGCCTCCAAT TCTGTGCGGT TCTTTCGTTT 
CCAACCCCCA TAAAAAGACT GTTTGTGTGT ATGGTCACTT GGACGTGCAA CCCGCGGCAA 
AAGATGACGG ATGGGATTCA AATCCCTTTA TATTAACTGA GCGCGACGGA AAGTTGTACG 
GCCGCGGAAG CACAGATGAC AAGGGACCTG CATTGTCTTG GTTGTGGGTG GTCGAGGCTC 
ACCGGGAACT GGGTGTCGAG TTGCCAGTCA ATATCAAGAT TCTTTATGAA GGAATGGAAG 
AAAGCGGTAG TGAAGGAATT TTCGAGATCA TTCAGAGAGA ATCTGCCCCC GGAAAATTCT 
TGAATGATGT CGATTTCTTT TGCATTTCGG ACAATGTAAG AAAGTGCTTG ACATATCGTT 
GGCACTAAGA TTGCCGTTGT AGCTTTAACA CAATGTTTGC TGTTTCCAGT ACTGGCTCGG 
GAAAAATAAA CCATGCTTAA CTTACGGATT AAGAGGAATT GCTTATTTCC AGCTGTCTGT 
CCGATGCTGT GAGCAGGATC TTCATTCCGG TGTCTTGGGC GGAACGGTGT ACGAGGCCAT 
GACAGACTTG ATTCAGCTTA TGGCAACACT GGTTGATTCC AGTGGGCGAA TATTGGTGGA 
CGGAATTATG GATGACGTTA AGCCAGTCAC ATCAAAAGAA GAAGCCCTGT ACAATTCAAT 
CGAATTTGAT GTAGAAGAAT ACAAGGAAGA GAATAAGATC AAATCAGTTA GCGACAAATT 
GTTGCACAAC GACAAGAAAA GTCTTTTAAT GGCCCGCTGG CGGTATCCTA CACTATCTTT 
ACATGGAATT GAAGGCGCTT TCTCCGGATC TGGCGCCAAG ACTGTCATTC CGAGTAGGGT 
TATTGGAAAG TTTTCTCTGC GACTCGTACC CGATCAAGAT CCGGAAAAAA TCGCACGGCT 
TGTCAAAACA CACGTAGAGC AAGAATTTGC CAAGGTATGT GCTTTCAAGT ACTGAATTAT 
ATAGTATGTA TGGTTTGTTT TTGTTGCTTT GAAATAGAGC ACTCATCCCA TTCTGCTGCT 
TGTCACAGCT TGGCTCGCCC AACCGGATGG AGCTAGAATA CTTTCACGGT GCAAAAGCAT 
GGCTGTCGTC GCCAAATCAC CCCAACTATC AAGCTGCCGC TGCAGCTATC AAGACCGTTT 
ATGGGATGGA ACCCGACTAT ACTCGGGAGG GTGGATCAAT TCCAATCACA TCAACAATGG 
AGGATTCTAC TGGAATGAAT GTATTGCTTC TCCCGATTGG GGCGTGTGAC GACATGGCAC 
ATTCCCAAAA TGAAAAGTAA GTAGTTTATA CCCATATTCG CATGTTTTGA TTGATTTCTC 
TTACATTTGG TATGATTAAT GAATGCGTCA GATACAACGT CAAAAATCTA ATGAATGGAA 
TTAAGGTGCT GGGCTTGTAC TTGCATGAAT TGGGGAAAAT CAAAGGTCCG AAACCGTCCG 
ATTGCCGTTG CGTACCTTTA ACTCTGGAAG AGCTTTCTAT ACCAGGTGCT TTTATGAAAG 
GATTCCGCTG CAAATGTGAA ATTTGAATGT TACAAAACCT ATACGAAAAG AGGCCAGGGA 
GGCAGGATAC AGCTTGCGTC TACTTCGCAC GCCATTAACT TTATTATCCT CACCTTAGCT 
CGAACATCTA AGTTTTTAAG CCGAGCTCAC CCTTAACACG AAAAAAGAAC ATTGTCGAGT 
TTTTCAGTCG CGGAAAGAGC CACTGGGTAT AGAAGACAGG GGTCTCAAAG ACTCCATCAT 
TTGGGCCAAC CGTAGAAAGC GTGACTTTGG GACTAACTTT CCCTCGCTTC AGCCTAGCGT 
CGGAAGGTGC AGACTCGCAT TTCGCCACAG CTCCGATGGT CTGACTGATG TTGAATCTAA 
TAGTTTTGAT CGCATCCATC ACCTGCGCTC CCGAGTTAGG TAAGAATGTA GAGCAGTCAC 
CAATAGAAAA CAATTTGCCG GCGGTTCCTT TGACTCGAAA GTAGTCGTCT GTCTCAATCC 
ATCCCTCTGC ATTGAGTGCT TCTGGGAAG 

 

Protein sequence

MSDEFSKRFF DYVDERKNLY IDRLAEAVAI PSVSSDLENH LVDINTMIAW TKGHIERLGG 
LTELVTNPAG TENRPLPPIL CGSFVSNPHK KTVCVYGHLD VQPAAKDDGW DSNPFILTER 
DGKLYGRGST DDKGPALSWL WVVEAHRELG VELPVNIKIL YEGMEESGSE GIFEIIQRES 
APGKFLNDVD FFCISDNYWL GKNKPCLTYG LRGIAYFQLS VRCCEQDLHS GVLGGTVYEA 
MTDLIQLMAT LVDSSGRILV DGIMDDVKPV TSKEEALYNS IEFDVEEYKE ENKIKSVSDK 
LLHNDKKSLL MARWRYPTLS LHGIEGAFSG SGAKTVIPSR VIGKFSLRLV PDQDPEKIAR 
LVKTHVEQEF AKLGSPNRME LEYFHGAKAW LSSPNHPNYQ AAAAAIKTVY GMEPDYTREG 
GSIPITSTME DSTGMNVLLL PIGACDDMAH SQNEKYNVKN LMNGIKVLGL YLHELGKIKG 
PKPSDCRCVP LTLEELSIPG AFMKGFRCKC EI