| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_18197 |
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| Symbol | |
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| ID | 7197570 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | + |
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| Start bp | 744347 |
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| End bp | 748677 |
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| Gene Length | 4331 bp |
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| Protein Length | 1168 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177677 |
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| Protein GI | 219111851 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.44305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCGATACTCG GAAGGCTCGT ATTTGGCTGG TTTAGTCCCC TCCTGGTCCG CGGAAACGAG
AAGCAAAGAC TGGATCAGGA AGATCTGAGC CTGATCCCGT TTCCGAAAGA CTGCCAAACT
TCGACAGTGG CGGCCGCTTT TGAAAAAGCC TGGGGGGAGG AATTGAAAAG GGAAGACCCT
AGTCTGTTTC GTGCTCTCCT CGCCTCGTAT GGTACTGAAT TTGCGAGGGC TGGCTTATTT
AAGTTGGTGC ATGACTGCTG CGTCTTTGTT GGACCCCAAG TTCTTCATGC TATGATAATG
TTTTTACGTA ACCCTGACTC TCCACTTTCA TATGGCTTAG GCTTGACGAC GCTCGTCACA
TTGTCACAGC TCACAATGAG CCTGTGCCTC CGACATTATT TTTTCAAGTG CTACACTACG
GGTTTGCGTG TGCGCACAGC CGTTGTCGTG GCCATCTATC ATAAAGCTTT GAAGCTGTCA
GCAAGTGAAC GGCAAACGCG CTCGTCGGGT GAAATTACGA ACCTCATGTC GATTGATGCC
CAGAGACTAC AAGGTGAGTT CTACTAGTTG TTAATTATTT GGCGAAGCCA TTTGGGCTCA
TCACTCAAAA CTTTATCATC CAGACTTGAC AACGTACTTG CACGCAATTT GGTATAGTCC
CTTGCAAATC AGTCTAGCGC TTTTGTTTCT TTGGAAACAG CTTGGCGCTA GTTCTTTAGG
AGGTGTGCTA GTCATTGTGA CAATGATTCC AGTGACGAAA ATTGTGGCTC AGTGGATGGG
ATCTATGCAA AAGTTGTTGA TGCGAGCTAA GGATCAGCGA GTAGACTTGA ACGGAGAGGT
TTTGGCCAGC ATGAAAGTCG TCAAGTTTCA GGCCTGGGAA GAGCCCTTCC AATCTCGGAT
CCTTGCCCTT CGTGAGGTGG AACTTCATCA ACTTCTTCGC TACTACATTG TGTTGTCGCT
TTCTCGAATG CTGTGGACGT TCACGCCGTT GATGGTGGCG CTGGCGACAT TCTCCGCCTA
TGTATGGTCT GGCCATGTTC TTGACGTGGC GTCGGCGTTG ACATCACTAG CTCTTTTTGA
AATTTTGAGG TTTCCTCTAT TTATGCTTCC TCAAATCATT AGCAATATTG TGGAGGCTAC
GGTGGCATTG AAACGCATTC AATCATTCTT GCTTTGTAAA GATCATAAAC CAGTTGAAGC
TGGTAATCTC GACAACATCG GCATCAGAAT GGAAGGAGTT TCAGCGGCGT ATGATTCGAA
GCGTCCGAAG GTGAATCCAC AAGCTGATCC AGTTGCTTTA GACCTGTTGG ATAAACAGTG
GGAGGTCAAG CTACTGAAAT CTCAGCTAAA TGAGGCCGAG CATCTCATAA ACCGCCATAC
GGGCAAGGCG GTTTACGGTT CGAAAAACGA AGGCGATGAG GAAGCTGGGC ATAGCCTTCT
TTGTCTTAAG CGAATTGAAT TTGAATGCAA ACCAGGCGAA CTTGTAGCTG TCATCGGTAG
TGTTGGCTGT GGAAAATCGT CGTTTATAAA CGCACTTTTG GGCGAGGTCA GGGCATTGAC
TGGATCTACT TCCGTTTGTG GAAAGATGGC GTATTTCTCG CAAGTGCCTT TCATTATGAA
TGCCAGCGTG CGGGACAATA TTCTCTTCAG TCATACAGAC GAAGAAGTAG ATGAAGCGAT
GTACCAGAGG TGTTTGAGAT GCTGCGCCCT GAAGCACGAT TTGGATCTTC TCCCTAATGG
CGACCGCACC GAAATTGGAG AGAAGGGAAT TACATTGTCT GGAGGTCAAA AGGCGCGAGT
AGCACTAGCT CGTGTAGTAT ATCATCGGGC TGACCTTTCT TTGATTGATG ATGCTCTGGC
AGCTGTTGAC GCTCATGTTG CAAAGCAGCT TTTCGAAGAG GCCATCGTGA ACGAACTCCT
GTCTTGTGGC GCTGCTGGTA TGGAGAGCCG CAGCGTTATC ATGGTCACAA ATGCTCTGCA
ATATTTATCG CATCCCCGAG TAGACAGAAT TATTGTTTTA CAGGACGGAC ACATTGTAGA
AAGTGGGACT TACAATGAAT TGAAGAACGG AGACTCCGTT TTCGCTGGAT TCCTTGCAGT
ACTACGTGAC ACTGGTACAG ATCTGAGTGG ACATCTTGTA GAGGGTGTTG CTAGCAGCGA
TAGCAACGGC GTTTCTGATG AATCGGGTAA TTTAGTATGC ACCGGACGAG AAGCGGATAT
TGAAGCGGAA CTCCCGGTGA AACTAATGAC CGACGAGTCT CGGCAATCGG GACACGTGAA
GCCGAGTGTC TATCTCTCTT GGATCAAAGC AGCTGGTGGG TTGTTTGCCC CTGTCGCAAT
TCTCTTGGCG TTCGGCTTTG CAGAGGGGAT TTCTGTCCTT TCGAATTGGT GGATTACCTA
CTGGTCCGGA CACGGTAGCT TATCAAGCCA ATCCCGATTT CTTGCCATCT ATGCCCTCAT
CAACGGGACG GCTGCTCTGT TCGGCCTTTT TAGGACTCTG CTTGTCGTCA TTTTTGGTCT
AAAAGTCTCC CGAAAGGTGA GACGCCTGTG GAGACAAGAA TCATGCACCT ACGCTTGCTT
CTCACTGTCT CTTTCGTTCA CAACAGCTTT TTGCCAACCT ACTGTCGGTA ATTCTGCACG
CTCCCATGTC ATTTTTTGAT ACGACGCCTG TTGGGCGTCT TGTGAATCGA TTTAGCAAAG
GTAAGAGAAG CTTGTATTTC GGGCCCTGTC GCTAAGCATC TAGGTGATCT GTTTCCCTCA
TCGTCTTTAC AGATATGTAT ACAATAGATG AGCAGCTAAT GGGCACCCTC CGAACATATC
TCCAGACACT GTTTGGCGTG TTCAGCACAC TGTTGGTGAT ATCATCTGTG ACTCCATTGT
TTCTGTTGTG CTTGGTGCCC ATGCTCATAT TCTATTTGAA AGAGCAATCT TTTTTCACTG
TAAGTCAGTC TGGCCGAAGT TCTAAGACGC CCAGTACAGC CTTTCTGACA TTCTGCTGCG
TAAACGAAGA TTTCTTACAG AGAGCTGAAA AGACTGGACT CGGTGAGCCG GAGTCCAATT
TACGCGTTGC TTGGCGAAAG CGTAGATGGC GTTGCTGTGA TACGGGCCTT TGCTGCCCAA
AAAAGTCTTC TCTGTCGCCT AACCGATATG TTGGATATTC AGCAACATGC GTACTTTCTT
ACTTGCGCAG CGCAGTCCTG GCTCGCTGTT CGTCTTGAGC TGATTGGAAC ACTAATTGTA
ACATTTGCGG CTTTGAGTGC AGTATTGGAG CACACCAGAT CCGGAGCCGA CGGAACCTTT
GCGGGTTTGG CAGGGCTGTC GATCTCGTAT GCGCTATCGG TTACGCAATC GCTGAACTGG
AGCGTTCGAA TGGCAAGTGA TATGGAGGCG AATATGGTGG CTGTTGAACG AGTTGAAGAG
TACTCCAACA TTCAGTCCGA AGGCCTGAGA TCAACTCCTG TTGACGCAAA ACTCCCTCAA
GTGTGGCCTC CGAAAGGGGC GATTGAGTTC ACAGAAGTCA GGCTACGATA TAGACCGGGT
TTGCCTTTTG TTCTAAAGGG CTTAAATTTG ACTATTCCTC CCGGGAGCAA AATAGGAGTT
GTTGGTCGTA CAGGTAAGAG GAATCATAGG AAGTCAACCG TTCTTACATT GACGGTAATC
TTACGATGTT TCTAATCGTG TAAGGGGCGG GGAAATCGAC GCTAATGATA GCTCTGATGC
GCATTGTTGA TGTAACGGAA GGAACCATAA AGATTGATGG TACAGATATA TCGGAGATTG
GATTGGCGAG GCTCAGACGA ACTCTGGCTG TTATTCCTCA GGACCCTGTC CTTTTTAGCG
GATCCGTCAG ATCAAATCTT GATCCGTTCC ATGAATACGA AGACGATGCT TTGTTAGATA
TTCTAGACCG CGTTGGGCTG TACGCACGGT CTAGGACCTC TTCAACTCAG AGTCTCCCAT
CCCTTGGCCA AATCTGTATT CGAACCCTTA CGGATGTCAT AGCTGAAGGG GGCATTAACT
TTTCTGTCGG CCAGCGTCAG TTGCTGGTAA TAGCTCGTGC ACTTTTGCGA GGGGCGAAGA
TTGTTATAAT GGACGAGGCA ACTGCAGCAG TTGATGCTGG AACGGACGCT GCAATCCAGA
AAGTAATTCG GACTGAATTC ACAGAGGCGA CATGCATCAC GGTGGCCCAT AGAATCAACA
CTATTTTGGA TAGCGATTAC ATCCTGGTTA TGTCGGACGG AAAGGCGGAA GAATTCGACA
AACCTGATAT GCTACTAAAA AAAGGAGGAT TGTTTCGTGA TTTAGTAAGA GCTTCTGCTG
ATAATACCTA A
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| Protein sequence | MIMFLRNPDS PLSYGLGLTT LVTLSQLTMS LCLRHYFFKC YTTGLRVRTA VVVAIYHKAL
KLSASERQTR SSGEITNLMS IDAQRLQDLT TYLHAIWYSP LQISLALLFL WKQLGASSLG
GVLVIVTMIP VTKIVAQWMG SMQKLLMRAK DQRVDLNGEV LASMKVVKFQ AWEEPFQSRI
LALREVELHQ LLRYYIVLSL SRMLWTFTPL MVALATFSAY VWSGHVLDVA SALTSLALFE
ILRFPLFMLP QIISNIVEAT VALKRIQSFL LCKDHKPVEA GNLDNIGIRM EGVSAAYDSK
RPKRIEFECK PGELVAVIGS VGCGKSSFIN ALLGEVRALT GSTSVCGKMA YFSQVPFIMN
ASVRDNILFS HTDEEVDEAM YQRCLRCCAL KHDLDLLPNG DRTEIGEKGI TLSGGQKARV
ALARVVYHRA DLSLIDDALA AVDAHVAKQL FEEAIVNELL SCGAAGMESR SVIMVTNALQ
YLSHPRVDRI IVLQDGHIVE SGTYNELKNG DSVFAGFLAV LRDTGTDLSG HLVEGVASSD
SNGVSDESGN LVCTGREADI EAELPVKLMT DESRQSGHVK PSVYLSWIKA AGGLFAPVAI
LLAFGFAEGI SVLSNWWITY WSGHGSLSSQ SRFLAIYALI NGTAALFGLF RTLLVVIFGL
KVSRKLFANL LSVILHAPMS FFDTTPVGRL VNRFSKDMYT IDEQLMGTLR TYLQTLFGVF
STLLVISSVT PLFLLCLVPM LIFYLKEQSF FTISYRELKR LDSVSRSPIY ALLGESVDGV
AVIRAFAAQK SLLCRLTDML DIQQHAYFLT CAAQSWLAVR LELIGTLIVT FAALSAVLEH
TRSGADGTFA GLAGLSISYA LSVTQSLNWS VRMASDMEAN MVAVERVEEY SNIQSEGLRS
TPVDAKLPQV WPPKGAIEFT EVRLRYRPGL PFVLKGLNLT IPPGSKIGVV GRTGAGKSTL
MIALMRIVDV TEGTIKIDGT DISEIGLARL RRTLAVIPQD PVLFSGSVRS NLDPFHEYED
DALLDILDRV GLYARSRTSS TQSLPSLGQI CIRTLTDVIA EGGINFSVGQ RQLLVIARAL
LRGAKIVIMD EATAAVDAGT DAAIQKVIRT EFTEATCITV AHRINTILDS DYILVMSDGK
AEEFDKPDML LKKGGLFRDL VRASADNT
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