Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_9233 |
Symbol | |
ID | 7196160 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 1139400 |
End bp | 1140542 |
Gene Length | 1143 bp |
Protein Length | 353 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177227 |
Protein GI | 219110951 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000123745 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TATTGGTTTT TTAAAGGGGT CAGCAGAGGA TCTTTTGGCT GCAAAGGCGT AGTAAAGACG GCTGGCCCGT TTTACGCCAT TCTTGGTTTT GCAGGATTTC CGCTCGTTTG GTGCTTGCAG GAGGCATTGG TAACAGCAGA ATTGGGATTG GCTTATCCGG AGCCTTCTGG AGCTATTGCA TGGATTGAGG AAGCATTTGT ACCCTGTGCA GGATTACTTT GTGGCTATTT AGATTGGGTG TCTGGCGCAA CTGACAATGC AATTTACCCC AGCTTGTTCT TAGAGTATCT CTTGTCTTAT ATTGGACGCG GTGGAGAAAC ATTTTTGCAA CATCCCTCAT GGTGTTTTTG TTTTTCCGGT GTTATTTCTG CTGCCCTTGC TTTGATAAAC TACATGGGGC TGGAAGTGGT GGGAATCCTA TCCATTGTTG TATGCGTCAT TTCCATGTCT CCTTTTTTGT TGTTGTCTAT GTTTGGTTTA CCCAAGGTGG ACCTGGCATG GTGGTTGGTA TTTCCTACAG GAGACATTGC TTTAAGTACC AAGGGGGATG ACGAAATTGT GAACTCTCTG GGTGTAGATA GTTTTCTACC GGTGATTACA ATTGGTGGTG TTCTGTGGAG GCCGTTCGTC AACAGTTTGT TCTGGAATAT GAACTCATTT GATGTTGGAG CAAGTTTTGC TGGAGAAGTA CAGGACCCTG AGCGAGTCTT TCCCAAAGCC ATGTTTCTTT CCGTCTCTTT TGTAGTATTC AGCTATCTAC TTCCAGTCCT GATTGCCCTA GGAGCGTCGG ACTTGGTACA GAGCAATTGG AATGCGGGGT ACTTCACAAC AGTAGCAGAG AAAGTTGTTG GTCCGTGGCT GGCAGTGTGG ACGGTGTTTG CAGCAGCAGT TTCCGACATT GCCCTGTTTG AAGCCAAAAT GAGTGGGGAT GCTTATCAAC TTATGGGGAT GGCGGATTGT GGTCTGATTC CGAAAAAGTT TTGCAAGCGG TCTCGATTCG GCACGCCTAC AAACGGTATT CTTGTTGGAA CCTTTGTTAT TTTCTGCTTG GGTGTGGTGG ACTTTGAGTT GTTGGTGGAA ATGCTTAATT TCGCTTACAG CGTTTCATTG CTGATGGAGT TTGCAGCCTT TGTCAATCTT TGA
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Protein sequence | YWFFKGVSRG SFGCKGVVKT AGPFYAILGF AGFPLVWCLQ EALVTAELGL AYPEPSGAIA WIEEAFVPCA GLLCGYLDWV SGATDNAIYP SLFLEYLLSY IGRGGETFLQ HPSWCFCFSG VISAALALIN YMGLEVVGIL SIVVCVISMS PFLLLSMFGL PKVDLACFLP VITIGGVLWR PFVNSLFWNM NSFDVGASFA GEVQDPERVF PKAMFLSVSF VVFSYLLPVL IALGASDLVQ SNWNAGYFTT VAEKVVGPWL AVWTVFAAAV SDIALFEAKM SGDAYQLMGM ADCGLIPKKF CKRSRFGTPT NGILVGTFVI FCLGVVDFEL LVEMLNFAYS VSLLMEFAAF VNL
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