Gene PHATRDRAFT_9233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_9233 
Symbol 
ID7196160 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1139400 
End bp1140542 
Gene Length1143 bp 
Protein Length353 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177227 
Protein GI219110951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000123745 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TATTGGTTTT TTAAAGGGGT CAGCAGAGGA TCTTTTGGCT GCAAAGGCGT AGTAAAGACG 
GCTGGCCCGT TTTACGCCAT TCTTGGTTTT GCAGGATTTC CGCTCGTTTG GTGCTTGCAG
GAGGCATTGG TAACAGCAGA ATTGGGATTG GCTTATCCGG AGCCTTCTGG AGCTATTGCA
TGGATTGAGG AAGCATTTGT ACCCTGTGCA GGATTACTTT GTGGCTATTT AGATTGGGTG
TCTGGCGCAA CTGACAATGC AATTTACCCC AGCTTGTTCT TAGAGTATCT CTTGTCTTAT
ATTGGACGCG GTGGAGAAAC ATTTTTGCAA CATCCCTCAT GGTGTTTTTG TTTTTCCGGT
GTTATTTCTG CTGCCCTTGC TTTGATAAAC TACATGGGGC TGGAAGTGGT GGGAATCCTA
TCCATTGTTG TATGCGTCAT TTCCATGTCT CCTTTTTTGT TGTTGTCTAT GTTTGGTTTA
CCCAAGGTGG ACCTGGCATG GTGGTTGGTA TTTCCTACAG GAGACATTGC TTTAAGTACC
AAGGGGGATG ACGAAATTGT GAACTCTCTG GGTGTAGATA GTTTTCTACC GGTGATTACA
ATTGGTGGTG TTCTGTGGAG GCCGTTCGTC AACAGTTTGT TCTGGAATAT GAACTCATTT
GATGTTGGAG CAAGTTTTGC TGGAGAAGTA CAGGACCCTG AGCGAGTCTT TCCCAAAGCC
ATGTTTCTTT CCGTCTCTTT TGTAGTATTC AGCTATCTAC TTCCAGTCCT GATTGCCCTA
GGAGCGTCGG ACTTGGTACA GAGCAATTGG AATGCGGGGT ACTTCACAAC AGTAGCAGAG
AAAGTTGTTG GTCCGTGGCT GGCAGTGTGG ACGGTGTTTG CAGCAGCAGT TTCCGACATT
GCCCTGTTTG AAGCCAAAAT GAGTGGGGAT GCTTATCAAC TTATGGGGAT GGCGGATTGT
GGTCTGATTC CGAAAAAGTT TTGCAAGCGG TCTCGATTCG GCACGCCTAC AAACGGTATT
CTTGTTGGAA CCTTTGTTAT TTTCTGCTTG GGTGTGGTGG ACTTTGAGTT GTTGGTGGAA
ATGCTTAATT TCGCTTACAG CGTTTCATTG CTGATGGAGT TTGCAGCCTT TGTCAATCTT
TGA
 
Protein sequence
YWFFKGVSRG SFGCKGVVKT AGPFYAILGF AGFPLVWCLQ EALVTAELGL AYPEPSGAIA 
WIEEAFVPCA GLLCGYLDWV SGATDNAIYP SLFLEYLLSY IGRGGETFLQ HPSWCFCFSG
VISAALALIN YMGLEVVGIL SIVVCVISMS PFLLLSMFGL PKVDLACFLP VITIGGVLWR
PFVNSLFWNM NSFDVGASFA GEVQDPERVF PKAMFLSVSF VVFSYLLPVL IALGASDLVQ
SNWNAGYFTT VAEKVVGPWL AVWTVFAAAV SDIALFEAKM SGDAYQLMGM ADCGLIPKKF
CKRSRFGTPT NGILVGTFVI FCLGVVDFEL LVEMLNFAYS VSLLMEFAAF VNL