Gene PHATRDRAFT_56488 details

Gene Information

• Locus tag: PHATRDRAFT_56488
• Symbol: ZEP2
• ID: 7196921
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 2222646
• End bp: 2224755
• Gene Length: 2110 bp
• Protein Length: 604 aa
• GC content: 50%
• Product: precursor of protein zeaxanthin epoxidase-like protein
• Protein accession: XP_002176935
• Protein GI: 219110367

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGTGACATT GCAAGCCGAT CCGAGGGAAG GTCACCAATC TTGTTCGAAA GAAACACATC 
CGCTGCCTGG AATCCTTCTG TCACTAACAG TCAATCCGGC AAGAAAGGTC TCCCAAGGAA 
CGAATCGATC TGAATTGGCT ACGTTGCCTC TGATTGACGA CAACGATCGT ATGGGTCTTT 
CGTTTCTATC ATTATGCGCC GTGCTGACGG CGTCGTCCGC AATGGCCTTT GTCACCACCC 
GATCACCGGC TTGCAACGAC GTGACTCGAT CACTGCATAG AATCAATACA AGGCACATGA 
CCTACCCATT TTACCCGGCA TCCTCTCTCC GTATCTCCAC GCGCGTTGCG AGCACGGCGG 
TTCCTCCGGA AGACGTTGCC TTTGACAAGC TAAGTTTACC CGCTCGCGAG GGCCGGCCTC 
TGAAGATTGC TATTGCCGGC GGTGGGGTAG GCGGTTTGAC GACCGCTCTC TGCATGTTGA 
AAAAGGGTTT CGACGTGACG GTGTACGAGA AGACTGCCGC CTTTGCCCGC TTTGGGGGAC 
CCATCCAGTT TGCCTCCAAC GCCTTGTCAG TCCTGAAAGA AATCGACGAA ACCCTCTTTG 
AGCGTGTCAT GGACAAGTTC ACTTTCACCG GAACACGAAC CTGTGGGATC AAGGACGGTT 
TGCGAGCGGA TGGAAGCTTC CGGATGACGG AAGATCGTCT GGATTATTTG TGGAATCCGG 
ATGCTCCGGC CGATTGGTTC GTCAAATTTC CGCTCAAAGT ACGTTGCAAC ACACTCCAAC 
CATTCACAAT CGAGGCCGTA ACACGAAAAC TTACCTTTCA CTTCTTTGGT ATTATTATCT 
CTAGCAATGC GCCGATTTGT TCGGTTTACC CTACACGGGT GTCATTGACC GTCCCGATTT 
ACAAGAAATT CTCATTGACG AATGCCGCAA ACTTAAACCC GACTTTCTCA TCAACGGCAA 
TCCCGTCGTA GGTTACGAAG ACTTAGGCAA AGGCCAAGGT GTGACAATCA ATTTAAACGA 
TCAGACAACT GCGTCCGCCG ATGTTCTAGT AGGATCGGAC GGAATTTGGT CAGCCGTACG 
TGACCAAATG TACAAGGAAG GTGGTGTCAA ATCTACCAGT GCCAACAAGA AGAAACGGCA 
GGGATGCGAC TATTCCGGAT ACACCGTCTT TGCGGGAGAA ACAATCCTCA AGACCCCGGA 
CTACTATGCA ACTGGATACA AGGTATACAT CGGACCCAAG CGGTACTTTG TTACGAGTGA 
TGTCGGTGAT GGCCGCATTC AGTGGTACGC CTTCTTTGCG CTACCTCCCG GAACCAAAAA 
AGCTCCCAGC GGTTGGGGTG GCTCCACTCG TGACGGACAG ACGGATCCGG AGGAGAATCT 
GGTAGACTAC GTCAAGGGCT TGCATGAAGG ATGGAGCGAT GAAGTCATGA TGGTTTTGGA 
CTCGACGTCA CCAGACAGTG TGGAACAACG TGACTTGTAC GATCGGGCGC CCGAATTATT 
TCGCAGTTGG GCGAATGGCA ACGTCGTACT CATTGGTGAT GCAGTACACG CCATGATGCC 
AAACTTGGGT CAAGGAGGTT GCCAGGCAAT TGAAGACGCC TACGTCTTGA CGGAAACTTT 
GGCGAACACA CGCACCACAG AAAAGCTGCA AGATGCATTA CAAGAGTACT ACCGCAAGCG 
CATCGTACGA GTGAGTATTG TGCAGTTTCT GAGTAAGCTG GCTAGCGACT TGATCATCAA 
CGCGTTTGAC ACCCCCTGGA GTCCACACGA CAACCTCGGA AAGTCCTGGA AATCCTACTT 
GACATTCTTT TGGAAGCCTA TCTTGCAGTT CGCCATTTTT CCAATGCAGT TCGCCTATCT 
TTATTCCTAC TATCCGACGG GGAATATGGG TGATCTTCCG GCCAAATTAG AAGCAATTTG 
GAAAGAGAAG CACAAAACAG ATGCCGAAGC TGTGTTTGAG CAAGCATCCA AGGAAGGCTT 
TGTCATGGAA CACGAAGCGT CCTTTTTCAA AAAAGCGGAA GTAGAATTGT CCCCAACAGC 
TTTGGCAGCT ACGAAAGAAG AACTAAGCTA GAAGTGAAGA AATTCCATAG TTTTCATTGT 
AGCCTTTCGG 

 

Protein sequence

MGLSFLSLCA VLTASSAMAF VTTRSPACND VTRSLHRINT RHMTYPFYPA SSLRISTRVA 
STAVPPEDVA FDKLSLPARE GRPLKIAIAG GGVGGLTTAL CMLKKGFDVT VYEKTAAFAR 
FGGPIQFASN ALSVLKEIDE TLFERVMDKF TFTGTRTCGI KDGLRADGSF RMTEDRLDYL 
WNPDAPADWF VKFPLKQCAD LFGLPYTGVI DRPDLQEILI DECRKLKPDF LINGNPVVGY 
EDLGKGQGVT INLNDQTTAS ADVLVGSDGI WSAVRDQMYK EGGVKSTSAN KKKRQGCDYS 
GYTVFAGETI LKTPDYYATG YKVYIGPKRY FVTSDVGDGR IQWYAFFALP PGTKKAPSGW 
GGSTRDGQTD PEENLVDYVK GLHEGWSDEV MMVLDSTSPD SVEQRDLYDR APELFRSWAN 
GNVVLIGDAV HAMMPNLGQG GCQAIEDAYV LTETLANTRT TEKLQDALQE YYRKRIVRVS 
IVQFLSKLAS DLIINAFDTP WSPHDNLGKS WKSYLTFFWK PILQFAIFPM QFAYLYSYYP 
TGNMGDLPAK LEAIWKEKHK TDAEAVFEQA SKEGFVMEHE ASFFKKAEVE LSPTALAATK 
EELS