Gene PHATRDRAFT_56448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_56448 
Symbol 
ID7196067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand- 
Start bp282168 
End bp282922 
Gene Length755 bp 
Protein Length205 aa 
Translation table 
GC content47% 
IMG OID 
Productfucoxanhin chlorophyll binding protein related 
Protein accessionXP_002177056 
Protein GI219110609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCTGCACC ATTTGTAGTG TTGCGAAGGA TTAATACAGG TCATGATATT GCACCAATGA 
AAAAGATTTT GAAAAGATCC ACAATTTGCT GCTGTCTCGG ATTATATACG GGATCTCCGT 
GTTCTTACGC ATTTCGACCT CCTCCAATCT CGGAAGAAAT TGGCTGCAGT CCTACCCTGG 
CAATCTTTCT CAAAGAGGAT TGCCACTTTT TCGACCCATT AGCACTGGCA AACGATGACA 
ATTTCTCTCG ATTCCGGGAA AGTGAATTGA AACATGGACG AATTGCTATG TTGGCCGTGG 
TGGAATCCAT TGTCACGCCT TTGCTACGGA AATCAACTGA CTGGGTGCCA AAGAAGTTGC 
CCGACAGCAT TTTGAAGAAG TTCCAGATCC TCAACGCCGA GGACATTGTA AGGGTTGTGG 
TGTTGTGTGG CATACTCGAA ACACTGGTTT TTGTCCAACG AGACCCCAGA GACATGCCGG 
GGGATTACGC TACTGGATAC TTCTTTGTTC GAGACAAGGC TCTGAACGAG CGCAAATTGA 
CGGTCGAGCT AGAAAATGGT CGGCTTGCCA TGATTGCTTT TGTAGGTCAA ATTGCGGCAG 
AGTTTGCAAC CGATCAATTG AGCTGGGAAG AGCAGTGGCG CGGGATCCTG AAAGGATGGC 
TGGATGCAGT CTGAAAATTG CCCGGAAACC ATGGGTTGCG CGCGTCATCC GTTTGCACCT 
GAGATTGGCA TTTTGCCACT CTTTTTTCTT AAACC
 
Protein sequence
MKKILKRSTI CCCLGLYTGS PCSYAFRPPP ISEEIGCSPT LAIFLKEDCH FFDPLALAND 
DNFSRFRESE LKHGRIAMLA VVESIVTPLL RKSTDWVPKK LPDSILKKFQ ILNAEDIVRV 
VVLCGILETL VFVQRDPRDM PGDYATGYFF VRDKALNERK LTVELENGRL AMIAFVGQIA 
AEFATDQLSW EEQWRGILKG WLDAV