Gene PHATRDRAFT_54049 details

Gene Information

• Locus tag: PHATRDRAFT_54049
• ID: 7196757
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 2181608
• End bp: 2183655
• Gene Length: 2048 bp
• Protein Length: 646 aa
• GC content: 53%
• Product: acetyl-coa transporter
• Protein accession: XP_002176926
• Protein GI: 219110349

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.511026
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGTCGA TCAACGACAG TAGTAACAAT CCCTATTCCC ATGTGACGGC ACCTTTCCCG 
TCGGCAGAGT TTCGACCCGA CATTAGCACC ACCACGCGCT ACCGCGTGTC CTCCAACACA 
GCAAAGCAAG CGGCGGGTGA TCCTTCGGAC GGCGATGACA ACTTCCAGCA TCCGAACTCG 
AGCTCTCCCC AGTCGCCTTT CCCGCTCGAC GACGAAGTAA AACCGGCACC CGACCACGAT 
CGCTACAATT ACGCCATCTT AATTGCCCTA TACACACTGC AGGGAATTCC GATGGGCTTA 
TCGGCCTCGA TTCCGTTTCT GATTCAACAA AAGATGAAGG CGTTCGCCGA GAACGCTGCC 
AGTGCCGCCA TTCCCGCCGC ACTCGCGGCA GCCGCGGGTA GCGGGGCTTC CTCGATGACG 
ACGACGGCAG CACAGGCGGC ACGTCTCAGC TACAACGCCA ACGCTATTTT CGCACTCTGT 
AGCTGGCCCT TTTCGCTCAA GTTGCTGTGG GCTCCTGTCG TTGATGCCTG CTTTCTGCGA 
GGCTTTGGAC GACGCAAGTC CTGGTTGGTG CCGGTCCAAC TGCTGGCTGG ATTGCTCATG 
GTGGGTGGGG CCAATTTTGT CGAGACGCAA CTTGGGCTCG GCACCAACAA CCATCTCGTT 
ACTGAATCTT TCAACGTCAA GGGCGTCACC ATATTTTTCT TTGTCCTTTA CGCGCTCATG 
GCCACACAAG ACATTGCAGT GGATGGATGG GCGTTGACCA TGTTGAGTAA AAAAAATCGA 
GGTCGGGGAC CAGTGTGCAA TTCGATCGGT CAAAATATCG GATACTTTTT GAGTTTCGTC 
GGGTTTCTGG CTCTCAATGA TGCCGACAGT AGCGAAAGCT TATGGCGTCC TCTTTTTGGG 
TTGCCGTCCA ATCCCGATAC CGGATTGGTA TCGTTAGGGG GATTCATTCG GTTTATGGGC 
TATTTCATGC TAATAACTAC CACGGCGGTC GGTCTGTTCA AGCACGAAAC GACGACCTCA 
ACGATGACCA GAATGAAAAG ACCAGTAGAA CAAAATCTGC CTCCCACATC AGAAGTGCTC 
CTTGCGTCGG ATCGTCTCAA AAAGACCGAC GGAAACGGCG ACGAAGAACA TGAGTTGGAC 
GCATCCGAAA TTGGTCTCAA GGAGACCTAC CATCGACTTT GGGCGGTTTG TAAACTCCCA 
GCCGTACAAT GGTTGTTTTT GATTCTTTTT ACCTATCGAT TGCCGACGGC ACTGGGTGAC 
AACGTCAAGT TTCTGAAAGC CGTTGAATTG GGACTTTCCA AGTCAACGAC GGCCTTACTG 
TCACCGACCG TAATCCTTCC CTTGGGTATT CTGGTTCCAA TTGTTGCTAC GAAATTGTGG 
CATGGTCATC CTTTACGACA ATTCACAACG GCTTTCAAGC TTCGCGTAAC GCTCGTTCCA 
TTTTTGGATC TACTCATGCT GTCCGTGTTG CGTCGAGGCA AAGGGACAAC TTCCTCGGCC 
AGTATCTTGT TCTGGTCCTC CATTATTGCG TCCACAGCGT TGCAGGCAAT CGTCAGCAGT 
TTGCAGTTCA ATGCACAAAT GACATTTTTT GCTAGCCGGG TGGATCCGGC TATTGGTGGC 
AGCTACATGA CACTTTTGAA TACCGCCGCT AATTTGGGCG GAACCTGGCC AGCATCCTTT 
ATCATGTGGT TGACGGGAAA GCTAACCCGC GATCCAGAAT GCTTCGTGGA CATGGCTACC 
GGCGTGGAAA CGTGCACACA GGGACGAGAT CCCTATGCTG TCTTACAAAT TTGCTTTGGC 
GTTTTGGGCT GTTTATGGAT TGCGCTGCTG GGTAATCGTG TGCATCGGAT AGCGGAACTA 
CCGGATGACG CATGGCGGAC ACATTTGCTG GACGGCACCG TCGATGGCGA CAATGTTCTG 
AATTCGAATC GTACAGCCAC GAACATGTAC GATCCGGAAA GTGGCCTAAC GAGTGTGGAC 
GTTGAATTGG CCGCGGCCAG TACAAAGAGC ACCACGCGCT GGGAACGCAA CGAATCCAAG 
CGGGAATG 

 

Protein sequence

MASINDSSNN PYSHVTAPFP SAEFRPDIST TTRYRVSSNT AKQAAGDPSD GDDNFQHPNS 
SSPQSPFPLD DEVKPAPDHD RYNYAILIAL YTLQGIPMGL SASIPFLIQQ KMKAYNANAI 
FALCSWPFSL KLLWAPVVDA CFLRGFGRRK SWLVPVQLLA GLLMVGGANF VETQLGLGTN 
NHLVTESFNV KGVTIFFFVL YALMATQDIA VDGWALTMLS KKNRGRGPVC NSIGQNIGYF 
LSFVGFLALN DADSSESLWR PLFGLPSNPD TGLVSLGGFI RFMGYFMLIT TTAVGLFKHE 
TTTSTMTRMK RPVEQNLPPT SEVLLASDRL KKTDGNGDEE HELDASEIGL KETYHRLWAV 
CKLPAVQWLF LILFTYRLPT ALGDNVKFLK AVELGLSKST TALLSPTVIL PLGILVPIVA 
TKLWHGHPLR QFTTAFKLRV TLVPFLDLLM LSVLRRGKGT TSSASILFWS SIIASTALQA 
IVSSLQFNAQ MTFFASRVDP AIGGSYMTLL NTAANLGGTW PASFIMWLTG KLTRDPECFV 
DMATGVETCT QGRDPYAVLQ ICFGVLGCLW IALLGNRVHR IAELPDDAWR THLLDGTVDG 
DNVLNSNRTA TNMYDPESGL TSVDVELAAA STKSTTRWER NESKRE