| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54028 |
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| Symbol | AP3delta |
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| ID | 7196839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1863155 |
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| End bp | 1867077 |
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| Gene Length | 3923 bp |
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| Protein Length | 1277 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177390 |
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| Protein GI | 219111277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.214816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAAA AGACCTTGAC CGACGTGGTC AAAGGAATTC GGGCTTCCAA GCGTGACACG
GGTCTCTACA TTTCCCAATG CATTGCGGAA ATCAAAACAG AAATAGCCAG TGCCGACATG
TACGTCAAGG CCAACGCCTT GCAAAAGCTA ACCTTTCTGC AAATGATGGG GTACAGCATG
AACTGGGCCA GTTTCGCCAC GATTGAAGTC ATGAGCAGCG CCAAATTTGC CCACAAACGC
GTCGGCTATC TTGCCGCCAG TCAGGGATTT ACGCCCGAAA CTGACGTTAT TCTACTCACC
ACTAATCTGC TCAAGAAAGA ACTCCGGGGT GCCACCGGGA ACGGCGGCGC TTCCATGCAC
GGCGTCTACG AAGCCGGACT CGCCATTAAT TGCATTTCCA ATATCGTCAC GGAAGATCTG
GCGCGGGACT TGTTGCCGGA ATTGACCGAT CTTACGTCTC ACCCACAGCC CTATCTGCGC
AAAAAAGCCA TCCTGTGTCT GTTCAAAGTC TTTGTCAAGT ATCCGCAAGG TCTTCGTTTG
ACCTTTGCCA AACTGCAAAC GTGCTTGGAC GATTCCAACT CGGCCGTCGT GTCGTGTGCG
GTCAACGTCA TTACCGAGCT CTCCGACAAA AATCCCAAAA ACTACCTGCC GTTGGCACCC
GCCTTTTTTC AACTCGTCAC CTCCTCGAGC AACAATTGGA TGCTGATTAA GGTCGTCAAA
CTACTCGGTA GCTTGGTCCC GGAAGAACCC CGCTTAGCCC GCAAACTACT GGAGCCCTTG
GCCAACATTG TCCGCCGAAC ACAGGCCAAG TCACTGCTGT ACGAAGCTTG TTACACCATT
ACGCTGTGTT TGCCCTATTG TCGCAAGAAC GATGGCACCA TGCCCGCGAT TGTGCCCGAT
ATTGTGACCC TGTGTGCCCA AACGCTGCGG AGCTTTGTCG AAGAGCCAGA TCAGAATTTG
AAATACCTCG GATTGGTCGG CTTCGGTTCC CTCATGCAGT CGCATCCCCG AGTCTTGAGT
GCACCAGACT ACCGCCCTCT TATCCTCGCT TGCTTGTCGG ATCAGGATGT TACTATCCGT
ACACGAGCGC TGGATTTGCT GACGGGTATG GCCTCGCGCA AAAACTTGCC GGAACTCGTC
TCGCAGCTGC TTCAACACGT CGAGCTGGCG TCGGGTACCT ACAAACATGA CCTCGTCCGC
AAAATTGTGA TCATGTGCTC TTCCGAAAAG TACGCCTTGT TGTCCGACTT TGGTTGGTAC
TTGGACATTT TGTTTCGGCT TGGTCACATG CGTGGCGTTG AAAAACACGC CCAGCTTTTG
CACGCCCAAA TAGTGGATGT CGCGCTGCGC GTTTTGCCAA TAAGGGCGTT TGCCGTCAAG
CGGTCCATGG AAATTTTGTT GGAAGGCGAA GGCAGCGTTT CGGACGACCT GTACGGAGAC
AACGGCCGCG GTAAGCATCT CATGCCCGAA ATTCTGCCCG GTATTGCGTG GATTGTTGGT
GAATACTCCA ATCTGATTCC GGAAGCCGGT AAAGATGACG ACGATGACGA AGACATGGAA
TTCTTTTACG ACGAAGACAG CAAAGGAACA TACCACGCAG TAATTCAGGC ACTGACGACG
ACCACGAATA TTTCCAATCT TCCAACGGTG ACGCAAAAAG TGTATATACA AGCCGCGATG
AAAGTCTTGG CCGCAGCAAC GTCCGAGAAG GACGTAGGTG ACGCGGAACT CGAGGCTTGT
ATTGCCGCAA TGGATCGCGC GCTGCCCGTT TATACACAGA GTGTGGATGT GGAAGTAATA
GAACGTGCCT TCACTTCACT CGAGTTATTG CGCTCTCTAG ATTTGATTAC AGACACGTCA
AAGGGTTCTA TACCTAGCCT TGCTTCTGTT GAAGACGACT CCGACGATGA AGCAGTCGAA
GGAGATCTCC TCGGAATGCT AAGCGGTACG ACTAATTCTG CTGCAGTTGT GCCCACTTTT
GTAAATGCAA CCAATACAAC GGTAGCAATG TCTCTGGCGT CGAAAGCTCG ACAGGCATCA
ATGACTCTTA ACTATTTACT CAAACCGAAA CCAATGAAAC CGTCAGGCGC TAAGGTACAA
CGAAAGAAAC GGCACGCTCC GATCGGGGTG ACGGTAGACA TTGATGCACC TGTCAACCTA
TCAATTTTTC AAAAACTGAT CGACGGCGAA AGCAAATACC GCTCCACGTC TAATCTGAGA
GTCGAGTCTG TGAGCTTTAC CCAGCAACGC CCTGCCAAAG TCGAAGAATC TAAACACTAC
CATCCTGATA CACGGCCTCC GGGCAGTTTA TCTGCCTCAC AAGATGCATC TACAAGTTTC
CAAAATCAGA GGAACGCTGT TGGGGTCCCT ATCAACTCAA AATCTCGCGA AAGTGATCCT
TTCTATCTCG ATTCGGCCCC GCAAAGTGGA ACAGAAGGAG AACGTGATTC ATCGGGTCGA
TTTGGCACAA TACAGCTGCT GGACAGTGAC GACGACGCTG CGAACGAAGG GAAGGTTAGG
AAAAAGAAAG TCAAGAAATC GAAACGAGCC AAATCCAAGG TTACTGTGGA TGGGTCACTG
ACATCCTTCG GAGAACAGCA GAGCTCATTT TTGGAACCAG TTGTGAATAT TTACGAAAGC
GACAATAGTG AGAAGGGCAA AGCAACGCTT GCGCCTCGAA CTAACTTCAA AAGTCGCGAA
TTCGAGGGAC TAGCTATGGT CGATCTCACC ACTCCGTTGC GAGATGACGA AGTAATGCCG
GAGCGAAAGC ATCACATCGT TGCGGATTAC TCCGTCGACA ATTCAGCAGC CGTTGCGCCC
AAGTCGAAAA AGAAAAGTAA GAAGTCGACA AAGTTGTCCA AAAAGAGATC AATCCGTAGT
GAAAATACCG TCGGAGATCT TCTGGACCTC GGCGGGATGG AGAGTATGCC AGTCTCGCAG
AATTCAAACT CCTTTACTCC AGTGGCACCC GTATCGGATC CGTCAAGCGC CATCAATCCA
ATCAATTCTG CATTCGATGA CCTCATGGGC TTTTCTGACC CTACTCCAGC ACTACATATG
ACATCTTTTT TAACCTCGTC TTTGCAAAGC CATCATGTCG AAGAAACATC CTCTTCACTC
CCGGCATCCA GAAAAACGGG AAAGCAACCC TGGATGCTAG GGATGCTTAA GGCTTCAGGC
AGTGTTGGAT TTACTGGAAT CGACATCTCT ATGATCTCGC TAACGTATCG ACTTTACCAA
AATTCCAGTC CTTCTGGCCT TGCATCAAAG GCTGTACTAC GTTTAACCAA TTCTTCCGGC
TCTCCTATCG ACAACTTGGT ACTGGAGCTG AACGACGGTT CGTCTTTTCC GATTGGCAGT
GCTGCGCCCC GATCGCACAC GGAATCCAGC AAGGTTGGCC CGTTCATGTA CTCGGCCATC
GACCAATCTC TTGAAGTGAA AGGAAGTTTG AAATGCTCGC TCGGTAGTTT GCGAATGAAA
CTACTTCTTC CTGCTGCACT TCACCTTGTT GCCGAACAAG GGATATCATT CGATCAACTC
ACTCAGGAGC TCCTATCATC CCAATGGTCG ACTCACTCCA CCAAGTTACC GCTATCCAAT
CGGACGAATC CCATTAGAAT TATGAAAGTA ATCACACATT TCTTCCATGC AGCCCAAGTG
ACTGGGAGTG CGTCGACCCC AGCAACAGAG ACGCTTGCGG CACGATCTAC CAAGGGAGCC
AAGGTGCGAA TTCTTGTCAA AATCAAGGAA AACTTCGTCA AGTTGGATAT AAAATCGACC
GACGACGCTT TGGCGCGCCA TCTCTGTGCC GATGTGAAGC GCTGTGTTCT ATAGGATTTG
TTTGCAATGT ATCAGTTCCA TTCATTGTTG CACGAATGTA ATTCGATTTC TTCGCCGCAA
AATTTAAACC AATGATAGCT TAC
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| Protein sequence | MFEKTLTDVV KGIRASKRDT GLYISQCIAE IKTEIASADM YVKANALQKL TFLQMMGYSM
NWASFATIEV MSSAKFAHKR VGYLAASQGF TPETDVILLT TNLLKKELRG ATGNGGASMH
GVYEAGLAIN CISNIVTEDL ARDLLPELTD LTSHPQPYLR KKAILCLFKV FVKYPQGLRL
TFAKLQTCLD DSNSAVVSCA VNVITELSDK NPKNYLPLAP AFFQLVTSSS NNWMLIKVVK
LLGSLVPEEP RLARKLLEPL ANIVRRTQAK SLLYEACYTI TLCLPYCRKN DGTMPAIVPD
IVTLCAQTLR SFVEEPDQNL KYLGLVGFGS LMQSHPRVLS APDYRPLILA CLSDQDVTIR
TRALDLLTGM ASRKNLPELV SQLLQHVELA SGTYKHDLVR KIVIMCSSEK YALLSDFGWY
LDILFRLGHM RGVEKHAQLL HAQIVDVALR VLPIRAFAVK RSMEILLEGE GSVSDDLYGD
NGRGKHLMPE ILPGIAWIVG EYSNLIPEAG KDDDDDEDME FFYDEDSKGT YHAVIQALTT
TTNISNLPTV TQKVYIQAAM KVLAAATSEK DVGDAELEAC IAAMDRALPV YTQSVDVEVI
ERAFTSLELL RSLDLITDTS KGSIPSLASV EDDSDDEAVE GDLLGMLSGT TNSAAVVPTF
VNATNTTVAM SLASKARQAS MTLNYLLKPK PMKPSGAKVQ RKKRHAPIGV TVDIDAPVNL
SIFQKLIDGE SKYRSTSNLR VESVSFTQQR PAKVEESKHY HPDTRPPGSL SASQDASTSF
QNQRNAVGVP INSKSRESDP FYLDSAPQSG TEGERDSSGR FGTIQLLDSD DDAANEGKVR
KKKVKKSKRA KSKVTVDGSL TSFGEQQSSF LEPVVNIYES DNSEKGKATL APRTNFKSRE
FEGLAMVDLT TPLRDDEVMP ERKHHIVADY SVDNSAAVAP KSKKKSKKST KLSKKRSIRS
ENTVGDLLDL GGMESMPVSQ NSNSFTPVAP VSDPSSAINP INSAFDDLMG FSDPTPALHM
TSFLTSSLQS HHVEETSSSL PASRKTGKQP WMLGMLKASG SVGFTGIDIS MISLTYRLYQ
NSSPSGLASK AVLRLTNSSG SPIDNLVLEL NDGSSFPIGS AAPRSHTESS KVGPFMYSAI
DQSLEVKGSL KCSLGSLRMK LLLPAALHLV AEQGISFDQL TQELLSSQWS THSTKLPLSN
RTNPIRIMKV ITHFFHAAQV TGSASTPATE TLAARSTKGA KVRILVKIKE NFVKLDIKST
DDALARHLCA DVKRCVL
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