| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_53933 |
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| Symbol | |
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| ID | 7196034 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 137742 |
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| End bp | 142116 |
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| Gene Length | 4375 bp |
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| Protein Length | 1258 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177023 |
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| Protein GI | 219110543 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTTC GGCATCGTCT TCGTGTACGC CCTCCTAGTT TTGGCTTTCT CAAGTTGCAT
TGGCTTTTGT GTTTGTGTTT CGGGCAAGCT ATGTTGCCCC GAAGTTTACA GCGGCACGGT
AGTCGGAGAC ATTCGCTCCT TTGGAAAAAC CCAGAGTATT CCGGGTTGCG CGACTGTTCC
CATCTCTTGG ATTGGAACAG GATACATCGT CGATCCTACT CCGCACTTGC CGTGTGCCAA
GCACAGAGCA ATCCTGGACC GTCACCGCCA GAGAAGAATA ACACGCCATC CTTACAGGAC
TTGGAAGCTG AATTTGCCAG GCTTCACGGG CAACCTGTCA ATGTCAACAG TCCCAAGCAA
GTATCAACGG CTATATTTGG TAGTATTCAG AGTACAGCCC GTGACCGACT GGAACGCGTG
ATCGAGGGCA GTCTCTTTGT TCCGTCACTG AATGGCCCAC GCTTGGCCGC TCTGGTCCTC
CAACATCGAG CGCTTACCAA AATATTGGAA GATACGGCAG GCAACAGTGG CGTCGAACAA
AACAGGACGT TCCCGAGTGC CATCTCGACG TCACCTCTTC TCGACCTCGG CGGCACCAGC
CATTGATCCG GAGGAGGACG AGCCGGAGAT GCTCGTGTCA AGTCCTGTTG CTGCAGAAAC
ACCGGAGATC GCTTTTCAAA GGTCGTCCTT TCCCACACAG TGTCATCGGA ATCAGTGTCC
ACCAATTCTC CCTACGAACG ACAAGTCGAA GCGCTTTTTC AACACAAAAC GACGCTAATA
CACACGTATT GGCAGGAACC TCTGCTGCAG GTTACCCGAC CCTCGGCGCG TACATTGGTT
GCACAGCTCG ATGCGACACA GTGTCCGATG GGCTACAACC CATTAGCGCA GCCCATGGAT
CCCTTACGCG GTACTGTGTT GGACACGGAC GCACAGTCAT CTTCGTCGAC GACCGCCACG
ACTACGGCAG GCAAAAAGGG ATCCTTTCTG GCCTATTGTC GTCAACAAAA GGAAAGCTAT
CCCGATTGCA TCATTCTCAC ACGATGTGGA GATTTCTACG AAACGTTTGG ATTAGATGCG
GTAATGTTAG TCGAGCACTG TGGATTAAAT CCAATGGGCA ACAAGGCCAA AGCGGGCTGT
CCCTATCGCA ACGTACAAGC AACTATTGAC GGATTGATAA GCCAAGGGTT TCGGGTAGCT
GTCTACGAAG AAGCGCCCGA CACAGATTCT TCAACTGGGA CAGGCGCTAC GGGTGGCGCC
AAATCGCGCA TCAAGAGTCG CTTTCTGGCT CAAATCGTCT CTACCTCATC GCCAACCTAC
CTTTACGGTC TCGTTCTGCT AAGCAATGCA GATACTTTGG TGACAGCTCC GCCATCTCGT
CCCCACGTCG GTATCTTGTC ACTGGCAGCT GGATACACGA TGGTTGAAAT CTCAATCGAA
GAAAGGAATG TGCGCGTGTC TGACCGTTTG ACGCCGGAGG CAGTGGCTTG TCGATTGGCG
GCGTATCCTC CGGCGGATCC TTTGTTTTAC GTACCGTCGG AAGGAGAATA CGAATACAAA
TGCAGTACCA GTGATCTGCG AAGTTTGCCC TTCTTGCCGT CTCGCCGAGA TTCGTTTGAG
ATAGGGTCAT CCGGGGCGAG GCTAAGGACT ATCATAATCC CTCCTACAGT TGTGGAGGGG
CCAGGTGTTG CCGGAGTGAG CGAAGCAGAA CGAGCCAAAC GCATTATAAC CGCATCCTTG
TTGGATATGA TTAAAAGCCC ACGAAGTAGC GAGAATATTG CCTCCGATCA AACGGCTACC
GTTGAAGATT TTACGCTGCT GGCACCGTCG AACACACAAG CTGATTCCCA TACAACTTCA
ACCAACCCGC TTTATGTTGA GACCGCTATG CAGCTTGGAC TAATGAATGA TTACGCCATC
CCTTCTCTCG TCTCGCACAT TCTTCCAGAG TCGGCTCCTG CAGCAACCCG ACGATTCCTG
CGTCGATTCC TTCTCACTCC GCCTCCGCCG CGAGTTGGCG ATGCCATGGC TACGCTGGTT
CGAATTCTCC AGAGCAGCGA TGCATCTTTG CCCCCGCTAA CAGTTCCTCC AGTTGGTAAA
GTATTGGCTC TGCTGAGGGC CGGTCAAGCG AGTGCTCAAG TGTACACTGA GATGCTAAAA
TCTATGCATT CTATGGTGCT TTTGTTGGAC ACATTTCCAA GTAACTCTGA CTTTGTTCAA
TCACTCATGA CCCTTCTTGA GTACGAAAGT GGTCTGGCTG GCGATCCCAA TTCCTTACGT
GATCGATGTC ATGAGGCTAT TAAGGAAATT GAAGCTATTA TAAGTCCAAT TCACCACTCA
TCTTGGTCGG AACTGGACCC ATCAGCTATT GACTGCATTA CCGACTTTGG GGGCCTCGTA
CCCCGAGCAT TCTTTGAACG GAACGAGGCC ACTTGGCGCG GGCGGGTACA GCCGGATGTG
GTCCTAAAAT CCTACACAGA TGTGCAGCGG GCCGCTGAAC TACTTGGGGA AGCGGTTGCC
AAAGACTTTT GGCAAACCCC CCGTCAAGAT TTGGAGGGAA ATCCTGACAC TACTTCGAAG
AGTCTCATCG CTCAGGATAT TTTTAATAAC ATTTTAGCTA TGAAGGAGGT TCCACAAGGT
GCCGACAAAG ATCTCTTTTT TCATCCACGC GACCGCAACG GAAAAATACT TCGGAACCGG
TTTACTACAG AATACGTACA ATCGGCATTG TCTGATTACG TCGCCGCTTG TGACCGGGCT
TGTCAGGACG TGACAGACAC TCTTGTTCGC TTGAGTCAGC TTCTCTGCGA CGATGGCCAT
ATTCCTGCGG TTGTCCAAGC ATCTCATGCA AATTTGATTT TATCCTCGGC CTTTCATCAT
GCCGTTCGAG CGAACGCTGC AGGATGGAAC TTGGCGCGCA CGTACGAGGC CACTCTGAGC
GAGGACACGG CTGGATACTT AAAAGACCTG TGGCCGTATT GGATGGACAA ATCAGAGGCA
ACATCAAATT CTTACGAATT GAATGGAATG TGGCTTCTGA CGGCACCGAA CATGAGTGGT
AAAAGTACTA TTATGCGATC AACCGCTGCC GCGGCATTGT TATCCGTTTG CGGCCTGTGT
GCACCTCTTG GGCCTGGCTC TTCCATACGA CGCTTCGACC ATATTTTCGT ACGTGGTGCA
TCAGCCGACG TTCCCTCGGA GCAAAAATCC GCGTTCGGTG CTGAAATGGG AGACATCGCG
GCTTTGTTAC GATCTTGTGG GGGGAAGTCC CTTGTTTTTG TTGACGAGCT TGGTCGAGGG
ACATCGCCCA GGGATGGAAC TAGACTGGCT GGTGCTGTGT TAGAAGCGAT GACAATGAGT
GGAATGAGCG GAATTTTTGC TACGCATCTC CACGATGTTC TTGATTTACC GCTTCGTTCA
AAAGGACGAA TTGTTAAGAA GAGGATGGGT GTACACAAGT GCCACCTCGA TGGCCACCAA
TGGACATATA GATTGGAAGA CGGTGTATGT ACCGACAGCC TCGCGCTGTT AACTGCCGCA
CGCTTTGGTC TTCCTGAAAG TGTCATCCAA AGAGCCGAAG CTCTGGACTC CTACATTCCG
CGTGCGTCAT CCTCTGTACT CCCCGATAAC TACAAAGCCC AGAGCATTCC AGATGGTGTA
AACGGATTTC CTGGGCGCAT CTTCGGTCTC GAAAACATTG TCTCCCTAGC CGAGGAATGC
ACCGGTGTTC GCTCCCTTCA AATTCCTCCG CAGTGGAACG TTCCAGCATC ACTAGACGGT
AAGTCCTGTA TATATATATT GCAAATGGAA CAGGATGGTC GAGAGGCACC CCGCTACTAC
GTAGGAGAGT CAGACAATCT TCGCAAGAGA CTCGCGCAAC ATAGAGCCAA AAAGGGACAT
TGGTCTAACG TTACAGCTCT GGCGTTACCA GCGGCAGATA AGTCTCAAGC TCGTGCATGG
GAGAGTCTGA TAATCCGGAG ACTAAGCAAA ACAGGCGTAT CCCTCATCAG CACCACTGAT
GGTAGATCCA TTCGATCGGC AAGGCAGTAG TTCCCAATAT CATGCCTTTA TATCTGGCTC
TTGAAGAGTG CTGTACGATC GAATTATTGG CCTTACTCCG TTTTGGACGT TGCTAGCATG
TTGTCGTAAA GATAATCCAA TGCTGTGCGT CGTGACAACA AAATTACAAT CGTTTAGAGC
TTTTGAGCAA GGATTTCCGT TGGTGATCCA GCAGTTGTCG CATCATTCCT CGCAAGTCTT
TTCGGTACGT ATCAGCAGAA CCAGCAGGGA CGCTCATGCG GTAGCGCAAC TCATCCGTGG
ACAAGCTCTC CGCTAGCTCC AGCATAGTGC CAAGCACGGT ACTGATATGG TTTGG
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| Protein sequence | MLFRHRLRVR PPSFGFLKLH WLLCLCFGQA MLPRSLQRHG SRRHSLLWKN PEYSGLRDCS
HLLDWNRIHR RSYSALAVCQ AQSNPGPSPP EKNNTPSLQD LEAEFARLHG QPVNVNSPKQ
VSTAIFGSIQ STARDRLERV IEGSLFVPSL NGPRLAALVL QHRALTKILE DTAGNSGVEQ
NRTFPSAIST NTGDRFSKVV LSHTVSSESV STNSPYERQV EALFQHKTTL IHTYWQEPLL
QVTRPSARTL VAQLDATQCP MGYNPLAQPM DPLRGTVLDT DAQSSSSTTA TTTAGKKGSF
LAYCRQQKES YPDCIILTRC GDFYETFGLD AVMLVEHCGL NPMGNKAKAG CPYRNVQATI
DGLISQGFRV AVYEEAPDTD SSTGTGATGG AKSRIKSRFL AQIVSTSSPT YLYGLVLLSN
ADTLVTAPPS RPHVGILSLA AGYTMVEISI EERNVRVSDR LTPEAVACRL AAYPPADPLF
YVPSEGEYEY KCSTSDLRSL PFLPSRRDSF EIGSSGARLR TIIIPPTVVE GPGVAGVSEA
ERAKRIITAS LLDMIKSPRS SENIASDQTA TVEDFTLLAP SNTQADSHTT STNPLYVETA
MQLGLMNDYA IPSLVSHILP ESAPAATRRF LRRFLLTPPP PRVGDAMATL VRILQSSDAS
LPPLTVPPVG KVLALLRAGQ ASAQVYTEML KSMHSMVLLL DTFPSNSDFV QSLMTLLEYE
SGLAGDPNSL RDRCHEAIKE IEAIISPIHH SSWSELDPSA IDCITDFGGL VPRAFFERNE
ATWRGRVQPD VVLKSYTDVQ RAAELLGEAV AKDFWQTPRQ DLEGNPDTTS KSLIAQDIFN
NILAMKEVPQ GADKDLFFHP RDRNGKILRN RFTTEYVQSA LSDYVAACDR ACQDVTDTLV
RLSQLLCDDG HIPAVVQASH ANLILSSAFH HAVRANAAGW NLARTYEATL SEDTAGYLKD
LWPYWMDKSE ATSNSYELNG MWLLTAPNMS GKSTIMRSTA AAALLSVCGL CAPLGPGSSI
RRFDHIFVRG ASADVPSEQK SAFGAEMGDI AALLRSCGGK SLVFVDELGR GTSPRDGTRL
AGAVLEAMTM SGMSGIFATH LHDVLDLPLR SKGRIVKKRM GVHKCHLDGH QWTYRLEDGV
CTDSLALLTA ARFGLPESVI QRAEALDSYI PRASSSVLPD NYKAQSIPDG VNGFPGRIFG
LENIVSLAEE CTGVRSLQIP PQWNVPASLD EPKRDIGLTL QLWRYQRQIS LKLVHGRV
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