| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43251 |
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| Symbol | Arf1 |
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| ID | 7196600 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 2447634 |
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| End bp | 2448775 |
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| Gene Length | 1142 bp |
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| Protein Length | 184 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177519 |
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| Protein GI | 219111535 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.8255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GAAGAGTTGT AGTCCTGTAG ATTTGTTTGG TTGTTGCGGA AATACAAAAA ACTTCACTCG
GATCAAACGA TGGGTCTCAC TTTCTCCCGC GTGTGGGAGC GTATGGTAAG GCAGTAAAGT
TATGGCAGTG CAGAAGATAA CGAAAGAAAG GTTACGGTCG ACGATTGGCG AGTAGCAAAG
CTACGGCGAC CTGGGTCACG CAGTTCCGCT TACGTAAACT TTTACGTAGA ATTTGTACGG
AGAAGTCATT CCGGACGGAT CCACGGCGTT CCCCTTCGAC CGTTGCGAAG ACTATCTCGA
AGCAATTGGT CATCCTTCTC TCGGCAAATC GACTTTCTCA CCATGTGCTC TCGCTGCCTT
AATAGTTCGG CAAGAAAGAG ATGAGAATCT TGATGGTGGG TCTTGATGCC GCTGGTAAAA
CTACCATTCT CTACAAACTC AAGCTTGGAG AAGGTGCGTG AAAAAAAAGG AAAATTGGCT
CCGTCGCAAG TGCTATTCAT CGGAGGAGTG GCAACACTAG GCACTGTTCA CGTTTACGTG
GTTTATACCG TAATCTAGCT CTTGACTGAC CAACTGTCTT TACTCCTACT CAACAGTTGT
TACGACAATC CCTACCATTG GCTTTAATGT CGAAACCGTG GAGTACAAGA ACATCTCCTT
TACAGTCTGG GATGTCGGTG GTCAGGATAA AATCCGTCCT TTGTGGCGTC ACTACTACCA
GAACACCCAA GGTCTGATCT TCGTTGTGGA TTCTAATGAT TCTGATCGTA TCGATGCCGC
TCGTGACGAA CTACACCGAA TGCTGAACGA AGACGAATTA CGCGACGCCG TGCTTCTCGT
TTTTGCCAAC AAGCAGGATC TTCCCAACGC TATGAGTGCT GCTGAAATGA CCGACAAACT
TGGATTGCAT GGACTGCGTC CATCGTACCG TCAGTGGTAC ATCCAGGCCT GTTGCGCGAC
CACGGGTGAT GGTCTTTACG AAGGTTTGGA CTGGCTTTCC GCGACATTGG TCAAGAGAAA
CGGATAAAGC AAAATTTACA TAAGTAATGA TGCGAATACC GTTCTTTTGA ACCCGTCACT
TTCAGAATAA GTAAATAGCA AACTAAGCGT AGCGTGTGAG AATGTGAAAC GTTACCCTAT
GC
|
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| Protein sequence | MGLTFSRVWE RMFGKKEMRI LMVGLDAAGK TTILYKLKLG EVVTTIPTIG FNVETVEYKN
ISFTVWDVGG QDKIRPLWRH YYQNTQGLIF VVDSNDSDRI DAARDELHRM LNEDELRDAV
LLVFANKQDL PNAMSAAEMT DKLGLHGLRP SYRQWYIQAC CATTGDGLYE GLDWLSATLV
KRNG
|
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