Gene PHATRDRAFT_43202 details

Gene Information

• Locus tag: PHATRDRAFT_43202
• Symbol: SLY1
• ID: 7196570
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 2300835
• End bp: 2302953
• Gene Length: 2119 bp
• Protein Length: 648 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002176953
• Protein GI: 219110403

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.197482
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGCTCTGAG TAGAGAACAA GTCTCCGTGT TTTACGGATC TTTGAAATAC AAAGCAAGCA 
GCTTTTAGAA GTGACCAAGA GCTATGAAGG ACTCCTCTCT AAAATCCGCG CAGTTGGCGG 
CGGTACACCG GATGCTCGCC TTTAACGAAG TGGACGGGAC GGCGTACGAA AATGAGTACG 
CGCTGCCGCC CGCTGGAAGC AGCCACAATC AGTGGAAGAT TCTAATTTAC GATGCAGCTT 
GCCAAGCAAT CATTTCTCCG ATTCTTTCGG TTCAGCAGCT ACGACGACGG GGGGTGACCT 
TGCACTTGTT GTTGAATAGT GAGCGTGAGC CCATCCCCGA TGTACCGGTC ATTTACTTTT 
GTCGACCGAC CAAGCAAAAT TTGGCAATCA TTGCGCAGGA CTGTGCCAAG GGTCTCTACG 
GGCGCGCGCA TTTAAATTTC GTAACGAAGC TTGATCGATC ACTGATGGAG GAATTTGCCA 
AGCTTGTTGT ACAGACAGGA TCGTTAGAGT CGATTGCTTC CGTGCATGAC CAGTATCTGG 
ACTATGTTTG TATGGAAAAA CGACTATTTA GCTTGCACAA AGTCAATTCG TATGTCACTT 
ACAATAGTTC CGGAACAACT GAGGAAATGA TGGAACAGGC AATGACGGAT ATTGCGTACG 
GCTTGTTTTC GGTAGTAGCT ACGCTGGGAC AGATTCCAGT GATTCGTTGT CCCCGGGTAA 
GTGCAGGCTT GTGAGGAGCT GGTGACCACA GGAAGCAAGT TGTTATGACT TTCGTTGATT 
TGGTGCTCAC ACGTGTTTTG AATAGGGGGG TGCTCCGGAA ATGGTGGCCC GTCAATTGAA 
TCGAATGATA GCTGAGCATC CAACACTGCT CAGGAATAAA TCTTCTCTGA CGAGACCACT 
TCTTGTTATT TTGGATCGGA ATGCTGATTT GATCACTCCG GTTCAGCATA CCAGTACGTA 
CCAGGCGTTA ATCGATGATC TTCTTCGTCA TAAGGCGAAC CGCGTGGAAT TTGAAGTTGT 
TCAAGATCCG GATGCCAAAC GTCCGAAAAC AATTCTCAAG AGGTTTGATT TGGATCCAGA 
CGAGGACGCA TTTTATTCCG CACATAAGTT CCAGCCCTTT CCAGAAGCCA TCGAAAGCAA 
CGGCACGGAG CTTCAGGAAG TCACCACGAG AGAACAAGCT ATACGCTCTA AAGCGGGAGG 
AAGTGATGCT CGCAACGACC CCATGGCTTC AGGTGCAACC GATTTAGCGA ATGCTGTGGA 
TTCATTACCT GCTCTCTTAG ATCGTAAAAA ACAGCTAGAA GTACACACGA GTATCCTACA 
AGCAGTCATG AATGAAGTAG CCACACGAGA CGTTCCTCAG TTCTACGAAC TCGAGTCGTC 
TTTGGCAACT GGGGCGTACA GGAACGACTT GGCTAAAGCG AAAAAGGAGG TTTTGGCCCT 
CGTGAGTGAT GAAACCAAGG GAAATATTGA CGACAAGATC CGCTTAGTGA TGGTGTACAC 
TTTAACAACG GCTGCTAAAA CTGCCGACTT GGAAGAAGTG AAAGTGACTT TGCAACAAGT 
TGGCGATATT TTGGGAGCGG AGGACAAAAC GGCGTCAACT CGTCTCGCCT CGGGAATCAA 
AGCTTTACAG TATCTCAAGC AGCTCCGGTC TATGCATATG ATTCCTTCTG CTACTGATAT 
GTTGCAAGAG TTGCAAACGC CATCGTCTGC CAGTGAATCG TCCAGCACCA TGCTGAGCAG 
CCTCATGGCC AAAGCTACAA CGCAAGCTAC TGGTTTATTG GCGAAGGCTA CGGATCGTGT 
GGCCTCCATG TTGGGTAAAA TCCACAAGCA CCACGCCACA GTGGTAGTCG AAAATTTGTG 
CGAAATGGCA CAGGGTAGCG AGGATGAAAC TTATCTATAT TTGGACCCTA AGGTCAAGGG 
AGACGTTGAT ATACACAAGC TACGTGGCAT GAATCGAGCA GCAATTCGCA ACGTAATTTG 
TTTTGTCATA GGCGGCGGCT CGTATGGAGA GTACCAGAAT TTGCAAATGC TGGCCAATGA 
TCGTCTACAG ATTGGGTACG GCAGCACGGA GCTTTTGGAC GCCGGATCCT TTTTGGCGCA 
ATTGGGACAA TTAGGATAG 

 

Protein sequence

MKDSSLKSAQ LAAVHRMLAF NEVDGTAYEN EYALPPAGSS HNQWKILIYD AACQAIISPI 
LSVQQLRRRG VTLHLLLNSE REPIPDVPVI YFCRPTKQNL AIIAQDCAKG LYGRAHLNFV 
TKLDRSLMEE FAKLVVQTGS LESIASVHDQ YLDYVCMEKR LFSLHKVNSY VTYNSSGTTE 
EMMEQAMTDI AYGLFSVVAT LGQIPVIRCP RGGAPEMVAR QLNRMIAEHP TLLRNKSSLT 
RPLLVILDRN ADLITPVQHT STYQALIDDL LRHKANRVEF EVVQDPDAKR PKTILKRFDL 
DPDEDAFYSA HKFQPFPEAI ESNGTELQEV TTREQAIRSK AGGSDARNDP MASGATDLAN 
AVDSLPALLD RKKQLEVHTS ILQAVMNEVA TRDVPQFYEL ESSLATGAYR NDLAKAKKEV 
LALVSDETKG NIDDKIRLVM VYTLTTAAKT ADLEEVKVTL QQVGDILGAE DKTASTRLAS 
GIKALQYLKQ LRSMHMIPSA TDMLQELQTP SSASESSSTM LSSLMAKATT QATGLLAKAT 
DRVASMLGKI HKHHATVVVE NLCEMAQGSE DETYLYLDPK VKGDVDIHKL RGMNRAAIRN 
VICFVIGGGS YGEYQNLQML ANDRLQIGYG STELLDAGSF LAQLGQLG