Gene PHATRDRAFT_43165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43165 
Symbol 
ID7196917 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2213067 
End bp2214036 
Gene Length970 bp 
Protein Length269 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176933 
Protein GI219110363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACACATATT TCTTCCTCTT TTCTTTGGAC CTTTCGTAGA ATGACGAAAT CTTCGCAGTC 
ATCGGGTGAT GCGAGACAGG GCTCTTCTCC GCTGAGGCCT GATTCTCCCT GGCGTGCCGC
GGGCCCGGAA GACGGCGACC CACATCCAAA GCGTCCCCGA GCGACGCCTT GGGAAACCTT
TCAGACGGTG GCGCTCGCAG CGTTGCCGAC CTGGACGAAA GCCTGTCTAC AAACGGTCCT
CGGAGCAACG GTGGTATTGT ACGTATTGAA TCAAAAGCAC CTGCTTCCCA AGCCGCTGTC
TGCCGTGGTG AGCCAAACCC TCTTTTGGCC GACCCTCCCT ATTACGGTGG GGCGTCGGAT
GGGCGCTTGG ACAACCGTAG TCGACGATAC CGTCATGATT GGTGGAGCTC CCTTTGGTTT
TGCTAAGATT CCTGAACGAC TCTACGAGCA GTACAATGTA CGTTTGGATT TGTGTGATGA
ACAAGGGATA CTATCCACCA TGTAGTTGAT CTACGGCAGT GGCCGTTTAG TGCCTTTACA
GCTGCTGATT GATGCTGTTG CTGCTTTATC GTGATAGGTG CGGGGTGTCA TCAACTTGTG
TGAAGAATAC CAGGGACCAG AGAAAAGCTA CCGTCGACTC GGAATGATTC ATTTGCGACT
TCCCACTGTG GATCATTTCG AACCGTCGCT GTTGGATTTG CAAAAGGCCG TCCAGTTCAT
CCAAAAGTAC AGGGACACCG GATCGCGCGT ATACGTCCAC TGCCGTGCTG GACACGGCCG
CTCCGCGGCC GCTGTCTTGG CGTATCTGAT CGAACAGAAT CCTGACGCAG ATCTACAAGA
ACTCAACGAA TACCTATGCT CGCTGCGCGA CGTACGACCA ACGCTCTGGA CACAGAATAA
CATTCGGCAG TTTCAACGCA TGCTCCGACG CAACCTGGAC GCTCTTTTGA AAGACTCGCC
GAAGGACTAA
 
Protein sequence
MTKSSQSSGD ARQGSSPLRP DSPWRAAGPE DGDPHPKRPR ATPWETFQTV ALAALPTWTK 
ACLQTVLGAT VVLYVLNQKH LLPKPLSAVV SQTLFWPTLP ITVGRRMGAW TTVVDDTVMI
GGAPFGFAKI PERLYEQYNV RGVINLCEEY QGPEKSYRRL GMIHLRLPTV DHFEPSLLDL
QKAVQFIQKY RDTGSRVYVH CRAGHGRSAA AVLAYLIEQN PDADLQELNE YLCSLRDVRP
TLWTQNNIRQ FQRMLRRNLD ALLKDSPKD