Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43165 |
Symbol | |
ID | 7196917 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 2213067 |
End bp | 2214036 |
Gene Length | 970 bp |
Protein Length | 269 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176933 |
Protein GI | 219110363 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACACATATT TCTTCCTCTT TTCTTTGGAC CTTTCGTAGA ATGACGAAAT CTTCGCAGTC ATCGGGTGAT GCGAGACAGG GCTCTTCTCC GCTGAGGCCT GATTCTCCCT GGCGTGCCGC GGGCCCGGAA GACGGCGACC CACATCCAAA GCGTCCCCGA GCGACGCCTT GGGAAACCTT TCAGACGGTG GCGCTCGCAG CGTTGCCGAC CTGGACGAAA GCCTGTCTAC AAACGGTCCT CGGAGCAACG GTGGTATTGT ACGTATTGAA TCAAAAGCAC CTGCTTCCCA AGCCGCTGTC TGCCGTGGTG AGCCAAACCC TCTTTTGGCC GACCCTCCCT ATTACGGTGG GGCGTCGGAT GGGCGCTTGG ACAACCGTAG TCGACGATAC CGTCATGATT GGTGGAGCTC CCTTTGGTTT TGCTAAGATT CCTGAACGAC TCTACGAGCA GTACAATGTA CGTTTGGATT TGTGTGATGA ACAAGGGATA CTATCCACCA TGTAGTTGAT CTACGGCAGT GGCCGTTTAG TGCCTTTACA GCTGCTGATT GATGCTGTTG CTGCTTTATC GTGATAGGTG CGGGGTGTCA TCAACTTGTG TGAAGAATAC CAGGGACCAG AGAAAAGCTA CCGTCGACTC GGAATGATTC ATTTGCGACT TCCCACTGTG GATCATTTCG AACCGTCGCT GTTGGATTTG CAAAAGGCCG TCCAGTTCAT CCAAAAGTAC AGGGACACCG GATCGCGCGT ATACGTCCAC TGCCGTGCTG GACACGGCCG CTCCGCGGCC GCTGTCTTGG CGTATCTGAT CGAACAGAAT CCTGACGCAG ATCTACAAGA ACTCAACGAA TACCTATGCT CGCTGCGCGA CGTACGACCA ACGCTCTGGA CACAGAATAA CATTCGGCAG TTTCAACGCA TGCTCCGACG CAACCTGGAC GCTCTTTTGA AAGACTCGCC GAAGGACTAA
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Protein sequence | MTKSSQSSGD ARQGSSPLRP DSPWRAAGPE DGDPHPKRPR ATPWETFQTV ALAALPTWTK ACLQTVLGAT VVLYVLNQKH LLPKPLSAVV SQTLFWPTLP ITVGRRMGAW TTVVDDTVMI GGAPFGFAKI PERLYEQYNV RGVINLCEEY QGPEKSYRRL GMIHLRLPTV DHFEPSLLDL QKAVQFIQKY RDTGSRVYVH CRAGHGRSAA AVLAYLIEQN PDADLQELNE YLCSLRDVRP TLWTQNNIRQ FQRMLRRNLD ALLKDSPKD
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