Gene PHATRDRAFT_42968 details

Gene Information

• Locus tag: PHATRDRAFT_42968
• ID: 7196205
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 1657469
• End bp: 1659630
• Gene Length: 2162 bp
• Protein Length: 609 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002176827
• Protein GI: 219110151

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCGACACAT ACAGGCTTAT AAGGAGCACT ATGTGTTGAA CAAGTTACAA GTATAGAATC 
GGCAGCAAGA AGGTAAGACA ACAAGCGAGA ATGTCCCGAA ACAACGCTTT TTACTATTTG 
CGCCGAAGAA AGGTGCGATG GCCGTGTTTG CGATGGTAAC GAGGGGCGCA AAGTGTTCCG 
TCATAAATGC TTGTGGAGGT CACTTCTCAT CTTCTTCACA AGTTCAATGC CTCTATTCGA 
AGCTTCCCAT TAAGGAATGA AGAAAACTGT CCTACAATGC CTCAAGATCA TCGGCGTTCT 
CTCTACCGAC TTGACGAGTT GCGACTCGTT ACAGCAAGAG TTCGTCAACA TCAAACGCGT 
CTATTTCAAA AAGATTCTTG TGTGCCATCC GGACAAAGGC GGCGACGCAG AAGTCTTCCG 
AAATGTGCAA ACTTCCTTTG AAGTGCTGCG TGGAATCTAC GAAAAGGAGG CTATCTCATC 
TTTTATCACA GAATCGGCCT TTTCCGCCCA AAATTTCGAC GATGTCTTTC GAGATTTTGG 
TGAGATGCCG ACGCCATCTT GGGAGTATTA TCATGAAGCT GCAGAAGAGA ATTTTCCCTT 
GTACCGCGTA GAGCGAGCTC GGTCCAATCG TAGCCGCTGT ACACAAACAA CAAAACTTGG 
GAAGAAGTGC GGGGATGATA AATTGATCGC CAGTGGCTCG GTTCGTGTAG GTTCACTTGA 
CGAGAAGACG GGAACATACA CACGATGGAA TCACTTGGAA TGCTGGCGCG TTCCGAGCCG 
TATATGGCTT GGTATTGCAA GTTCTCGTGA GGACGAAGAT TCGGTTCTAA ATACGAAAAA 
TGTGCTTCAG TCTCTTCTAC AAATGAATGA CGTTCTTCTG AGTGGAATAA ATGAGATGAA 
TGTTGAAGGG CAGATGGAAT TCGTCACGCA TATCATGGAT CGGTCTAGTT GGGCTCGGAT 
TTCTCAGCGC AGGAACATCA ATTCATCTAA GGAGCTAGAT ATGTCTGTCG CCAAACAAAC 
TCAACCGGCA CGTCAGGCGG CCGTCTTTCC ACGTGACGGG CCTTCATCAC GGGAATCATT 
CATTGTTCCA ATCCCCGGGG AAAACGGCGT AGCCTCTGAC GCTTTGAAAG GGAAACGGGT 
TGTTTTGACG GGCGTATTTC CGGAAGTTGG CGGAGGCCGC GGCTTGACAC TTGGCAAAGA 
GAAAGTCAAG AAGATGGTAG AATCTTTCGG TGGTCGTGTT ACAGGTTCAG TGTCTGGAAA 
AACGGATATG GTACGTAAGT TGGGCACTTT TGAACTAGGA TAATTCTGAA AGTGTTCTGA 
TAGTATTTAC ACTTTCTCCA TCGACGAACT TGAAGTTAAT TGTGGGCAAG GACCCTGGTT 
TTTCCAAAGT TTCTCAGGCC CGAGGTCGAA GCGTTACGTT GTTGAGTTTG AAAGATCTGA 
AGGAAGGCAT CGAGAGCAAC TGTCTCGAGT ATACACGGCA CGAGGACCTC AAAATCTCTT 
CCTTTTCTTC GGGTTACAAA AACAACTCCG CTGCGCTGTC GGCTTCGAGC AGCGACTTCG 
CCATTGCTGC TGGTCAAGCT CCAGCGCTTC CGCAGGCAGG ATTGACGAGA TCTTCTAACT 
CAAAAATGCC AATTGCGAGT TCGGGGACCT ATGCATTTCA TTCTGCAATA AAAGCGCAAC 
CAGTGTTGCC TGTGACGCTA TCGTCGACGT CGCCATCATC ATCCAACCTC CTAGAATCTG 
CCAAATTCGT AGTAGGCAGC CATGAGGCGA GTCCTGTGCG TTCTGCTGTG CCGAAAGGAG 
GGCACGGCTT ACTGGGTAGA GCCCGGTTTG TCGAAGCACC GACTATGCTC CGAACGAAGC 
TACAGGAAGC TATACGAACC GGCGCAACGA TGGACCAAGA GTCGAAGATC CCGATCAGTC 
AAGAAACACA AAGAACTCTA GAGAACACTC TTGCAGAAAT TGACGGAGTT GGAGAGCAGG 
GTCCACAGCC GCAACCAAAC ATACCCTTGC CTGACCTTTG CGACTCAATA AAAGGTCTGC 
CCTTCCGAAT AACACGATAT CGTTATAAAA CGCTGAAGGC GGAAGTAAAC TTACAAAAAC 
AAAGGACGGC CAAACGTGCG CGAGAAGGTG GGTAAACGGA CGCCTCGACA AGCAATTTGT 
GG 

 

Protein sequence

MKKTVLQCLK IIGVLSTDLT SCDSLQQEFV NIKRVYFKKI LVCHPDKGGD AEVFRNVQTS 
FEVLRGIYEK EAISSFITES AFSAQNFDDV FRDFGEMPTP SWEYYHEAAE ENFPLYRVER 
ARSNRSRCTQ TTKLGKKCGD DKLIASGSVR VGSLDEKTGT YTRWNHLECW RVPSRIWLGI 
ASSREDEDSV LNTKNVLQSL LQMNDVLLSG INEMNVEGQM EFVTHIMDRS SWARISQRRN 
INSSKELDMS VAKQTQPARQ AAVFPRDGPS SRESFIVPIP GENGVASDAL KGKRVVLTGV 
FPEVGGGRGL TLGKEKVKKM VESFGGRVTG SVSGKTDMVL FTLSPSTNLK LIVGKDPGFS 
KVSQARGRSV TLLSLKDLKE GIESNCLEYT RHEDLKISSF SSGYKNNSAA LSASSSDFAI 
AAGQAPALPQ AGLTRSSNSK MPIASSGTYA FHSAIKAQPV LPVTLSSTSP SSSNLLESAK 
FVVGSHEASP VRSAVPKGGH GLLGRARFVE APTMLRTKLQ EAIRTGATMD QESKIPISQE 
TQRTLENTLA EIDGVGEQGP QPQPNIPLPD LCDSIKGLPF RITRYRYKTL KAEVNLQKQR 
TAKRAREGG