Gene PHATRDRAFT_42942 details

Gene Information

• Locus tag: PHATRDRAFT_42942
• ID: 7196775
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 1585903
• End bp: 1591659
• Gene Length: 5757 bp
• Protein Length: 1474 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002176812
• Protein GI: 219110121

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTTT CTTTGGGAGT AGCTTCCCCA GAACAGCCTG TGGCCTCTGT GACGAAAACG 
CTTGCTAAGT TGTGTTCAAT CGCTTCGAAT CGCTCGTGTG CCGACTGCCG TGTTACGTTA 
ATAGATTCCT CCCAAGTGCA CGCTTCCTTT AATCCCAAAA TCGAACTGCC TTCAAGCCAA 
TACAATAATT TTCGGCTCAA TCATGTCAAT TTCGCCCCTC CTAACTATTC TCCTTCAAAA 
ATACCGGAAA CTCTCGACCC ACCGGTTGAC CCGAGCCTTG TCGCGGCTTC CTACGTCGGC 
GGACACGGCG TATTCGTATG TGCCCTCTGC GGAGCAGCGC ACAAGCTCCT CGGTAGAAGC 
ATTACCGTTG TTTACGCTGT CCAAGATTCT TCCACTTGGA GTGTTGAAGA GGTTCAGCTC 
TTGGTCAAAG GCGGCGGAAA TAATCGGGCA CGATCTGTTT TAGAAGCGCA TATACCTCAC 
TCGTGGAAGC AGAAACGACC AAATGCCGAC AGTACAATAG CGGATCGTCT AACATTCGTG 
CGAGCGAAAT ACGAGGCGCT CGCATTTGTG TTACCCCCAT CGGGTCCGTT TGCGAACCGG 
GCTTGGAGGG CGATTCTGGA TCGCCACCAG GATGAATGGG AAGGCAATTG GGGTGCTGAT 
TTACATTCGT TCTCAGAGCT GCAGTTGGGA GAGTCGCATT CTCAGCGTGC CTCGCGCAAT 
TTGATGCAGT CAGTCGAAAA CGGGAATCGT GAATCGATCC TTCCTAACAG ATTGGTAGAC 
TATTTTTGTG TGGTGACCCC TTCTGAATTC GTAATTCCTG ATATGTTGGG CTTGGACCTT 
TCGGAGCTAT CATCTCCGGA GGATGTATTG CTGGTTCCCG AGGTAACTGA CTGCTTTCCG 
AATCAGGAAG CTCACGCAGA TACTGAATTT CCCAAACACA TTGGCTCACT TGTCGTGCCC 
GATGGCTGCC GACCGAGTCT TACCCCACGG CCACCATCCT TCTTCTCCTT TGTATTGACG 
TGTGGCGACG GCGTACGCCT TTATGGCGGC GCCCTTTGCC TGTACGATAA TGATTCTGAC 
GTAGAAAATC TTAAGGAAAA GTTTCGAATC TCTGGCTATG AAGGACAGCT GCCAGGATGG 
ATGGGATCAG AAAGGTCGCG TTTGGTGCAT GATCAAGATA CCAGGAGCTC TTCTTTCCAG 
TCCGAATCTG ATGTCTATGT GGATGTCGTT TACTTTCCCA AGGTGCTAGT TGTCGTATCG 
CATTATCCGT TTTTCGACGT CTGGAGAAAA TTTTTGTTAC AAATTTACCG AATTGCGTTG 
GTCGGAGCCC CGTTGCCTAT TGAACGCTTC ATCGCCAACT TTGTAGGCGA AGTGCCGCTG 
CCCCCGCCGG GCAAAATTCT GGTCAAATTT GGTTTAACAG TGAACGACAC CTGGAGTATT 
GGACGACCTC CAGAGAATCA GCTACCACTT GCTGATTTTT CTTTTCAGCC ACTTTTTGCT 
GCGCTGTCGG TTTCGAACGT CATGGTGGTG ATAGGATGCT TGCTGGAAGA GGGACGAGTC 
GCTTTACTGT CGAGGCATTA CGCCATGTTA GCACCTACGG CAGAAGCGCT TGTGAGTCTT 
TTATTTCCGT TCCACTGGCA AGGCATGTAC CTTCCAGTCT TACCGTACAA TATGATTGAC 
ATCTTGGGCG CCCCTGTTCC ATTCTTGGTT GGTTTGCATT CACGATATCT CGTCGATGTA 
CCAGCCGGGT CAAGACCACG CGGTGTCGTT TTTGTGGATC TCGACCGTGA TGTCATTCAC 
TTGGGCTATG AATATGACGA AGTAACTCCA CGCTCCAGTC CAGCCCTTCC TGAACGACAG 
GCTTTGAAGC TTAAGTCAAA GTTGGAAACG CATGCGTCTG TAGCGTACGT TGAATGCGAT 
TCTGTGTTCT CTGCAGCAGC AACGAAGGCG GCAACAATTC TTACTGGCAA TGAAGAAGAG 
CTCCACAATA GCTACAGGGA TCCATACGCT CGAGCTTCGA AATCCGAATC ATGCCCGACT 
TCAGTGCGTA GGAAAGATAT TTTTGGAAGA CTGGACAGAG CCTACGCAGA CAACGAGTTA 
CAAGTTCCAA TCTCCGGCTT TCTTTCGGAG CATGGACAGT TCTATGAGCA AGATGCGTCG 
TCGACTCCGG ATTCCAAAGG ACAGCGCTTC AAATTTTTGC GCGCCGTGCG TCCGAGAGGA 
GGACTGAAAT CAAAGATATC AGCGGATTCC TCGGGTAGCG AAAGGTTTCA TGTCACTGGT 
TCACCTGGGA CAAAGTTGTT GGACAAGGAT GATCCATCTG GGTTTGACTC TTCCGAGATT 
CGAAATGCAT TTCTCCGGCT TTTCGTTTCG ATATTCCAAT CTTACCGCCA CTATCTCGAC 
AAAAATGGTT TTCGTTCCGA AGCGTTTATT GATTCGTTAA ACTGTTCAGA GAGGAGCTCA 
GAGTTTCTTC ATTGTGTGGT GAAAACACAG TTTTTCTCAA GGTTTTTGGA TGAACGGATC 
CAAAATCCTA GCGATCCAGA AATCCGTTTC TTCGACGAAT CCATTATCGC AAAGATAAAT 
CGGTCAAAAA AACAGACTTT CTCCAAAATT GGACGGGGCG GCGGGAAAAG GGAAACGTCC 
TTTCTAAAGG ATGATTCAAA TATGGTATGT AAGGAAAGAA TTCCTATTCT TTCGGTCTAT 
TGAAGCTAAC AAGCACACGT TCCTTATTCT TCGTAGGTCA ATGAGACGTT CACACCCCCT 
CCTCCCTCAA ACTGGGGTTT ACCCGATGAT GGTCGCACCT ATCACTACGG TTCCTTTCCT 
GCGTTGAACC CTGAGCTATT CGGTAAGGTT CGCCGTCCGA TGAAATGGCC CCGTTATGAT 
CAAAGATCAT CGGTTCGAAC GTCTCGTAGA ATCTCCGCAC TTGCGCAGGC AAATGAGAAG 
GCTTTTGTTG CGAGAGCATT AAAGCCCGTG TCGAAAACCC CAAAAATGTT GATGGCAGAG 
ACAAAGCGGG GTGTGAAAAA CCTCGATACT GCATTATCTG CTTTGTCAAG CCCATTTGTT 
CCATCTTCCC CAATGCGAGA GACCAATCGC GAAAGGAGAG CGACTGGTAG CTCTGACTTC 
TCAATGAGTG ATATTTCACT GTCGAGTGCA CTTGTTATGA GGGATGATAT TGTATCTACT 
GCAGAAGGAG TAGTTCTCAA CGCACGACGG AAGCAGGCAA TTCTACTTGG CATTATCATA 
AAACTGCAAA CACATTGCAG ATTGCATCTT GTCCTTAAAA AGGATCATCA GAGGGAAAGT 
TTCAGAGTGA GCGCTGAAGG TGATCGTAGC AATTTGGAGA CCAATGCAAT TATTTGTCTG 
CAGAAGTGGT ACCGAGTGCT ATCGGTGGGT CGTTCCACCA GAGAATGGTT CCGTAAACTT 
CGTTTTGCTA CATGCAGAAT GCAATCCCTT ACGCGTGACC GAATGGTGCG TGCCGGCTTC 
TTGTTATTGG TTACAGCCAT TTGTAGGGCG CAAGCACGTA TCCGAGGTTT TCAAACTCGA 
AAAATCGTTG CATCCATTGT TGAGCACCGG CTTCGTACCT ATAGAGAACA CATCTTCTTG 
CTTTGGAAGG CTTCGCATAC ACCTTTGAGC TATCGATGCA AGTTTTGGCC AATACTGAAA 
GTCGAAAGCT ATCTGCGCGT GCAGATGGCT GAGGCGGAGG TACATCGACT GTGGTCAAAG 
TTGAATATAC CTTTGCCAAC GAGCATGAAG AATTTGAGTA CAGAGCAGCC AAAGATCGTA 
AAGTCCGCTT CTTTGTTGCG CATGAACTTT GAAACGCATT GGGCTTGCAT TATTGTAAGT 
TTCCTTTCTT CAGAAAGATT TGCAAAACGA TAAGTTAGAA CTAACTCGTT TTTCCTTTGT 
CCCTATCAAG TTGAACATTG AGAAGCCAAT ACTAATTTTA GATTTTTCCC AAAAGGGCAA 
CAGTAAAGTA ACAGCTGGAC CAGAGGCCCA ACGCATCAAT TCAGAACGGG TTCAAATTTA 
CGACCGAATT TCGGCTTTGA AGCTCGAGCA GCAGCTGGCC CTATTTGATA GATTCAGCGT 
CCCGTTGAAG GGCAAGAGAA AGAAGTTAGC GCTGGCGGTG TCGATTTGTA GGTTTATTGA 
TGTCGAATGG TTTTCTTCAG TTTCATTACC TAAATGTGGA TCCCTCTCAC TCACTCACTC 
TCTCTTACAA CTAGGGCACG CCACTAAGCT TGCAGACGAA TCGACGGCTC TCATGCTGAC 
TCTCTTTACA GAATTGAATG ACTCCACAAA TATTAACTTT AAAGCGCCCA CAAAGAAGAG 
TTTGCGACGA TTTCCTCCAT CTCCCGCAAT CACTCCTTTG AAAAGGGCAT TGTGGGCCCA 
CGTGGCTTTG GAAGACCGTA TCCGTTTGAA CACTTTAGAG GTTGCTAGGA TAGGACTTCA 
TGATATCCCT CGCCTCTCAC ATAAGGTTGT CGGAAACAAT GCAGTGCAAA CGTCGGGGAA 
AAACCGCTTG GAGCTCATGA GGCGTGTCCT GAATTGTGGG GCTTCAGGAG TCAATACGGG 
CGAAACAAAA TCACTGCAGG CTAGGCACCT TTTCAAACCT CCCGCAATGT TCAATAGGAG 
CCACGCATCA AAATCTGATA GTATCCGCGA AGTTGAGTAG TATCTAGGAC TTCGATTCCA 
TAATATCATC AATATAACTC AAATAAAACC TTTGGATGTT AGTGAATGTA GAATAAGCTA 
GGAGCTTCAC TCCCTGGATA GGGGCTCATT CATTCCAATG TATTCTTTCG GAGCGAAATC 
ACTGACGTTT GATCAAAACC AGCGCGTTCT ACGGCGCTCA CCAACGCGGC AATCTGCTTC 
TCGATCTCGT CCTCAGAATC AACTCGGAGA CGCACGGTTG CTTGTCCACC TTTAGTACCA 
AGAGGCTTGA GCGCCGAAAA AGCATCCACA ACGCTGGTAG TAGATAGCAA ACTCCGATCG 
ATCGTATTGA TGCAAGCGAC ACACCCCATG GTAGGAATAT CAAGCTCGAC TTCGATATCT 
ATTTTACCCA AAACGTTGCT TTTCTGTGAC TCTTCTTTGT ATGTGTTCCA AAACTGTAGC 
CCTTCGGGAA ACAAGGCCAA CGACCAACGC ATGGTGGATA TCACAGCCCA ATTCGGAGCA 
TAGCGAGTAG TTGCTGTCAA GTAAACCAAC AAGGAAAGAA AGAACGGACG AATAGGCCCC 
AGGATTGTAT TAAATCCTGC GCACCCACCA ACCACTATGT TTATAAGCAA TTGAAGCATA 
CAACAAGAGC TTGCAAGGAG CGGTAAAACC ATGTCGCTCG CCACAGACCG AAAACTGGGA 
TGCATAGAAG AAAGAAGATG CAACAGCGGC TCCATGGTCG CTCCAGACAA CTGGATTAGG 
AAACGGGCCG AAAGAAGCGT ACCCGACACG AGGGCGACTT GCTTTAGGAC GCCGGGGGAC 
CAAACCAGAT GGTAGGAGTT GTCAACCGCC AAAGCCCGAG CCCGAATCTT CTGAAACAAC 
GTTTTGTGAG AATTTGGAGT CGCTCGAGAA GAGTGGTTGT CACGGGAAGC GCGAAGAGTA 
ATCAAATTAT CATTTGATCG ACATACTTGG CTTTGCTGGC TGGTTGGGAA AGCTACATCA 
GCGTGCACTT GGTGTTTTTG GCGGTCACAC CAGTATCCCC GAGAGACAGC GAAACAAATG 
AGCCACAACG ACCGACGCAT TTGGAAAAAA TTATTGAAAT TTTTTTGTTG TTAGGCG 

 

Protein sequence

MSLSLGVASP EQPVASVTKT LAKLCSIASN RSCADCRVTL IDSSQVHASF NPKIELPSSQ 
YNNFRLNHVN FAPPNYSPSK IPETLDPPVD PSLVAASYVG GHGVFVCALC GAAHKLLGRS 
ITVVYAVQDS STWSVEEVQL LVKGGGNNRA RSVLEAHIPH SWKQKRPNAD STIADRLTFV 
RAKYEALAFV LPPSGPFANR AWRAILDRHQ DEWEGNWGAD LHSFSELQLG ESHSQRASRN 
LMQSVENGNR ESILPNRLVD YFCVVTPSEF VIPDMLGLDL SELSSPEDVL LVPEVTDCFP 
NQEAHADTEF PKHIGSLVVP DGCRPSLTPR PPSFFSFVLT CGDGVRLYGG ALCLYDNDSD 
VENLKEKFRI SGYEGQLPGW MGSERSRLVH DQDTRSSSFQ SESDVYVDVV YFPKVLVVVS 
HYPFFDVWRK FLLQIYRIAL VGAPLPIERF IANFVGEVPL PPPGKILVKF GLTVNDTWSI 
GRPPENQLPL ADFSFQPLFA ALSVSNVMVV IGCLLEEGRV ALLSRHYAML APTAEALVSL 
LFPFHWQGMY LPVLPYNMID ILGAPVPFLV GLHSRYLVDV PAGSRPRGVV FVDLDRDVIH 
LGYEYDEVTP RSSPALPERQ ALKLKSKLET HASVAYVECD SVFSAAATKA ATILTGNEEE 
LHNSYRDPYA RASKSESCPT SVRRKDIFGR LDRAYADNEL QVPISGFLSE HGQFYEQDAS 
STPDSKGQRF KFLRAVRPRG GLKSKISADS SGSERFHVTG SPGTKLLDKD DPSGFDSSEI 
RNAFLRLFVS IFQSYRHYLD KNGFRSEAFI DSLNCSERSS EFLHCVVKTQ FFSRFLDERI 
QNPSDPEIRF FDESIIAKIN RSKKQTFSKI GRGGGKRETS FLKDDSNMVN ETFTPPPPSN 
WGLPDDGRTY HYGSFPALNP ELFGKVRRPM KWPRYDQRSS VRTSRRISAL AQANEKAFVA 
RALKPVSKTP KMLMAETKRG VKNLDTALSA LSSPFVPSSP MRETNRERRA TGSSDFSMSD 
ISLSSALVMR DDIVSTAEGV VLNARRKQAI LLGIIIKLQT HCRLHLVLKK DHQRESFRVS 
AEGDRSNLET NAIICLQKWY RVLSVGRSTR EWFRKLRFAT CRMQSLTRDR MVRAGFLLLV 
TAICRAQARI RGFQTRKIVA SIVEHRLRTY REHIFLLWKA SHTPLSYRCK FWPILKVESY 
LRVQMAEAEV HRLWSKLNIP LPTSMKNLST EQPKIVKSAS LLRMNFETHW ACIILNIEKP 
ILILDFSQKG NSKVTAGPEA QRINSERVQI YDRISALKLE QQLALFDRFS VPLKGKRKKL 
ALAVSIWHAT KLADESTALM LTLFTELNDS TNINFKAPTK KSLRRFPPSP AITPLKRALW 
AHVALEDRIR LNTLEVARIG LHDIPRLSHK VVGNNAVQTS GKNRLELMRR VLNCGASGVN 
TGETKSLQAR HLFKPPAMFN RSHASKSDSI REVE