| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42940 |
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| Symbol | |
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| ID | 7196773 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1578932 |
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| End bp | 1583368 |
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| Gene Length | 4437 bp |
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| Protein Length | 1337 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177324 |
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| Protein GI | 219111145 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.544378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGAAGTCGGC TGATTAAAGT GAATGGGCTG CTCTGTTTCT GAAAGCTAGA TCGTACAAGT
AGTGCTACTC ATATAGCGAG GTAGTATTGC GTGTTTCATT ATCTTGCCTG ACTAGAAAAC
ATGCCACCGG AGGCAATCCC AGCGCCTGTC GCTTCGCAAA ATTGGAAAAA CATGAACGAA
TCCGACAAAG AACAGATTGA ATGGGGGTAC GTTTGGATGG AACACTGCCG CTTATGCTTC
GTAGATGGAG AAAGTGGAAA TACTGGCGGA AATGTGGCGC TCAAAGAGTG GATTGACGTT
GATGTACTGT ATGATGATGA CTATGATGAA ATGAAATTGT CACACGCCAA TCGTACAGGG
CGTCAGCGAC CTCTTGAAGA TCTTCCAGAA GTCAAAGGTG ACATTGACGA TTCACTGTCA
GCAAAATTTT GTTCCAGATG CAATTTGGTT CTGTATCAGT CGGGACCCAT GGGGAGCAAT
TTGAAGGTAC GACTGAATGA AATACCTCCA TGTCAAGGTA CCACTAAGGA CTTCCTGGGC
ACGGACGAGT GCTCTTGTAT AGTGTCAAGG TCTGACGCGT GCTTGATAAT GGGTGTAATG
AGAACATGTG CTAGTGTAGC GCGTGTCCAG CATTGCTCAA TATTGCGGGA AAGTGATAGT
CAGGAACCGA CTTTTACCTT GGTCATATCG GTAGCCTTTC CGCATTTACT ACATGGACCA
GGTGGCCGTC GAAACATTAT GGCTCTGAAA GATTACAGAC GGGCTTACAA ACCCCTTCAC
ACGACAACAC AACTGATACT ATCGATACTC CGCTCCGACT GGAAAAACTT GATATCGATG
ATGGAAAAAA TGCGACTCGC CCCCACAATC AAAGTAGAAA ATCGTCGAGT ACCACGGTTC
TTTCCCAACA GGCTTGGTCT GGACGAGTTA TACGAACGAA TTCAGGGTAC TGCCGCAACC
CACATGATGC TCGAAACTCG TCGAGAAGAT CAGCTGCGAA ATCAACGTAA CGACTGTTTG
ATAGTCCAGT TGCCAAAGGA TGTATTCACT GATTACCTTG CCCCGTTTTT GAAGCCCCGT
TCGTTAGATG CCCTTCGTTG CTCTTGCTCA TACCTACACA ACACATTACG AGCGGTCGTC
CCAGGTCTAA AATTACGATT ATACAGCCAC CAAGTGTCTT CTCTCATTTG GATGCGAAAT
CGTGAGACCA ATTTACTTTC GGAGAAGGAT TGCCTTAGTA CCACACCCTT GCCGGACTCT
CCTGATAGAG ACTTGCACCG AATGGTCACT GGTGGATACA CGACATTGTT ACGATCACGT
TGCCCTTTGA GTGATTTAAG CATCCGTATT GATCAAAAGA CAGGCTTCGA AATTGTCCCG
AAGGACCTTA CCACTTTACC CAGAACTGTG GCGAGAGGTG GTCTCTTATG TGACGACCCA
GGACTTGGGA AAACCGTTAC AGTTTTATCA CTGATTATGC AAACAGCGGG ACTCTCGACG
AAAGCGAATG ACACTGTAGA TACATCCGTT AGTAAGCAGT TGATGCCGAT GGAGGAAGCA
ATATTCCGAA CGTATTGGAG CGAACAAATG ACCCCTGAAT TTCGTCGTCC ACTCTTGCAC
CGCTTTCTGA ATGCTTTCAT ACGGCAAAGC CCCGGAGGTT TCATTGGTCA AGCTGATCAA
GTCAAGAGAA ACATCGATCT AGACAAGTAC GATTTGAATT TTTCATTGTT TGAAAGAGAT
ATGACGTAAG CTTTGTCGGA CCGCTTTTGA ATTCGAAAGC TGTGAGCTGG ATCTTACTGC
TTGTTTCCTC TACTTTCTCA GGGAAGCCAT TTTCCCACAA ACTTGGGAAG GTAAACATGA
AGATAACGAT AGCGATACTC ATGTATACCG AAACGCGGCA CGCCAGCTTA AAAGCGAGTT
TCTGGCTAAT GTTGAGGAAT TTAAGCAAAC TCAACTTCAG TCAGCGCGCA AATCCTTCTC
TTCAGTTTCG GCAAAGCCAA ATTCACGAGT CGCGGCTTTG CTGGATCGGT CGGAACAAAT
GAAATTTGTG GATTCGCTGG TCTCGTCCTC AGCAACACTG TTGGTAGTCC CGGCAGTGTT
GTTGGACCAT TGGCAGGTAA GGTTGTTTGG GCACAGCATT TCTTTTTCAC AAGGCTGAAG
TCTCATGTTT CATGTTTTGA CTCCCGTTAC ATCAGGCTCA AATCGATTTG AACTTGGACC
TTAGCTATTG CACTGATAAG ATACCATTAA TTTTTGAGTT TGGGAGAAAG CACAAAGGTT
TAACAATGGA AGCCGTATGC GCCATTTGCA AAGACAATGG AAGTCACTTT CCCATGGTTT
TTATAGATAG AGGTGGTACA AAGAAGTTGC CGGCGCCGGA GTTTCTTGCA ATGTTTCAAA
TTGTGATAAC AACGACACAG CGCTTTTCGC AGGAATGGAG GAATGGTTCT TTTCAAGCGG
AACTCAAGAG CAGCGGTTGC AAGGAAGTAT CAAAGTTGTA CCTTGATTCA GCTTTTGATC
GATCTGAGAG TGCGTGTCCG CTACTAAAGA TCCACTGGCT TCGAATGATC GTTGACGAAG
GACATTCAAT GGCGAAGAAC CAGAACTCGA CGATTCAGTT TGCATCGTGG ATTTCTGCTG
AAAGAAGATG GGCGATGACC GGGACTCCAA CAAAACAATC CGCGACCCAG ATTCAGCAGA
TCTACGCTAT GCTCCGCTTC CTTGGTCATG GTTTTTTCAC TCCTAGACTC GATGGAAACG
CGGTTTGGAC GTCAAACGTT GCCCGGTGTT GGAAAGAGGG ATCGTTCGCA GCGTTTTTCC
GACTCAGATC GTTGTTGGGT TTGCTTATGA AACGTCATAC AAAACGTGAT ATTGCAGAGC
TGGAGTTGCC GTGTTGCTCA GCAGAGGTGA TTCCGATGAG TTTTGTTGAA GTAACGACTT
ACAATACGTT GGTATGTGGT GTCCAATCAA ACATTTTGTT AACGTCAATG AGCGGGAAGA
CGTCTGGACT GCAGGATTCT CTTCTTCACC GCTCTCAGGT TCAGCATGCT CGTGCTGCAC
TTAGTAACCT ACGTCGTGTT TGTGTCGGCT ACTCCAGAGT ATTACCGACG CTTGAGACAA
GGTTTTACAT TGAGACTATG GTCCTGCTGA AAGAGCATGG AAGGGATGAC AGACAAATTC
AAAATGTGAA GGAATACCTC CACCGCGCCG AAGCTCAAGA GCTCTCAGAA TGCGATTGCT
GCCAGATCAA GCTCAGCACG CTTCTCCTCT TTCCATGCTG TGGCGGATTC TTGTGCCCAG
AATGCATGGA CGAGAAATCA AATATCTGCG TCCTTTGTGA CCAAGATTTC GACGTGGACG
AATTTCAACG ATTGCAGCCA GGTTTCTCGC TAAAGTGGCT CGAAACGATG ATTGAAAGTG
AACAACGCAA ACCGAAACCA TCTATTTCCA ATGCCAACGT GCAAGTCGAT CCTCCAGGTG
GCGCGGATCC AATCGTGCGT GCCGAGATTG AACTCCCAAA CGGAGTTTTG GTTCGGCCGA
ATATGGAGCT CCGTAGAACT CGAAGATTAG GGGATGGTCA CGAATGTCAA TATGATCGGT
ATACTGTCCA TGGAAAATGC ATTCTGTGCT TGTCCGAACA CAGCTTCTGT AACCTATTTA
ATGACAATGC ACAATGTGCG ATCTGCTTCC GGGCAGCTGA GGAGTGCTCG GAGGAGGAAT
CAAAATCCTT TTATCTTGTG AAGAAGCTCT CTGAATTACA TCAACAATTA CGCAACAACG
AGCAGCGACG TCCTCTGAAA ATTATCGTCT TTTCGCAATT TCGCCAAGCT TTGAACATGG
CTGGGAACCG TCTTTTGCGT AAGTTTGGAA CTGCATGCAT TGCTGAATAT TGGGGCAGCT
TTCGCACGAC TGAACTGCGG AAATTTACGT ACGACCGAGA TTGTTTCTGC ATGCTTCTAG
GAAGAGACGG CAGCGAAGGA TTGGACTTGA GCTTTGTCAC GCATATATTC TTTCTCGAGG
AAATCATGGA CCAGTCGCTT CGTGACCAAG CAATTGCTCG AGCCTGGCGG ATGGGCGCAA
AAGGACGTGT GCGGGTGGTA ACTTTGACCG CGGCAAAAAC AGTAGAGGAG ACCATGCAAG
AGATTGAGTC AGCAGCTCAA TACCGTTTCC AGTACTCGCA TCAAACTGTC ACACGCCCTA
TTGTTGCAGC AGCCGAGTCA AACAATTTAG AGGAGTACGC CACGGCAAAG ACACATGCAT
TGCTTCGTTC CTTACGACTC ATTACTGACT ACCACCATTT TTCGGCGGAG CCGCGAACAT
CGACCGCAGA AAAAGCCACC TGTTTGAATA ACAAGCTACC CGGGATTTCG AAAGAAAGCG
ACAAAACTGT TGACAACCCT CCAGTTAAGA GACGAAAAGT AACTTTCACG TAGCGAT
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| Protein sequence | MPPEAIPAPV ASQNWKNMNE SDKEQIEWGY VWMEHCRLCF VDGESGNTGG NVALKEWIDV
DVLYDDDYDE MKLSHANRTG RQRPLEDLPE VKGDIDDSLS AKFCSRCNLV LYQSGPMGSN
LKHCSILRES DSQEPTFTLV ISVAFPHLLH GPGGRRNIMA LKDYRRAYKP LHTTTQLILS
ILRSDWKNLI SMMEKMRLAP TIKVENRRVP RFFPNRLGLD ELYERIQGTA ATHMMLETRR
EDQLRNQRND CLIVQLPKDV FTDYLAPFLK PRSLDALRCS CSYLHNTLRA VVPGLKLRLY
SHQVSSLIWM RNRETNLLSE KDCLSTTPLP DSPDRDLHRM VTGGYTTLLR SRCPLSDLSI
RIDQKTGFEI VPKDLTTLPR TVARGGLLCD DPGLGKTVTV LSLIMQTAGL STKANDTVDT
SVSKQLMPME EAIFRTYWSE QMTPEFRRPL LHRFLNAFIR QSPGGFIGQA DQVKRNIDLD
KYDLNFSLFE RDMTEAIFPQ TWEGKHEDND SDTHVYRNAA RQLKSEFLAN VEEFKQTQLQ
SARKSFSSVS AKPNSRVAAL LDRSEQMKFV DSLVSSSATL LVVPAVLLDH WQAQIDLNLD
LSYCTDKIPL IFEFGRKHKG LTMEAVCAIC KDNGSHFPMV FIDRGGTKKL PAPEFLAMFQ
IVITTTQRFS QEWRNGSFQA ELKSSGCKEV SKLYLDSAFD RSESACPLLK IHWLRMIVDE
GHSMAKNQNS TIQFASWISA ERRWAMTGTP TKQSATQIQQ IYAMLRFLGH GFFTPRLDGN
AVWTSNVARC WKEGSFAAFF RLRSLLGLLM KRHTKRDIAE LELPCCSAEV IPMSFVEVTT
YNTLVCGVQS NILLTSMSGK TSGLQDSLLH RSQVQHARAA LSNLRRVCVG YSRVLPTLET
RFYIETMVLL KEHGRDDRQI QNVKEYLHRA EAQELSECDC CQIKLSTLLL FPCCGGFLCP
ECMDEKSNIC VLCDQDFDVD EFQRLQPGFS LKWLETMIES EQRKPKPSIS NANVQVDPPG
GADPIVRAEI ELPNGVLVRP NMELRRTRRL GDGHECQYDR YTVHGKCILC LSEHSFCNLF
NDNAQCAICF RAAEECSEEE SKSFYLVKKL SELHQQLRNN EQRRPLKIIV FSQFRQALNM
AGNRLLRKFG TACIAEYWGS FRTTELRKFT YDRDCFCMLL GRDGSEGLDL SFVTHIFFLE
EIMDQSLRDQ AIARAWRMGA KGRVRVVTLT AAKTVEETMQ EIESAAQYRF QYSHQTVTRP
IVAAAESNNL EEYATAKTHA LLRSLRLITD YHHFSAEPRT STAEKATCLN NKLPGISKES
DKTVDNPPVK RRKVTFT
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