| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42917 |
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| Symbol | |
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| ID | 7196180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1514249 |
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| End bp | 1515988 |
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| Gene Length | 1740 bp |
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| Protein Length | 509 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177307 |
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| Protein GI | 219111111 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCACTGATCG GTCCAGCGCC CACGTTAGCT TATAAGATAA GCAGCCCTGG CATTCTACAC
ACCCAAAATT TGGGAGCTGT TCTAAGATAA CGTGGCTTCC GTGCGACTGC TATCTACCTT
TGCTTGTGTA ATGGTGCTTT GGGGAGGGCT CCGGCCAATT CTCTCTCGCG TTCTACTTGA
CTCGGCCGCC CTGTTTGGCC TAAGCGTATC GGCAGGAACT TCGGAGTGTA CACGAAAAAA
CACCGTCGTT CTGGGACTGA CATACATTGG AACTTTTGTT TCGGCCGGGC CCACAAATCG
TTGGACTTTG ACACTACCAA TGGTACCATT TCTGTTTTTA CAGCTAACGA GACGATTATC
TCTCTCCAAG AAAGGCGGAT GCTGGTTTCA CCGAATTGTC GATGGGTTGA GTCTATTACT
GATCGTGTCA GCCGCTACTT TATCGATACT CTTTCCAGCT GTAGAGCTTC CTGCAATCAA
AGGTCCCTAC AATGTAGGCG TGGTAGATTT TTTTATGCCA ATAGAATCGT CCAATATCGC
AGGGAGTGTT TCAAGAGAGA CCTGTGCTTC ATCTTCTCAC GTTTCGGTGC GATTACTTTA
TCCTACCAAC GAAAAACCCG TACGGATACC ATTTTTAAGA CCTGACATTG CAGCTGATTA
CTGTCAACAA TTTATGAGCT TTGGAGCCCC TCCGCCTTTG AAAACGTTTG GTTGGCTGCT
ACACACGTGG CGTCTAGCAC GAATGCAAGC CAAACCCCAC GCTTCGCTTT CAGATCATCC
TGACGCCTTC CCTCTAGTTT TATTCTCTCA CGGTCTTGGA GGCACAGCAG AAATTTACAG
TTACCAAACC ATGTCTCTTG TGGCGCACGG TCACATTGTG TTGGCTGTGA ACCACCAAGA
TGGAAGTGCT CCAGTCATAA GGCAAAGAGA CGGGAACATT AAGCTGTACG ATCACGAACT
TCCGAAACTC TGGGCTGGAG GCAACCATGT CGAGTATGTT CGTGAACGTC GTGCACGAAC
TGATCTTCGT GTGGACGAGT TGGTGGCAGC TGCGGAAGGT ATGCATAGAT TGAATGAGAG
TGACCTGGCC GAACTCCTAC TGTTCGGTCT CTCCTTCCGT GATCGCATCC AGATAGATCA
AACATTTTTT ATGGGGCATT CCTTTGGAGG AGCAACGGCG CTGTCAGTGG CAAAGCGGCG
ACCTGATCTT GTAAAGTCCG TGATTGCACA CGAGCCAGCC GTTGACTGGA TGCCTGATGA
TGCTCGTCGC TCGTTGTTCG ATCTAAAACG ATTAGAAGGA CTTTCAACTA ACTTCACGGG
AGGGACCGGA GGTTTTCTTG TCGAATCTTC AGACTCAGAA TCATCTATTC ACGATGTGGA
CCTGCTTATA CTTTTCTCGG GCGAATGGCG ATCGAAGAAA TGGGGTTGGA ACCATGTTCT
AGAAGAGATG CATCAGGAAG CTCGGTTGGG TCGGGAAGGA GGCTACTCTT CCTTTGCTTT
TATAGATGAT GCACACCATA CAGAGTTTTC AGACACTTCC ATGATGTTGC CGTTATGGCT
GGCACGTCTT ACCAATATAA CAGGGCCAAG GAGTCCCTTG TCGACGGCGA AAGAGATTCA
TGAGCGAACC TTGGTGTTCA TGCAAAAAGT CAATCTATAG GGACACGTTG ACTGTAAGAA
ACCATCAAAG CTCTAAGTTT GAAACTGTTT ACAATACAGA ATGACGGTGA ACTGTTTCCT
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| Protein sequence | MVLWGGLRPI LSRVLLDSAA LFGLSVSAGT SECTRKNTVV LGLTYIGTFV SAGPTNRWTL
TLPMVPFLFL QLTRRLSLSK KGGCWFHRIV DGLSLLLIVS AATLSILFPA VELPAIKGPY
NVGVVDFFMP IESSNIAGSV SRETCASSSH VSVRLLYPTN EKPVRIPFLR PDIAADYCQQ
FMSFGAPPPL KTFGWLLHTW RLARMQAKPH ASLSDHPDAF PLVLFSHGLG GTAEIYSYQT
MSLVAHGHIV LAVNHQDGSA PVIRQRDGNI KLYDHELPKL WAGGNHVEYV RERRARTDLR
VDELVAAAEG MHRLNESDLA ELLLFGLSFR DRIQIDQTFF MGHSFGGATA LSVAKRRPDL
VKSVIAHEPA VDWMPDDARR SLFDLKRLEG LSTNFTGGTG GFLVESSDSE SSIHDVDLLI
LFSGEWRSKK WGWNHVLEEM HQEARLGREG GYSSFAFIDD AHHTEFSDTS MMLPLWLARL
TNITGPRSPL STAKEIHERT LVFMQKVNL
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