| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42888 |
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| Symbol | |
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| ID | 7196466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1422491 |
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| End bp | 1424331 |
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| Gene Length | 1841 bp |
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| Protein Length | 564 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176786 |
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| Protein GI | 219110068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0590475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGCTTGTACT CTGTGGGGTG CGGCGCTATA ATGTCCATGG CAGTGACGGC AGAGCCCATG
GAAAGTCGGT CCGAGTCTTC GGCGGATCAT GCTGCAGGCG AGGGTTTCTT GGGTGTGTTT
GATCGCGAAG AACCAGACCC TGCGGTGGAG ACACTTGCGA ATCCGGATGA CGATACAATT
TCGGAAGAAC TCGCAGGCTC CTTGGTTCGC GTAGGGACAA CGGCGTCGGC TCGATTTAAC
ATATTATCCA CCATGGTGGG TGGAGGGTCA TTGTCCCTCC CTATGGCGTT TCAAAAGGCT
GGGAATGGAC TCCTCGGTCC CGTTATCCTG ATCGTGGTAG CTACCGTGAC AGAGTTCTGT
TTCCGCATCT TGGTAGATTC AGCACGACGG CTAAGTCCCG TTTCTGCAAG CTCCGTAACT
CCCGGTAAAG ACTCGTTCGA GTTGATTGCC AGTGCGGCGT TTGGTCGGCG GGCATATGTC
GGATCCATGA TACTGGTAAC CTTTATGTGT TTTTTTGGTA CCATTGGATA CGCAGTCCTA
CTGCGAGACA TGTTAGAACC TGTCACGTTT ATGATCTTTC CATCCCATGC GTCATTTTCT
AATACCACCC GGGTATACGA ATCCCAGTGG GAGAGTGTCG GGCGTGGGAG CCAGGTCGGT
GGTAGTGACG GGCCGTCTTG GCGGAACAAT GCGACCATGT TGATTGTTGT TTTGCTGGTA
ACCCCGCTGT GTACGTTGCG GACACTGACT GCCCTAAAGC GGTTTGGTGC CGCATCCATG
GTCAGCGTTT TGATCTTGGG ACTCTGCGTG GTGTATCGAT CGATTGAATG CAATCTCGGA
TACGTGGACG GCAACCACGA TTACAAATTT TGGCATTCTT TTCAACTGTG GCCTGATTCC
TGGAAAAATG TGTTGGACGC CTTTCCACTC TTTGTCTCGT GTTTTGTATG TCACTACAAT
ATTCTTACCG TACACAACGA GTTACGTGTT CCGAGCCACC AACGAGTTTC GTGGTGGTTG
CGGTCCACCA CTTGGATGGC CGCAGCGTTT TATCTCCTCA TCGGTCTTGC TGGATCAGCC
TACGCACACT GCACAATCGA CGGTAAAATC CACGGGAACG TCCTTTTAGA CTTTCCCAAG
GACGATCCAC TCTTGTTGGT GGGACGCATG TGCTTGGCCT TGACAATAAC CTTGGCCTTT
CCAATGTTGA CCATTCCAGC CCGGGATATT GTGATTCGAT CATTGCCTTC GCTGCTCAAA
CATGATCAAC AATCGAATGG TGCAGACAAT GGTGAATCAA ACTTAGTGGA ACAGTCGTTA
CGACAGTCAC TCCTCGAAAA CGTTCATTCG GACGACGAAG CGGTTGGCTT AGTACCGCAT
TCGTCGCTGT CCTCGGAACA ACCGTCCGGC AAAGGAGCAT CTTTCTGGCT ACGGCTAGTC
GTTGCTATGG CTTTGTTCTG GACCGCGGCC GGAGTCGCAA GTTGTGTCAG TAGCATCGAT
ATTGTGTGGA ATTTACTGGG CAGTAGTCTT TCCATGCTTT TGTCTTATAT TATCCCCTGT
TCATCCTACC TCACGATTAT TCACACCGAG GAGAATGGAG GGACCAGTGA GCGTCCCAGT
CGGTTTGTCC TGGCGACAGC ATGGGTGCTG TTGTTGGTGG CCTCCCCGCT AATGATCTTG
TCGACCGCCA ACGCGGTCTA CAGTACTTTC TTTTCGAACG TATAGGGGCT GCAACTGCGG
CATAGACAGC GATGATGATG ATATTCAAAC TTCGCGTTGA GGAACGTAGA GACGAAAAAA
ATGTGACATA AGGGCATGCG TATAGTTTCA CAACAAATTA G
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| Protein sequence | MSMAVTAEPM ESRSESSADH AAGEGFLGVF DREEPDPAVE TLANPDDDTI SEELAGSLVR
VGTTASARFN ILSTMVGGGS LSLPMAFQKA GNGLLGPVIL IVVATVTEFC FRILVDSARR
LSPVSASSVT PGKDSFELIA SAAFGRRAYV GSMILVTFMC FFGTIGYAVL LRDMLEPVTF
MIFPSHASFS NTTRVYESQW ESVGRGSQVG GSDGPSWRNN ATMLIVVLLV TPLCTLRTLT
ALKRFGAASM VSVLILGLCV VYRSIECNLG YVDGNHDYKF WHSFQLWPDS WKNVLDAFPL
FVSCFVCHYN ILTVHNELRV PSHQRVSWWL RSTTWMAAAF YLLIGLAGSA YAHCTIDGKI
HGNVLLDFPK DDPLLLVGRM CLALTITLAF PMLTIPARDI VIRSLPSLLK HDQQSNGADN
GESNLVEQSL RQSLLENVHS DDEAVGLVPH SSLSSEQPSG KGASFWLRLV VAMALFWTAA
GVASCVSSID IVWNLLGSSL SMLLSYIIPC SSYLTIIHTE ENGGTSERPS RFVLATAWVL
LLVASPLMIL STANAVYSTF FSNV
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