| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42887 |
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| Symbol | |
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| ID | 7196528 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1419979 |
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| End bp | 1421835 |
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| Gene Length | 1857 bp |
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| Protein Length | 374 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176785 |
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| Protein GI | 219110066 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0365267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGATGCTGTA CATGTAAATA CCAAATTCGT GAACCTAGTT TCGGAAAGTG GCTTAAAAGT
TATATGTGAC CATAAAATTG AAATCGAGCT AAAAAAGTTT ATTTCGACGA GGAGATATGT
GCTCACTGTA AAAGACACCT GAGCTTGATA CCACTGCCGG ATTAATTGTG TGCCAGAAAT
TCCCATGTAT ACCAGTGTTC GCATTACTTT GTTGAGCTGA AACAAAGCTT CCGCGAAACC
TGTACTGATT GAGAATTGGA ATTGTTTCCA CAAGATGATG ATGAGCTTGA GAAGTCTGGT
AAGTGTAATT GCAATCGCGT TCACATTGGG AATCGGGATG TACAATGGCG TGCACGATAT
GAGTCATGTG GTCGAGACTT TGTCGTCGAT TGAGAAAGAG CTAAATCCCT TGCAGCCCAT
GACGGGATCG GAGCAAAGCA AGATCGTTAG CATGCCTTAC AAAAACTGGA GGAAAGACAT
TATACGGGAA CCAATTCCTC GACCATCAGC TAAAGCTCTT TTCGACGGAT CAAATGTAAC
GGGCGACGTA TCGTGGCTCC TAAATCTGGC TATTATAGGA TTCGGCAAAT GTGGCACCTC
GTCTATGGTA GGCCATTTCA GCCAACACAA ACAAATATCC ATGATGCACA GAGAGCACTG
CGAGTTTACA TGGCGTGACG ACGACACCAT TCTTCTTAAA GCCCTGGAGT CGGAGCTTCC
ACATGGCAAC TATATGCGTG GGCTGAAGTG CCCCAGTCTC GTGAGAAGCC CTTTGGGAAT
GCAACGGTTA GCCAAGTATT TTCCGAACGT TCGACTCATC GTTGGAGTTC GGCATCCAAT
CCTTTGGTAA GTCATTGTTG ATGGAACAAA TTGATTCTTA CTTGTCAGCT AACCTGGGTT
TTGGTATACC TGGACAGGTT CGAATCTTTG TACAACTGCA AGTATATTTT TTTCAGTGTC
TAGTAAACTG TCTTTCCCAA TCGCTGTACC TTTCTGCTCA CCATCAACAA TACTTGTTAC
TCTACAGTTC GCCAGAGACA GTTTGGATAC AGCCTCTTCC CAGCCCACAA ATTGATTGGC
AAATGCCAGG ATTTGGGACC CAATAAAAAG GTGCACGGTG TATGTACAGA AGAAGCGAGA
TTTCAAGAAG CATTAATTGG CTTGGGAAAG ACTAGCATGA GTACAACGGA CGAAATGCAG
TACTTTTTAT CCTCTGAAAA GAAACCTGAG AATCTTACCG TTATCTCTCA AATGAAAGTA
TTTGTCTACG ACATAGCGCA GGTAGAGGAT AAAGACGAGG AACGCTCCCA ACTGTTTATG
GACGACATGC AAACATTCCT CCAGATGACG GAGCCTTTCA AGCCGATGGG TCAAAAAAGC
GGCGGGAAAA CGAAGCAGTC GCGCATTGAC ATTTGCGAGC AAAAGTACGA CCATTTGCGC
GAGGCTCTCT TGGACATTGG GGTGAATGCA TCGAGGTGGA TCCGTCGCTT TTTCGTACCT
GCCGAGGGTG TGACCGTCTC ATCACCCAAA TTTTTCGAGC AGTCGTTGGC GAAGTGGGAA
ATCGATCCGT GCGAAGAACG CCGAGCAAAT AACACATTCC CTCCCAAATG ATTTGATTGT
GTCATTATCC CGACAATTTG GTTGTAAACT CTAGGCTGCT TGTCAAAGCA ACATGGAAAA
TAGCCAAGAA GCCATTGTCG ACAAATTGGG ATGCCCAGGA TCACGCACCT ATGCAGTGCA
CAGATAAGGT TTCTGAAAGG GGGAAAACGG ACAGCACCAT CACTCTCGAC ATTCGTGTGT
ATGGGTTGGT ATTTACAGTT CAATAATTTA CACCGCAATC TTAAAGTTAA TTTTTTT
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| Protein sequence | MMMSLRSLVS VIAIAFTLGI GMYNGVHDMS HVVETLSSIE KELNPLQPMT GSEQSKIVSM
PYKNWRKDII REPIPRPSAK ALFDGSNVTG DVSWLLNLAI IGFGKCGTSS MVGHFSQHKQ
ISMMHREHCE FTWRDDDTIL LKALESELPH GNYMRGLKCP SLPSIFRTFD SSLEFGIQSF
VRQRQFGYSL FPAHKLIGKC QDLGPNKKVH GVCTEEARFQ EALIGLGKTS MSTTDEMQYF
LSSEKKPENL TVISQMKVFV YDIAQVEDKD EERSQLFMDD MQTFLQMTEP FKPMGQKSGG
KTKQSRIDIC EQKYDHLREA LLDIGVNASR WIRRFFVPAE GVTVSSPKFF EQSLAKWEID
PCEERRANNT FPPK
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