| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42872 |
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| Symbol | |
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| ID | 7196518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1375651 |
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| End bp | 1378494 |
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| Gene Length | 2844 bp |
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| Protein Length | 808 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176772 |
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| Protein GI | 219110040 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCGTTCGCTG CCTTTTGGGT TGTTCTCACC CTCCGATCAG TGCGTTTGGT GATTCCCGCA
GCGTCCCACT AACTACTAAC TTACTCGTAT CGTCTTGGGA GCCAACAAAT CATGATTGCC
AGTCTCAAAT GTACGTGTGT GTCTAGACAT TCTACCTGTA TACAATGATA ACCTCCAATG
ATATCGGAAA TGAAAAAAGT GTTTGGTGTG GAAAACGGAG GGAGGGTTTT GGTTTCGACA
CCCCCCGCGT CCGATGCCGG AGATGCGTTC CCGAATCTTG GAAGGCACAG CGTGTCGGTC
TTTGCCAAAC ACGCTTCTCG ACACCGCATC CGTACCCACC GTTTACACAA TGACGGTCGA
TTCATTCACC GTCAATATGG AAGACTACCC ACCCCACTCT CTGTTGGGTC TGTCTGCTCT
TTCCTTTTCC TCGTTGGGAA GGAATCCTGG GACACCGTTT GTTTGTGTAG ATCTACGCCG
TGCGTGCTTG GGGAATATTC TCTACTCACC TCGTGTTTTT TTCTTTTTCT CTATTGATTT
ACCTTTTACA GCACGTTCCT TCGACGACGT AATGGACACG GTTACCCGCG CGGGCATGGA
AGCCCTTGGT CGTCTCGACT ACAAGTCTCC CTACGCCCTC ACAGCCGTCG GTCTCGTCGG
AGCCTTTAGT CTCCGCAACG TCCTGCAGAA AAAGTTCGCC AACCTCATTG ACACCATCTG
CAACCGCACC TACATTTACA ACATTTGCTG GGAAGATCCC GCCGTCGACC ACGAGATCCT
CAAGATTCAA CCGGACGACG TCATTTTCCG CATTTGCAGT GCCGGGGATA TCGTGCTCGA
TTACGCCATT GAAGGACCCG CCAAAATTGT GGTCTGCGAC ATGAATCAGC ACCAACTATG
GTTGTTTGAA CTCAAAATAC GCATGCTCCG TGACCCCCAC CTCACCTACG ACGAATGGTG
GGCCATCTGG GGCAGTTCCG ACGTACTCGT CGCCATGAAG GTCTGGAAAC GTATGCGTCA
CACCATGAGT GCCGGGGGAC GAGTTTGGTG GGACGGACGG ATCGAACGCG TCTTCCGCAA
CGGATACGCA ACCTCCGGAT CTTGTGGATT CGCCGCCAAA CATCTCATCC CCTGGCTCAT
GTGGGTAGTA GGATTCGATG TCAAGGCCTG GGCCGATACC GGATTTTCAC ACGCTTACAT
TTCCGAGAAT TCTCATATTA TCGAAAATTC CGCCTGGTGG TTCCGGCGCA TCTTCCCCGG
TATTCTGGCT CCCTTTGCCG GGGTACCGCC CAACCAGATT GGACCCGAAT TCTACACCAC
GGAGTTCTAC GAAGGAATCT TGCGGGAAAT CTTTCTGGAT CCCGATTTCG GCAAGGACAA
CTACTTTTAC CGCTTTTATT ACGAAAAGGG GTATAAGGAC CAGACCTGCT GTCCACGAAC
ACTCAAACCA CAGTACTTTG ACGCCCTCCG CGCCAATGCT GGTTGTTTCG AATGGCACCA
CGCAACGGTG CAAGAAACCA TGGAACGCGT CAAGCCGTAC TCCTTCACCA AGCTCGTCCT
GCTCGATCAC ATGGACTGGA TGCCCAACAG CCTCGTTCAC GAAGAATGGA TTGCCCTACA
GCGTTCCACC GTCCCCGGTG CCAAGGTCTT GTGGCGATCG GCCTTTACCA AAATGGACGA
AAAACCGTTC TTCAACAATC TCGATATTAC TGATCTGAGC CCCGAGTGGT ACCACAAGGA
CAGGGTTAAA ATGTACCCCG GCACGTTCTC GTGCCTCATG CCGGCAGATC CTTTCCCCTT
TGTCGATCCC GAACCATCGC CCTGTCAACG AGCCACTTTT ACCCGCAAAC TCAAAACCAC
CACCAAGATG ATTCTTCATC CTCTAACGGC CGGACGCGTC AACGCGCACG GCGACAAGAT
GAGTTCCTTT TACGCTTCGC AAGCCAAGGG TTACGACGCG GTCCGTGAAA ACATGCTGGT
TTCTCGACCG GAAATGATGT CCGGCTTTGG TCCCATCAAG AAAGGTCACA CGTGGTTGGA
TGTGGGTGGT GGTACCGGGC GAAATCTGCA CTATCTTCGG GCACAGTTGG ATTTGTTCGA
ACGCATCGTT GTACTCGATA TTTGTCCTGA ACTGCTCGCC ATTGGTGAAG AAAACGCCCG
ACTTTCCTTC ACCCCCGCAC AGACTGCCAA GATTTCGTGG GTTGTTCTGG ACATTAACGA
CAAAGACGTC CGCTCTATCC TCGCCAAGCA CTTGCACAAC GACTTGCAGC GTGGATTCGA
TACTATTTCG TTTTCATACT CGCTCAGTAT GATTCCGGCG TGGGAGCAGG CCCTGCTTTC
CGCACGCAGT CTCATGTCGG CCGACGGTCG CGTCATTGTT TCAGATTTTG ATACGTACAC
GGAGGCGGGC AAGTCCTTTA AAGACTTTTT GATTCGCACC TGGTACCGAC AAGACGGCGT
ACGCATCGAA TCCAAATCGC GAGATTTCAT TGCGAATAAC GTGTTCGGCG GTACCAACTT
TGCCGTTACC ATGGCCCGTT TCCAACGCAA GCTGGGTGGC GTCAAGATTC CCCACTACGT
CGCGTGTTGT CGGAAGGAAA CCGTGACCGA GTCGGACGGC AAGCGTCGTC CGTCCGCGAT
TGATTTGACC GCACTGGGCG AAGAAAAAAA GACGGACTAG CACTGTTGAC AAACGTATGC
ACTTTGAATC CAACGCACGC GCATACTAAT GTCTCGCATG CATTCCCTTT TCGGGGCCGC
CTCGGTACTG CCATGTTTTA CAACCAGAAG AGATACTCTC GTAGACGATT AAAAGCTAGT
AGTAGATGTG AACATTGCTT GTTT
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| Protein sequence | MPEMRSRILE GTACRSLPNT LLDTASVPTV YTMTVDSFTV NMEDYPPHSL LGLSALSFSS
LGRNPGTPFV CVDLRRACLG NILYSPRVFF FFSIDLPFTA RSFDDVMDTV TRAGMEALGR
LDYKSPYALT AVGLVGAFSL RNVLQKKFAN LIDTICNRTY IYNICWEDPA VDHEILKIQP
DDVIFRICSA GDIVLDYAIE GPAKIVVCDM NQHQLWLFEL KIRMLRDPHL TYDEWWAIWG
SSDVLVAMKV WKRMRHTMSA GGRVWWDGRI ERVFRNGYAT SGSCGFAAKH LIPWLMWVVG
FDVKAWADTG FSHAYISENS HIIENSAWWF RRIFPGILAP FAGVPPNQIG PEFYTTEFYE
GILREIFLDP DFGKDNYFYR FYYEKGYKDQ TCCPRTLKPQ YFDALRANAG CFEWHHATVQ
ETMERVKPYS FTKLVLLDHM DWMPNSLVHE EWIALQRSTV PGAKVLWRSA FTKMDEKPFF
NNLDITDLSP EWYHKDRVKM YPGTFSCLMP ADPFPFVDPE PSPCQRATFT RKLKTTTKMI
LHPLTAGRVN AHGDKMSSFY ASQAKGYDAV RENMLVSRPE MMSGFGPIKK GHTWLDVGGG
TGRNLHYLRA QLDLFERIVV LDICPELLAI GEENARLSFT PAQTAKISWV VLDINDKDVR
SILAKHLHND LQRGFDTISF SYSLSMIPAW EQALLSARSL MSADGRVIVS DFDTYTEAGK
SFKDFLIRTW YRQDGVRIES KSRDFIANNV FGGTNFAVTM ARFQRKLGGV KIPHYVACCR
KETVTESDGK RRPSAIDLTA LGEEKKTD
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