| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42835 |
|---|
| Symbol | |
|---|
| ID | 7196433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | + |
|---|
| Start bp | 1275396 |
|---|
| End bp | 1276559 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002176753 |
|---|
| Protein GI | 219110001 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAAACCTTCA GGCGTTTTCG CAAAGTTCTC TTGAAAGCAA TCATTATGAA GACGCCTTTG
CTACTTTTAT CGATTTGGAG TAGCTTCTTT ATATCAGAAA ATTCGGCGTT CTCTCCGCCT
TTCGTTTCTG TGTTCGGCAA GAAAAGGGAC ACTGAGATAC ACGAATCAAA GCCACTGCAA
CTCAAAGATG TTGTCCAGAA AGTAGCGGTT ACAGGTGCGA CCGGCCGTAC AGGGCGTCTA
GTAGTTGAAG AGCTATTGGA ACGCGAAGTC TCCTCCGTCG TAGCCATAGT CCGTGATACC
AAGAAAGCTG CCGAAATTTT TCCGAATCCT CCCGATAATC TACAGATAGT CCAAGTCGAC
CTCTTCGACG AAAACCAGAT CAAGGTACTC TGTGAGAGCT TGGATGCGGC TATTTGGTGT
GCAACTGGGT TTTCCAGCAA TGCGGATACA TCCCCTCTGG AAAGAATGAA GTCGCTGTTT
GGCATCGCTA CAAAACGTAC AATCGATACT GTCGGTCTAC CTTCATTCGG GAAGTATCTT
TCGGCTGTTC AGGCAACTGG TGGTGAACCT CTTCCAAAAG TGATTCTCTG CAGCTCGGCG
GGGGTAACCA GGCCCATCTG GGATGACGCC AAAAAGCAAA GGTTTCCTGG TGCCGCCAAT
ATTCCAATCG TTCGCCTTAA CCCGTTTGGA ATTCTTGATA TTAAACGTAT GAGCGAAGAA
AAGCTCCGCG ATACAGGTGC CGATTATTGC ATTGTTCGGC CATCAGGATT AAACGATAGC
TGGCCCGCAG GATCACGGCC GATTTTTTCA CAAGGTGATG TCGCAGTGGG ACGTATCAAT
CGTAAGGACG TCGCTAAGGT CCTTGTAGAT GTTCTGACAG CTCCAGAGGC TACGGGGAAA
ACGTTTGAGA CGACGGCAGT TGCAGGCTAC CCCAAGGCGC CTTCCATAGC TCCCGTGCTT
TCACGTCTAC GAAAGGACTC TGAGGGTTTG CCTTCAATGG AACAGATTGA AGGAACCTAC
ACCGCTATGC AGCAGTTACT CCCCGGTGAA CAACAAGATG CTGCTGCATT GGCAATGGGG
CAGACCTATG AGCAGCTTGA TAGAGGCGAA GAAGGACGTC TTGGAAAACG TGGCCAAGAA
AAGCTGTCGC AGATTCGAGA TTAA
|
|---|
| Protein sequence | MKTPLLLLSI WSSFFISENS AFSPPFVSVF GKKRDTEIHE SKPLQLKDVV QKVAVTGATG
RTGRLVVEEL LEREVSSVVA IVRDTKKAAE IFPNPPDNLQ IVQVDLFDEN QIKVLCESLD
AAIWCATGFS SNADTSPLER MKSLFGIATK RTIDTVGLPS FGKYLSAVQA TGGEPLPKVI
LCSSAGVTRP IWDDAKKQRF PGAANIPIVR LNPFGILDIK RMSEEKLRDT GADYCIVRPS
GLNDSWPAGS RPIFSQGDVA VGRINRKDVA KVLVDVLTAP EATGKTFETT AVAGYPKAPS
IAPVLSRLRK DSEGLPSMEQ IEGTYTAMQQ LLPGEQQDAA ALAMGQTYEQ LDRGEEGRLG
KRGQEKLSQI RD
|
|---|
| |