| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42729 |
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| Symbol | |
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| ID | 7196363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 915431 |
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| End bp | 918453 |
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| Gene Length | 3023 bp |
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| Protein Length | 1003 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177189 |
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| Protein GI | 219110875 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGA AAAGGAATGC CAAGAAACGA CGTCGGGAAC AACGCCGCCA GATGGAAGAA
CATTCCAGGC TTACTAATGA TTCCTTCCAG GACCAGCAAA GAGCTACCAG TACGAACAAA
CATTCGAAGG GGGATGGTGC ACCACCATCA TTTGACAAGA GTCGCAGCGT CAATTCATCT
TCTCTCCCTA CAGCAGTGGA TGGCTTCGGT TCCCAAAAGC GTTCCATCGC TGCAATCCAA
TTTGTTTACC CCGAACGGAA TGGAAGAAAA CTTTACAGAT TTCAAAAGGA GCTGCTCGAC
ACCTTCATCG TTCCTCCCCA AGAAAAGATT GAAAAAGGGC TCCCTGAATT CGTCGCGACG
AACGTGAGTT TGAACGACAT TCTATACCCG GACAGCAACA GAGAAAAACA ATCCGATTCT
GGTAGTCAGC TCAAAGGCGA CTCCTCTCAG AAATCTCCAA AAATCCTGCA TGGCGAGCAT
CACACCAACA ACGTAGTAAA GGAGCTGCGT CAGAAGAACT TGGATGTACA GTCACTTTCT
GGGCAATCGC AAGGCCAGCT GTCGGGGATG TCCGTGGAAG ATGCCGTTCG CGACAAACTT
GGATGTCGGC CTCGTGCGAA TTCGACAGAT GGAGAACTCA ATTTACCGCA ACGAGGGCTT
TGTGATGAGC GGAAGGTACT AGAGTCTTTC AAATGGATCC CCACAAATGT CAATTTGTCT
TATCCGAAAG GCTTTGTCAA TCTGGGTAAT ACGTGCTTTC TGAATAGCAC TGTACAGTGC
CTCGCCTACC TACCACCATT CTGCCAATCC TTGCTTTCAA TATTATCTCA TGAATCAAAA
CATGGTGAAA AAAGAAAGAC CAGTCAAGGA AGGAAGGTAA CATTTATCTT GCGCTCCCTC
TTTTCTCAAG TACACGGCAT TGATGGTGGT ACCACACACT CTGGAAGTTC ATTGGCTCCT
CGTGCCATTG TCCAAGCAGT GCCAACTCTT GGTTCCTGCG GTAGTCGGAA AGGGTACAAG
TTTCGACCCG GTCGACAAGA AGATGCACAT GAGTTTTTGG TGCATTTGCT AGATGCCATG
AACGACGGTG AGCTGAAAGA AGCGGGAATC AACCAGAATG CAAGTGGATG GCGTGATCGA
TTGCCAATTC CTCGCCTAGA TGAGACGACT TTCATACATA GAATATTTGG TGGATATTTC
CGAAGTCAAG TTCGCTGCAC ATCCTGTAAC AATCGCAGCA ACACGTACGA TCCCTTACTA
AACTTGTCTC TGGAAGTCAG TCGCAAGGCG TGCAACTCAG TTGCTCAGGC TTTGCACGAG
TTTACTCGCA AGGAAACCTT AGACTCTCAG AATCAGTGGA AGTGTTCGGG CTGCAAAAAA
TATGTTTGTG CTACAAAGCA GTTGACTGTA TTTCGACCAC CTTTGTCTCT TTGCATTCAA
TTAAAGCGAT TCACATACAG CGGTAGACTA AAATTTAGTG TTGGCTTCGG GAGCTTCGGC
AATGGGGGAG GAGGACAAAA GATATCGAAA TCTATCGAGT TTCCAGCCCA GCTGAAGCTT
CCTTTGAGTG ATGGTCGCTC CTGTGGGTAT TCCTTGACCG GAATTGTGAT CCATGTAGGA
GGTAGTGCTA GTTCTGGACA TTACACGGCG TATGTTCGCA AGCCAGGTGG TGGTAGCAAA
TCACAATGGT TTCACATGGA CGACTCTTTC GTCGAAGCTG TATCGGAACA AACAGTCCTT
CGACAAAGAG ATGCCTACTT GCTGTTCTAC TGTCGCGAAG AAGTTAAACT TGAGTTTCCA
ACACCTCCAA TGTCGGCCAA GGAAGCGCAA GAACTTGGCA GAGCCAAAGC TCGCGCCCGC
GCGGACAGTT TAACAGAATT ACAAGCAAGC GCATCGACAT CTTTAATCAC AATCACTAGC
AAGTCGCTTT GCCATGAAAG TACAGCGGCT TTGGAACAGA AAAGGAAGGT TAATAGAGTG
GAGGAGAACT CGAATGGTAC GGTGGCTTCT TTTCCACCAA ATCTGCGAAA GCAGGAACAA
AATGAGAATG GAGACTTGTT GGAGAAACAA CGGAATGAAA CATCCTTTTC AGCCCCAGGC
AAGAAAACTG ACAGCGCCGA ACTACTGCCA ACGCCAATCA CAGCTCCGGA TTTTGGCTTT
GAGATTCAAC GCTCGTCAGT AAAGCAATTT AGCCGTAGGA GTCCGGATCC GTCGAAAGTG
GTAGTTTCCT CGAAATCCCA GCGGGAAAGA TACGGAGGCA ACATTCAGCT CGGACAATCA
CCAATGATGA AACCTGCCAT TGCACTTCCG GATCAAGGCG AAGAATCCTC GTCGGAAGAG
TCCTCACCCA GCGACGATTC TTCCGTACAA GACCAGAACG ACAGCACCAG TTCCGCAAGG
ATTTCTCTGC CGGTTATTAA GTCGGAGGCC AAGACGTCAT TCGCCGACGT TTCTTCCTCG
TCCGAAAACG AAGAAAAAGC GTTTAGGACA ATAAATATGA CAGAATCCGA AAGTCCACAT
GCTGTCCAGA AAAAGGCGTT GGAGAAACCG CGGACTCGCA TCGTGCTTGA TCGTGGTGAA
GGCCGTGAAA AGGTGGAAGT CATGATGGGT CCGCGCTCCG AGACCAAGGC GTGGACGCCC
AGGGCTGGGG CGGTTACAAA AAGTGAGGAC TATGCGCTTT TGGGGAACCA GCGAGTAGGA
AGGTGGGATG ACGAAGGCAA CGATGTTGCA ACTCGCCAAC ATGACCGCGG CCGCGAGAAC
CTTATCCAAC AAATGGACAA GAAAGAATCC AACCGAAAGC GCAAAATGTA CTTAGATCGC
TGGGACGCCA TGCTGGATCA AGGCCAAACC AAAAAGGTGA AAGAAAAGAC TGATTCTATC
AAGCCGACGA CGCCCAAGAA AAATGTGTTC CAGCGAATCC AAAGCAGCGT GCAGCGTATG
AATCGAGGCC GTGCAAAAGG ACACTTTCGA CCCGAGACGC AAAAGAAGAA ACGCGGTCGA
CGCAGTCTCT GACAGTGTAC AAA
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| Protein sequence | MSKKRNAKKR RREQRRQMEE HSRLTNDSFQ DQQRATSTNK HSKGDGAPPS FDKSRSVNSS
SLPTAVDGFG SQKRSIAAIQ FVYPERNGRK LYRFQKELLD TFIVPPQEKI EKGLPEFVAT
NVSLNDILYP DSNREKQSDS GSQLKGDSSQ KSPKILHGEH HTNNVVKELR QKNLDVQSLS
GQSQGQLSGM SVEDAVRDKL GCRPRANSTD GELNLPQRGL CDERKVLESF KWIPTNVNLS
YPKGFVNLGN TCFLNSTVQC LAYLPPFCQS LLSILSHESK HGEKRKTSQG RKVTFILRSL
FSQVHGIDGG TTHSGSSLAP RAIVQAVPTL GSCGSRKGYK FRPGRQEDAH EFLVHLLDAM
NDGELKEAGI NQNASGWRDR LPIPRLDETT FIHRIFGGYF RSQVRCTSCN NRSNTYDPLL
NLSLEVSRKA CNSVAQALHE FTRKETLDSQ NQWKCSGCKK YVCATKQLTV FRPPLSLCIQ
LKRFTYSGRL KFSVGFGSFG NGGGGQKISK SIEFPAQLKL PLSDGRSCGY SLTGIVIHVG
GSASSGHYTA YVRKPGGGSK SQWFHMDDSF VEAVSEQTVL RQRDAYLLFY CREEVKLEFP
TPPMSAKEAQ ELGRAKARAR ADSLTELQAS ASTSLITITS KSLCHESTAA LEQKRKVNRV
EENSNGTVAS FPPNLRKQEQ NENGDLLEKQ RNETSFSAPG KKTDSAELLP TPITAPDFGF
EIQRSSVKQF SRRSPDPSKV VVSSKSQRER YGGNIQLGQS PMMKPAIALP DQGEESSSEE
SSPSDDSSVQ DQNDSTSSAR ISLPVIKSEA KTSFADVSSS SENEEKAFRT INMTESESPH
AVQKKALEKP RTRIVLDRGE GREKVEVMMG PRSETKAWTP RAGAVTKSED YALLGNQRVG
RWDDEGNDVA TRQHDRGREN LIQQMDKKES NRKRKMYLDR WDAMLDQGQT KKVKEKTDSI
KPTTPKKNVF QRIQSSVQRM NRGRAKGHFR PETQKKKRGR RSL
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