Gene PHATRDRAFT_42606 details

Gene Information

• Locus tag: PHATRDRAFT_42606
• ID: 7196288
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 562977
• End bp: 564968
• Gene Length: 1992 bp
• Protein Length: 630 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002176608
• Protein GI: 219109708

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.703916
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAATTACCTG GTGGCATTTT GTGTTGTAAT TACTGGTTGA CATGAAGTCA ACGACAAAGT 
TATGCTTTGC CATACTCGGA GCTCTGTTGA TTCCTCCGGT AGAAGCCGCG GCCTCGGAGG 
GCGACGAGCC GACCTCCTGT CGATTATGGC TCGCCCCTTC GGCCGTATCC ACGGACCGCA 
AACCCAAATT TGGTTTATTT GCGGGTGCTA CGTACTCGAT GGATGACATT ATTCCTCTCT 
CAGAGTTGGC TATTCCTCTG TCAGACTTTA TGGAATACCC GAATCGCGCC CGATCGCAGT 
ACGATAGCGA TATTCTGGAC TTTGTTCAGT CTTTTGTGTG GACTTCGGAA TATGCCGGAG 
GTCGTTGGGA GGGCAATTAC AGTTCGACTG TGTTTGTCCC AGGAATCGGA ATTTTGTCCA 
ACTATCACAC GGGTCACTCT AATGTTGATT GGCTGCAAGG GTCGGTACTG AAACGCGAGC 
GCAATGCGTT CACACTCCCG GGCATTGCCC CATCCTTCTC GGGGAGCCAT TACACCTTAT 
TATAACATGA CGCTACGAGC GATCCGTACG ATTCCGGCTG GCATGGAACT CTTCGCGAAT 
TTTGGAGAGC AGTGGGACGG AAGTTTTGGC GACGACGCGT TTCAGGATAA GTTGACTCGG 
TGGGAGTATC AAGATGCGGA CAAGCTTTTG GACAAGATTG TCGACTTTAT GGACCAGTTT 
GGTGACCAAA TGAGCGAGAC TTTGAAGGAT GATGTTCTAG ACTTTATGCT GGAAAAGGTA 
CTGGGAACAG CCACAGGAAA GCGCGCCAAG ATTATTAAAT CCTTAATTCC TGCGCATCCA 
CAAAAACTTC AGCGAGTATT GGATGCCGGT GGGACCTTTG TTTACCGCAA TCGGGATTTA 
GTCAAAAGTC CCCGATGGTT GGAAGACAAT GGCATCTGTG TTGACAAGAT GCGTGGTGAC 
ACGAGTACCA TTCCTGATGC GGGACGAGGT GCCTTTGCTA CTCGAAAAAT TGCCAAGGAT 
GAACTAATTG TTCCCGTACC TATGATTCCG GTTGGTAACA AGGCCCTAAT GGATATGTAC 
GAATTTGTCG AAAACCATGA TGAAGAAGGG CGTCCAACGG GTCTCACTTA CAACTTTGAG 
AAATATCGCG GGCAGCAGCT CCTGGTGAAC TATTGCTTTG GCCATCCAGA GTCAAGCCTT 
TTGCTTATGC CAGTTGGCCC CTTGGCAACC TTGATCAATC ACGGGAGTCT CCGTGACAAG 
GCAAACGCTT ACCTCACTTG GTCTAAGCAC ACGAGCGTTT GGAATGACCA CAGTCTACAT 
GACCTGCATG TGCACGAAGT GATGAATCAA GAGTATCCGA ACATTGTCAT GGAAATCTAC 
GCAATTCGAG ATATCGAAGA AGGCGAGGAA ATATTCATCG ACTATGGTGC TGCATGGGAA 
CAGGCCTGGG TCGAGTACAA GGAAAATTGG CAAGCCAGTA CGCTCGACGG CAAATGGCCG 
CTCAAGGCCG AAGATATGAA CAGCATCTTC CTAACGAAAC CATTTCCGAT CAATTTACAA 
CAAGACAGCA GCCCATACCC GGATGGTGTC GCCACTGCCT GTTACATCTA CATAGGAGAA 
CAAACAGACG GAGAGGCGCA CGAAAACGAA GATGGTTTGT CGATTTTTCC GTGGATCGGA 
CCGAAATCCT TCGAAGACTA TGTTGGACAA GTCTTGACGG TGTGTGATCT CCGCGGGCGG 
GAAGAGAGCG TAGAACACGG CTTCGTCTAC ATGGTCCGCG CGCGTCTTCC GGGACAGGAC 
GAAGTAGTTG AAGTGAAGGG TGTACCGCAC GTCGCAGTCA CTTTGGTAGA TCAACCGTAC 
CAAGCCGATC ACCATCGCCC TGGCGCCTTT CGGCATCCAA TTGCTGTAGA AGACCAGCGT 
TGGCCTCAAG CCTGGCGCGA TTTGCGTGGA TGAAGCAAGT TATGGATGAT CGTTGTTAAT 
GATACTGTTT GC 

 

Protein sequence

MKSTTKLCFA ILGALLIPPV EAAASEGDEP TSCRLWLAPS AVSTDRKPKF GLFAGATYSM 
DDIIPLSELA IPLSDFMEYP NRARSQYDSD ILDFVQSFVW TSEYAGGRWE GNYSSTVFVP 
GIGILSNYHT GHSNVDWLQG AMRSHSRALP HPSRGAITPY YNMTLRAIRT IPAGMELFAN 
FGEQWDGSFG DDAFQDKLTR WEYQDADKLL DKIVDFMDQF GDQMSETLKD DVLDFMLEKV 
LGTATGKRAK IIKSLIPAHP QKLQRVLDAG GTFVYRNRDL VKSPRWLEDN GICVDKMRGD 
TSTIPDAGRG AFATRKIAKD ELIVPVPMIP VGNKALMDMY EFVENHDEEG RPTGLTYNFE 
KYRGQQLLVN YCFGHPESSL LLMPVGPLAT LINHGSLRDK ANAYLTWSKH TSVWNDHSLH 
DLHVHEVMNQ EYPNIVMEIY AIRDIEEGEE IFIDYGAAWE QAWVEYKENW QASTLDGKWP 
LKAEDMNSIF LTKPFPINLQ QDSSPYPDGV ATACYIYIGE QTDGEAHENE DGLSIFPWIG 
PKSFEDYVGQ VLTVCDLRGR EESVEHGFVY MVRARLPGQD EVVEVKGVPH VAVTLVDQPY 
QADHHRPGAF RHPIAVEDQR WPQAWRDLRG