Gene PHATRDRAFT_42590 details

Gene Information

• Locus tag: PHATRDRAFT_42590
• ID: 7195963
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 517393
• End bp: 519486
• Gene Length: 2094 bp
• Protein Length: 634 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002176598
• Protein GI: 219109688

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGTTATCGA TCTTTTACAT TGGCAAGTTT TCTTGGTTCC GCCATTGCAA CGTTCTAAAG 
ATGCGCTTTC CTATTCTGAC CACAATAGTC ATTGCCTCGT TGGGTTGGAA TCACCAAGCT 
TGCACCAAAG CGGAAGAGAC CAACGCGAGC GAGGCGGAGA CCTGTGGCTT GTATCTGGCA 
GTGTCGTCCA CTTCTACCGC GGAAGAAACC AACTGGGGAT TGTATTCGGG ACGCGATCTC 
GCTCCCCGTG TATCCGTTGG TTTCCCGGAT GTGGGGATCA ATATGATCAA TCTGCGAGCT 
CACGGCGTGC CGACGGATGC AGAGAACGAC CGCAATACAC TTCTATCCCG GACCGTCGAC 
TTCTTGGAGA GCTTTGTGTG GGTTCCGGAT CCGGCGGGTG CCAAGTTTGA AGTCCAGAAC 
GGCAAGATCA TTACAGCTAT TGCTGGAGCC GGAGTTCTCG GTGGATTTAA CGTCAAACTC 
ACCAACGCCA ACTGGAAACA TTCCGCAGCC TATCGCCGTC CCCGTTTGGA GCACGAAAAT 
GATGTGGAAA AGAATCATCC TGGTCGGGGT GCCAGTACCC CCTTTTACAA CGTCATGCTC 
GAGTCTTCCA CGGAAATTTC GCAAGGATCA GAAATTTTTG TGGATTATGG AGATAATTGG 
GAAGACGAAG ACAAGGAGCA CGAACTCACC AAGGACGAAT ACAAGAAACT CGACGAAACG 
GTCGTCAAAA TGGTTAACTT TTTCGAAAAA CACAAGGAAG AGTTGGACGC CGACTCGAAA 
CAAGAAATAT TCCAATTTTT GATGCAGGAT GTCTTATCGG CAGCCATTGG ACCCGACAAG 
GCGCATAAAG TAGGCACTTT GTTGCCTACC GTCCCTGACG AACTCCCCAG AGTAGTCGAG 
GCCGGTGGGT CGTTAGCCTA TAGCGACCCC ACCATTTACC GTAAACTGGA ATGGCTCGAT 
GAACACGGAC GTTGCATGGA TAATATCAAG GCGGGGGCAT CCAACATCTC CTACGCGGGC 
CGTGGAGCTA TGGCGACACG GGCCATAAAA CAAGGCTCTC TCGTGGCACC CGTACCCTTA 
ATTCAAGTTC CCGACCGAGC AGTCTTCAAC ATGTACAACC TGCAACTCTC TGAAGACGGC 
GAAACGTACA TACGGACATC GGACGATATC GTTGGAGAAC AAATGATTAT CAATTACAGT 
TTCGGACACA AGGATTCAAG TTTGGTGTTT GTACCGGCTG GTGCCATTGT TAATCTTATC 
AACCATGGCG ATACTCCCAA TGCTAAAATG GTTTGGTCCA CGCATCCCAG CCACCGAAAG 
ATGTGGCTCA ACTTCAAGCC GGAGACTCTG CTGGATGATG AACAAATGTA TACTGGCTTA 
TTGATGGAAA TTGTTGCGAC TCGCGACATT GAGCCGGGCG AAGAAATTTT GCTGGACTAC 
GGACCAGAGT GGAAAGCGGC GTGGGACGCG CACGTGGAAA GTTGGAAAGG ACGATTGGCC 
AAGGGTGAAA TTTCCGAGAC TCGTGCGCCG ACGGCAGTCG ATCTAAATAC CAAGTACAGT 
GAGCAGCCCT ATCCCAGTGA ATCCGAGTTC GCCGCTCCCG AGAATGTTTG TCTCAAAGCG 
TCATTGTCAG TGGAAGAGTC CGATGCCACC GGAACATTGG AGAATCCCAA AACTTGGGCA 
ACCCCAGACG AATTTGCAAA TTTAAACCCA GACACATTGG TCAACATGCA TGTGGTGGAA 
AGTAGAAAAG TGGAGGATGA AGAAGATGGA GACGAGCCTT TTCGATACGT TGTCAAGTGG 
GCAAACAATA ATGGCGAACT TACGTTCGTA AAGGAGGTTC CACACAGCGC CATTGCCTTT 
GTGGACATGC CCGGAATGAG TGACGCCTTT ACTGAGGGCG CCTTCCGGCA CGTAATCGGT 
ATTCCGGACG ATATCTTCCC CAAAGCTTGG CGCAACCGCA AATAGGACTA CCAAGTCTTG 
ATCGCGATAG AAAACGTGTG CCCTTTCATT GCTTTTTTCA GTTAAGTAGT TTTATGATAG 
TACAAACGCA GCACCTACTG CACTACCGTA TAGCATCGAT ACGCCAAATT ATCA 

 

Protein sequence

MRFPILTTIV IASLGWNHQA CTKAEETNAS EAETCGLYLA VSSTSTAEET NWGLYSGRDL 
APRVSVGFPD VGINMINLRA HGVPTDAEND RNTLLSRTVD FLESFVWVPD PAGAKFEVQN 
GKIITAIAGA GVLGGFNVKL TNANWKHSAA YRRPRLEHEN DVEKNHPGRG ASTPFYNVML 
ESSTEISQGS EIFVDYGDNW EDEDKEHELT KDEYKKLDET VVKMVNFFEK HKEELDADSK 
QEIFQFLMQD VLSAAIGPDK AHKVGTLLPT VPDELPRVVE AGGSLAYSDP TIYRKLEWLD 
EHGRCMDNIK AGASNISYAG RGAMATRAIK QGSLVAPVPL IQVPDRAVFN MYNLQLSEDG 
ETYIRTSDDI VGEQMIINYS FGHKDSSLVF VPAGAIVNLI NHGDTPNAKM VWSTHPSHRK 
MWLNFKPETL LDDEQMYTGL LMEIVATRDI EPGEEILLDY GPEWKAAWDA HVESWKGRLA 
KGEISETRAP TAVDLNTKYS EQPYPSESEF AAPENVCLKA SLSVEESDAT GTLENPKTWA 
TPDEFANLNP DTLVNMHVVE SRKVEDEEDG DEPFRYVVKW ANNNGELTFV KEVPHSAIAF 
VDMPGMSDAF TEGAFRHVIG IPDDIFPKAW RNRK