| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42548 |
|---|
| Symbol | |
|---|
| ID | 7196254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011669 |
|---|
| Strand | - |
|---|
| Start bp | 385208 |
|---|
| End bp | 386280 |
|---|
| Gene Length | 1073 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177081 |
|---|
| Protein GI | 219110659 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0379002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGG TGAGACTTGT GTCGCTTTTG TTGGTGTTGT CGACAGCCAA CAGCTTTCTA
GCACGACTTT CCAGTACAAG GAATCGTAAC GAGGTTGCTG TGGCTTGTCG GAGCGAACCG
GAAACTAGCA ATTACTGGGG AGATGACACT GATGACCAGG ATACCCTCCA GCCCAGCTTG
ACGCCTCTGT CGTCGTTCGC GGCGTCTCCC GCCTTGTTTG AGCTAGATCC GGCTTCAGAC
CAAGCTAGAG ATATCGTCAT GAACGATTTG AAACTCTCTG GTGCCCAACA CGAACAACTG
GTGTCGTTGT GTCAAGCCGT TGTGGACTGG AACGACCGAA TAAATTTGGT TTCGCGGAAG
GATTGCACGG TGGCAACCGT ATTTGGCCGG CACGTACTAC CTTCCATTGC CTGCTGTGCC
TTTTCAGAAG ATCAAAATCC CTTAAACACT GCTAAAACAC TGGTCGACGT TGGCACGGGC
GGTGGCTTTC CCGGATTGCC GTTGGCGATT GCCTATCCCG ACGTTCAGTT TGTCCTCCTT
GACAGTGTAG GCAAGAAACT GACTGCGGCC CAAGACATGG CAAACGCTCT GGGACTCGAC
CACGTTCGTA CACATCACGG GCGTGCCGAA GATTTACGGG ACGAGGTCTT CGATGTCGCC
ACGGGTCGTA GTGTGTCGGC CATCCCACAA TTTTGTGCGT GGATGCAGCA TTTGGTCAAA
CCCACGGGGC ATCTTCTCTA CTGGATTGGC GGCGACGTCG ACGCGAGTAT TCTGGAACAA
ACTGTTTCGG ATACCCCCAT CGAGTCGCTA GTACCCGACA TGGAATCGGA TAAGAGAATA
TTAATACTCC CCCAGCTTGC TGTGAAGAGG ATCGCCAAGG CTAGTGGAAT TTCTGTGCAA
CCGTCACCAA CCAATCGATC ACAAAGAAAG CGCCCATCGT CCCAGAGAAA GACGACAGCC
AAAGGATCTT GGAGCCGCCG AAACTCGGAA GAGCCCAAGC AGCGCGGCTA CGAAGGCTTC
AAGCGGTATT CTAGCTCGTA ACCTACTTTT ACGATACCAG GACAACAAAA CCC
|
|---|
| Protein sequence | MSTVRLVSLL LVLSTANSFL ARLSSTRNRN EVAVACRSEP ETSNYWGDDT DDQDTLQPSL
TPLSSFAASP ALFELDPASD QARDIVMNDL KLSGAQHEQL VSLCQAVVDW NDRINLVSRK
DCTVATVFGR HVLPSIACCA FSEDQNPLNT AKTLVDVGTG GGFPGLPLAI AYPDVQFVLL
DSVGKKLTAA QDMANALGLD HVRTHHGRAE DLRDEVFDVA TGRSVSAIPQ FCAWMQHLVK
PTGHLLYWIG GDVDASILEQ TVSDTPIESL VPDMESDKRI LILPQLAVKR IAKASGISVQ
PSPTNRSQRK RPSSQRKTTA KGSWSRRNSE EPKQRGYEGF KRYSSS
|
|---|
| |